BLASTX nr result

ID: Coptis23_contig00025721 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025721
         (606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280477.2| PREDICTED: CWF19-like protein 2-like [Vitis ...   173   2e-41
ref|XP_002526391.1| nucleic acid binding protein, putative [Rici...   173   2e-41
ref|XP_002319799.1| predicted protein [Populus trichocarpa] gi|2...   169   3e-40
gb|AAG50922.1|AC069159_23 unknown protein [Arabidopsis thaliana]      164   1e-38
ref|XP_002891949.1| hypothetical protein ARALYDRAFT_892793 [Arab...   164   1e-38

>ref|XP_002280477.2| PREDICTED: CWF19-like protein 2-like [Vitis vinifera]
            gi|297737179|emb|CBI26380.3| unnamed protein product
            [Vitis vinifera]
          Length = 810

 Score =  173 bits (438), Expect = 2e-41
 Identities = 80/103 (77%), Positives = 95/103 (92%), Gaps = 1/103 (0%)
 Frame = -2

Query: 605  EEWSQHNAKKLIDTSVKGLHGSIPKDFPYFHVEFGLHKGFVHVIDDENQFKSSFGLNVIR 426
            +EWSQHNAKKLIDTS KGL GSIPKDFPYFHVEFGL+KGFVHVIDDE QFKSS GL+VIR
Sbjct: 708  DEWSQHNAKKLIDTSEKGLRGSIPKDFPYFHVEFGLNKGFVHVIDDEKQFKSSLGLDVIR 767

Query: 425  GMLQLPQED-NRLRKHESFEAQRKRVLSFAQEWEPFDWTKELD 300
            GML+LP+ED +R R+HES EAQ++ V++FA++WEPFDWTK+L+
Sbjct: 768  GMLRLPEEDMHRRRRHESAEAQKQAVVNFARDWEPFDWTKQLE 810


>ref|XP_002526391.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223534253|gb|EEF35967.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 726

 Score =  173 bits (438), Expect = 2e-41
 Identities = 81/103 (78%), Positives = 92/103 (89%), Gaps = 1/103 (0%)
 Frame = -2

Query: 605 EEWSQHNAKKLIDTSVKGLHGSIPKDFPYFHVEFGLHKGFVHVIDDENQFKSSFGLNVIR 426
           +EWSQHNAKKLIDTS KGL GSIPKDFPYFHVEFGL+KGFVHVIDDE QFKSS GLNVIR
Sbjct: 624 DEWSQHNAKKLIDTSQKGLRGSIPKDFPYFHVEFGLNKGFVHVIDDEQQFKSSLGLNVIR 683

Query: 425 GMLQLPQED-NRLRKHESFEAQRKRVLSFAQEWEPFDWTKELD 300
           GML+LP+ED  R R+HES + Q++ V +FA+EWEPFDWTK+LD
Sbjct: 684 GMLRLPEEDMYRRRRHESVDLQKQAVANFAREWEPFDWTKQLD 726


>ref|XP_002319799.1| predicted protein [Populus trichocarpa] gi|222858175|gb|EEE95722.1|
           predicted protein [Populus trichocarpa]
          Length = 275

 Score =  169 bits (428), Expect = 3e-40
 Identities = 80/102 (78%), Positives = 88/102 (86%), Gaps = 1/102 (0%)
 Frame = -2

Query: 605 EEWSQHNAKKLIDTSVKGLHGSIPKDFPYFHVEFGLHKGFVHVIDDENQFKSSFGLNVIR 426
           +EWSQHNAKKLIDTS KGL GSIPKDFPYFHVEFGL KGFVHVIDDE  FKSS GLNV+R
Sbjct: 174 DEWSQHNAKKLIDTSEKGLRGSIPKDFPYFHVEFGLSKGFVHVIDDEKNFKSSLGLNVLR 233

Query: 425 GMLQLPQED-NRLRKHESFEAQRKRVLSFAQEWEPFDWTKEL 303
           GML+LP+ED  R R+HES EAQ+  V  FAQ+WEPFDWTK+L
Sbjct: 234 GMLRLPEEDMYRRRRHESVEAQKLAVAKFAQDWEPFDWTKQL 275


>gb|AAG50922.1|AC069159_23 unknown protein [Arabidopsis thaliana]
          Length = 807

 Score =  164 bits (414), Expect = 1e-38
 Identities = 78/102 (76%), Positives = 88/102 (86%), Gaps = 1/102 (0%)
 Frame = -2

Query: 602  EWSQHNAKKLIDTSVKGLHGSIPKDFPYFHVEFGLHKGFVHVIDDENQFKSSFGLNVIRG 423
            EWSQHNAKKLIDTSVKGL  SIPK+FPYFHVEFGL KGFVHVIDDE QF S+ GLNVIRG
Sbjct: 706  EWSQHNAKKLIDTSVKGLRNSIPKNFPYFHVEFGLDKGFVHVIDDEQQFNSNLGLNVIRG 765

Query: 422  MLQLPQED-NRLRKHESFEAQRKRVLSFAQEWEPFDWTKELD 300
            ML+LP+ED  R R+ ES E+Q+K V +FA+EWE FDWTK+LD
Sbjct: 766  MLELPEEDMYRRRRQESVESQKKAVATFAREWEHFDWTKQLD 807


>ref|XP_002891949.1| hypothetical protein ARALYDRAFT_892793 [Arabidopsis lyrata subsp.
           lyrata] gi|297337791|gb|EFH68208.1| hypothetical protein
           ARALYDRAFT_892793 [Arabidopsis lyrata subsp. lyrata]
          Length = 691

 Score =  164 bits (414), Expect = 1e-38
 Identities = 78/102 (76%), Positives = 88/102 (86%), Gaps = 1/102 (0%)
 Frame = -2

Query: 602 EWSQHNAKKLIDTSVKGLHGSIPKDFPYFHVEFGLHKGFVHVIDDENQFKSSFGLNVIRG 423
           EWSQHNAKKLIDTSVKGL   IPK+FPYFHVEFGL KGFVHVIDDE QF S+ GLNVIRG
Sbjct: 590 EWSQHNAKKLIDTSVKGLRNCIPKNFPYFHVEFGLDKGFVHVIDDEQQFNSNLGLNVIRG 649

Query: 422 MLQLPQED-NRLRKHESFEAQRKRVLSFAQEWEPFDWTKELD 300
           ML+LP+ED  R R+ ES E+Q+K V+SFA+EWE FDWTK+LD
Sbjct: 650 MLELPEEDMYRRRRQESVESQKKAVVSFAREWEHFDWTKQLD 691


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