BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025706
         (598 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327176.1| f-box family protein [Populus trichocarpa] g...   231   6e-59
ref|XP_002510165.1| skip-2, putative [Ricinus communis] gi|22355...   228   6e-58
ref|XP_002284998.1| PREDICTED: F-box protein At1g47056 [Vitis vi...   226   2e-57
emb|CAN59800.1| hypothetical protein VITISV_038872 [Vitis vinifera]   223   3e-56
ref|XP_003544473.1| PREDICTED: F-box protein At1g47056-like [Gly...   222   3e-56

>ref|XP_002327176.1| f-box family protein [Populus trichocarpa]
           gi|222835491|gb|EEE73926.1| f-box family protein
           [Populus trichocarpa]
          Length = 534

 Score =  231 bits (590), Expect = 6e-59
 Identities = 119/199 (59%), Positives = 140/199 (70%), Gaps = 1/199 (0%)
 Frame = -1

Query: 598 IDGWKTNRIGDEGFIAIARQCPKLQELVLIGVSPTKLSLGLLG-NCRNLERLALCSSETI 422
           +DGWKTNRIGD+G  A+A+ CP LQELVLIGV+PTK+S+ LL  NC+NLERLALC S+T+
Sbjct: 329 VDGWKTNRIGDDGLSAVAKYCPNLQELVLIGVNPTKISVELLASNCQNLERLALCGSDTV 388

Query: 421 GDSEISCIAAKCVALKKLCIKGCPITNHAMEALVAGCPNLXXXXXXXXXXXXXXXXVWLR 242
           GD+EISCIAAKCVALKKLCIK CP+++H MEAL  GCPNL                 WLR
Sbjct: 389 GDAEISCIAAKCVALKKLCIKSCPVSDHGMEALANGCPNLVKVKVKKCRAVTCECADWLR 448

Query: 241 TFRQSLAVNLDVGASENLDASTSDGGPAEIGAETPQGVNQIAGSADIASGSNGRSSLSKA 62
           T R SLAVNLD G  E+ DAS SDGG  E   E     NQ+     IAS S GRS+  K+
Sbjct: 449 TKRGSLAVNLDCGEPEHQDASASDGGLLENVVEFHSVANQMP-LPSIASSSTGRSTSFKS 507

Query: 61  RLGIFAGRKFAACTFRRWS 5
           RLG+ +G+   ACTFRRWS
Sbjct: 508 RLGLLSGKNLVACTFRRWS 526


>ref|XP_002510165.1| skip-2, putative [Ricinus communis] gi|223550866|gb|EEF52352.1|
           skip-2, putative [Ricinus communis]
          Length = 536

 Score =  228 bits (581), Expect = 6e-58
 Identities = 114/200 (57%), Positives = 138/200 (69%), Gaps = 1/200 (0%)
 Frame = -1

Query: 598 IDGWKTNRIGDEGFIAIARQCPKLQELVLIGVSPTKLSLGLLG-NCRNLERLALCSSETI 422
           IDGWK NRIGD+G IA+A+ CP LQELVLIGV+PTK SL +L  NC+NLERLALC S+T+
Sbjct: 330 IDGWKANRIGDDGLIAVAKNCPNLQELVLIGVNPTKSSLEMLASNCQNLERLALCGSDTV 389

Query: 421 GDSEISCIAAKCVALKKLCIKGCPITNHAMEALVAGCPNLXXXXXXXXXXXXXXXXVWLR 242
           GD+EISCIAAKC++LKKLCIK CP+++H MEAL +GCPNL                 WLR
Sbjct: 390 GDAEISCIAAKCISLKKLCIKSCPVSDHGMEALASGCPNLVKVKVKKCRGVTCEGADWLR 449

Query: 241 TFRQSLAVNLDVGASENLDASTSDGGPAEIGAETPQGVNQIAGSADIASGSNGRSSLSKA 62
             R SLAVNLD G  E+ DAS SDGG  E   E P G       +  +S + GRS+  K+
Sbjct: 450 ASRGSLAVNLDSGEHEHHDASASDGGVQENAVEIPPGQIAAVVPSVASSSTAGRSTSFKS 509

Query: 61  RLGIFAGRKFAACTFRRWSN 2
           RLG+ +GR   ACT RRWS+
Sbjct: 510 RLGLLSGRNLVACTLRRWSS 529


>ref|XP_002284998.1| PREDICTED: F-box protein At1g47056 [Vitis vinifera]
          Length = 541

 Score =  226 bits (576), Expect = 2e-57
 Identities = 117/200 (58%), Positives = 141/200 (70%), Gaps = 1/200 (0%)
 Frame = -1

Query: 598 IDGWKTNRIGDEGFIAIARQCPKLQELVLIGVSPTKLSLGLLG-NCRNLERLALCSSETI 422
           IDGWK NRIGDEG  A+A+ CP LQELVLIGV+PTKLSL +L  NC+NLERLALC+S+T+
Sbjct: 331 IDGWKANRIGDEGLSAVAKCCPNLQELVLIGVNPTKLSLEMLAANCQNLERLALCASDTV 390

Query: 421 GDSEISCIAAKCVALKKLCIKGCPITNHAMEALVAGCPNLXXXXXXXXXXXXXXXXVWLR 242
           GD+EISCIAAKC+ALKKLCIK CP+++  M AL  GCPNL                  LR
Sbjct: 391 GDAEISCIAAKCLALKKLCIKSCPVSDQGMRALACGCPNLVKVKVKKCRAVTYEGADGLR 450

Query: 241 TFRQSLAVNLDVGASENLDASTSDGGPAEIGAETPQGVNQIAGSADIASGSNGRSSLSKA 62
             R+SLAVNLD G +E+ DAS SDGG  E   E P   +Q  G+A+IAS S+GRS+  KA
Sbjct: 451 ASRESLAVNLDTGETEHQDASASDGGAQENAVELPPLASQ-NGAANIASSSSGRSNSLKA 509

Query: 61  RLGIFAGRKFAACTFRRWSN 2
           RLG+  GR   A T RRW++
Sbjct: 510 RLGLLTGRNLVASTLRRWTS 529


>emb|CAN59800.1| hypothetical protein VITISV_038872 [Vitis vinifera]
          Length = 1151

 Score =  223 bits (567), Expect = 3e-56
 Identities = 118/200 (59%), Positives = 136/200 (68%), Gaps = 1/200 (0%)
 Frame = -1

Query: 598 IDGWKTNRIGDEGFIAIARQCPKLQELVLIGVSPTKLSL-GLLGNCRNLERLALCSSETI 422
           IDGW+TNRIGDEG IA+A+QC  LQELVLIGV+PT  S+  +  NC+ LERLALC S+TI
Sbjct: 356 IDGWRTNRIGDEGLIAVAKQCTNLQELVLIGVNPTSSSITAVASNCQKLERLALCGSQTI 415

Query: 421 GDSEISCIAAKCVALKKLCIKGCPITNHAMEALVAGCPNLXXXXXXXXXXXXXXXXVWLR 242
           GD EIS IAAKC AL+KLCIKGCPI++H MEAL  GCPNL                  LR
Sbjct: 416 GDKEISSIAAKCTALRKLCIKGCPISDHGMEALAWGCPNLVKVKVKKCPGVTCEAVDSLR 475

Query: 241 TFRQSLAVNLDVGASENLDASTSDGGPAEIGAETPQGVNQIAGSADIASGSNGRSSLSKA 62
             R++L VNLD  A E LDASTSDGG  E G E P  V+Q+    D  SGSNG S+L K+
Sbjct: 476 ARREALIVNLDAVAVETLDASTSDGGAQEDGQEPPPMVSQVT-VVDGPSGSNGLSALFKS 534

Query: 61  RLGIFAGRKFAACTFRRWSN 2
           + G FAGR   AC F RWSN
Sbjct: 535 KFGHFAGRNLVACAFGRWSN 554


>ref|XP_003544473.1| PREDICTED: F-box protein At1g47056-like [Glycine max]
          Length = 549

 Score =  222 bits (566), Expect = 3e-56
 Identities = 116/199 (58%), Positives = 135/199 (67%), Gaps = 1/199 (0%)
 Frame = -1

Query: 598 IDGWKTNRIGDEGFIAIARQCPKLQELVLIGVSPTKLSLGLLG-NCRNLERLALCSSETI 422
           IDGWK NRIGDEG IA+A+ CP L ELVLIGV+PTK SL +L  NCRNLERLALC S+++
Sbjct: 342 IDGWKANRIGDEGLIAVAKGCPNLLELVLIGVNPTKASLEMLASNCRNLERLALCGSDSV 401

Query: 421 GDSEISCIAAKCVALKKLCIKGCPITNHAMEALVAGCPNLXXXXXXXXXXXXXXXXVWLR 242
           GD+EISCIAAKCVALKKLCIK CP+++  MEAL  GCPNL                 WLR
Sbjct: 402 GDTEISCIAAKCVALKKLCIKSCPVSDQGMEALANGCPNLVKVKVKKCKGVTPEGGDWLR 461

Query: 241 TFRQSLAVNLDVGASENLDASTSDGGPAEIGAETPQGVNQIAGSADIASGSNGRSSLSKA 62
             R S+AVNLD G +E  +AS SDGG  +   E PQ   QI  +A  AS S  RSS  K 
Sbjct: 462 RTRGSVAVNLDTGEAELQEASASDGGAQDNVVEFPQMPAQIVAAAASASSSTTRSSSFKL 521

Query: 61  RLGIFAGRKFAACTFRRWS 5
           RLG+ +GR   A TF+RWS
Sbjct: 522 RLGLLSGRSLVASTFKRWS 540