BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025702
         (979 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35869.3| unnamed protein product [Vitis vinifera]              459   e-127
ref|XP_002273108.1| PREDICTED: nodulation-signaling pathway 1 pr...   459   e-127
ref|XP_002299589.1| GRAS family transcription factor [Populus tr...   437   e-120
ref|XP_002521327.1| Nodulation signaling pathway 1 protein, puta...   436   e-120
gb|ADL36817.1| SCL domain class transcription factor [Malus x do...   434   e-119

>emb|CBI35869.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score =  459 bits (1180), Expect = e-127
 Identities = 221/311 (71%), Positives = 252/311 (81%), Gaps = 1/311 (0%)
 Frame = +3

Query: 48   PITFTSTDPRLFQRSLLKFCEISPWFTFPNTVANASILQILGQEKDSSRSLHIVDIGVSH 227
            PITF+ST+PR FQRSLLKF E+SPWF FPN +AN SILQIL      SR+LHI+DIGVSH
Sbjct: 180  PITFSSTEPRFFQRSLLKFYEVSPWFAFPNNIANTSILQILNGVPSRSRNLHILDIGVSH 239

Query: 228  GLQWPTLLEALSHQSGGQPALVRLTIVADSSAQNNGIAAPFSKGPIGDNFASRLLRFAKS 407
            G+QWPTLLEALS +SGG P LVRLT++A +S  +     PFS  P GDNF++RLL FAKS
Sbjct: 240  GVQWPTLLEALSRRSGGPPPLVRLTVIAATSDNDQNTETPFSIAPPGDNFSARLLSFAKS 299

Query: 408  XXXXXXXXXXX-HPLQALNPQTLNTSPNETLIVCAQFRLHCLNHTTPDDRMAFLKVMRSL 584
                        HPLQ+L+PQ ++TSP+ETLIVCAQFRLH LNH TPD+R  FLKV+R L
Sbjct: 300  MNINLQINRLDNHPLQSLSPQLIDTSPDETLIVCAQFRLHHLNHNTPDERTEFLKVLRKL 359

Query: 585  EPKAVVLCENDMSCSCNQCGDFTTGFSKRFEYLWRFLDSTSTAFKGRECEERRVMEGEAA 764
            EP+AV+L EN+M CSC  CGDF TGFS+R EYLW+FLDSTS AFKGRE EERRVMEGEAA
Sbjct: 360  EPEAVILSENNMDCSCTNCGDFATGFSRRIEYLWKFLDSTSAAFKGRESEERRVMEGEAA 419

Query: 765  TALINTLEMNEGKEKWCEKMRGVGFAGEVFGEDAIDGARALLRKYDSNWEMRIDERDGCV 944
             AL N  EMNEGKEKWCE+MRGVGFAGEVFGEDAIDGARALL+KYDSNWEMR++E+DGCV
Sbjct: 420  RALTNPGEMNEGKEKWCERMRGVGFAGEVFGEDAIDGARALLKKYDSNWEMRVEEKDGCV 479

Query: 945  CLWWKSQPVSF 977
             LWWK  PVSF
Sbjct: 480  GLWWKGLPVSF 490


>ref|XP_002273108.1| PREDICTED: nodulation-signaling pathway 1 protein [Vitis vinifera]
          Length = 545

 Score =  459 bits (1180), Expect = e-127
 Identities = 221/311 (71%), Positives = 252/311 (81%), Gaps = 1/311 (0%)
 Frame = +3

Query: 48   PITFTSTDPRLFQRSLLKFCEISPWFTFPNTVANASILQILGQEKDSSRSLHIVDIGVSH 227
            PITF+ST+PR FQRSLLKF E+SPWF FPN +AN SILQIL      SR+LHI+DIGVSH
Sbjct: 221  PITFSSTEPRFFQRSLLKFYEVSPWFAFPNNIANTSILQILNGVPSRSRNLHILDIGVSH 280

Query: 228  GLQWPTLLEALSHQSGGQPALVRLTIVADSSAQNNGIAAPFSKGPIGDNFASRLLRFAKS 407
            G+QWPTLLEALS +SGG P LVRLT++A +S  +     PFS  P GDNF++RLL FAKS
Sbjct: 281  GVQWPTLLEALSRRSGGPPPLVRLTVIAATSDNDQNTETPFSIAPPGDNFSARLLSFAKS 340

Query: 408  XXXXXXXXXXX-HPLQALNPQTLNTSPNETLIVCAQFRLHCLNHTTPDDRMAFLKVMRSL 584
                        HPLQ+L+PQ ++TSP+ETLIVCAQFRLH LNH TPD+R  FLKV+R L
Sbjct: 341  MNINLQINRLDNHPLQSLSPQLIDTSPDETLIVCAQFRLHHLNHNTPDERTEFLKVLRKL 400

Query: 585  EPKAVVLCENDMSCSCNQCGDFTTGFSKRFEYLWRFLDSTSTAFKGRECEERRVMEGEAA 764
            EP+AV+L EN+M CSC  CGDF TGFS+R EYLW+FLDSTS AFKGRE EERRVMEGEAA
Sbjct: 401  EPEAVILSENNMDCSCTNCGDFATGFSRRIEYLWKFLDSTSAAFKGRESEERRVMEGEAA 460

Query: 765  TALINTLEMNEGKEKWCEKMRGVGFAGEVFGEDAIDGARALLRKYDSNWEMRIDERDGCV 944
             AL N  EMNEGKEKWCE+MRGVGFAGEVFGEDAIDGARALL+KYDSNWEMR++E+DGCV
Sbjct: 461  RALTNPGEMNEGKEKWCERMRGVGFAGEVFGEDAIDGARALLKKYDSNWEMRVEEKDGCV 520

Query: 945  CLWWKSQPVSF 977
             LWWK  PVSF
Sbjct: 521  GLWWKGLPVSF 531


>ref|XP_002299589.1| GRAS family transcription factor [Populus trichocarpa]
            gi|66947640|emb|CAJ00014.1| Nodulation Signaling Pathway
            1 protein homologue 1 [Populus trichocarpa]
            gi|222846847|gb|EEE84394.1| GRAS family transcription
            factor [Populus trichocarpa]
          Length = 556

 Score =  437 bits (1125), Expect = e-120
 Identities = 209/310 (67%), Positives = 246/310 (79%), Gaps = 1/310 (0%)
 Frame = +3

Query: 51   ITFTSTDPRLFQRSLLKFCEISPWFTFPNTVANASILQILGQEKDSSRSLHIVDIGVSHG 230
            ITF ST+P+ FQ+SLLKF E+SPWF FP+ +ANASILQ+L QE+D  R+LH++DIGVSHG
Sbjct: 232  ITFASTEPKFFQKSLLKFYEVSPWFAFPHNIANASILQVLAQEQDPRRNLHVLDIGVSHG 291

Query: 231  LQWPTLLEALSHQSGGQPALVRLTIVADSSAQNNGIAAPFSKGPIGDNFASRLLRFAKSX 410
            +QWPTLLEAL+ + GG P LVR+T++  +S  +     PFS GP GDNF+SRLL FAKS 
Sbjct: 292  VQWPTLLEALTRRPGGPPPLVRITVITAASENDQTTETPFSIGPPGDNFSSRLLGFAKSM 351

Query: 411  XXXXXXXXXX-HPLQALNPQTLNTSPNETLIVCAQFRLHCLNHTTPDDRMAFLKVMRSLE 587
                       H LQ L+ + ++T P+E LIVCAQFRLH LNH TPD+R  FL+V+R LE
Sbjct: 352  NINLQIKRLDNHSLQKLSGRIIDTKPDEALIVCAQFRLHHLNHNTPDERTEFLRVLRRLE 411

Query: 588  PKAVVLCENDMSCSCNQCGDFTTGFSKRFEYLWRFLDSTSTAFKGRECEERRVMEGEAAT 767
            PK V+L EN+M CSCN CGDF TGFS+R EYLWRFLDSTS+AFKGRE  ERR+MEGEAA 
Sbjct: 412  PKGVILTENNMDCSCNSCGDFATGFSRRVEYLWRFLDSTSSAFKGRESVERRMMEGEAAK 471

Query: 768  ALINTLEMNEGKEKWCEKMRGVGFAGEVFGEDAIDGARALLRKYDSNWEMRIDERDGCVC 947
            AL N  EMNEGKEKWCE+MRGVGF GE+FGEDAIDGARALLRKYDSNWEMR + +DGCV 
Sbjct: 472  ALTNRGEMNEGKEKWCERMRGVGFVGELFGEDAIDGARALLRKYDSNWEMRGEGKDGCVG 531

Query: 948  LWWKSQPVSF 977
            LWWK QPVSF
Sbjct: 532  LWWKGQPVSF 541


>ref|XP_002521327.1| Nodulation signaling pathway 1 protein, putative [Ricinus communis]
            gi|223539405|gb|EEF40995.1| Nodulation signaling pathway
            1 protein, putative [Ricinus communis]
          Length = 548

 Score =  436 bits (1122), Expect = e-120
 Identities = 209/310 (67%), Positives = 244/310 (78%), Gaps = 1/310 (0%)
 Frame = +3

Query: 51   ITFTSTDPRLFQRSLLKFCEISPWFTFPNTVANASILQILGQEKDSSRSLHIVDIGVSHG 230
            ++FTS DP+ FQRSLLKF E+SPWF FPN +AN+SILQ+L QE D  R+LHI+DIGVSHG
Sbjct: 227  VSFTSIDPKFFQRSLLKFYEVSPWFAFPNNIANSSILQVLAQELDHKRNLHILDIGVSHG 286

Query: 231  LQWPTLLEALSHQSGGQPALVRLTIVADSSAQNNGIAAPFSKGPIGDNFASRLLRFAKSX 410
            +QWPTLLEAL+ +SGG P LVR+T++  +   +     PFS GP GDNF+SRLL FAKS 
Sbjct: 287  VQWPTLLEALTRRSGGPPPLVRITVITATVESDQNTETPFSVGPPGDNFSSRLLNFAKSL 346

Query: 411  XXXXXXXXXX-HPLQALNPQTLNTSPNETLIVCAQFRLHCLNHTTPDDRMAFLKVMRSLE 587
                       HPLQ+LN Q +NT+P +TL+VCAQFRLH LNH  PD+R  FLKV+RSLE
Sbjct: 347  NINLQINRLDNHPLQSLNAQVINTNPEDTLVVCAQFRLHHLNHNNPDERTEFLKVLRSLE 406

Query: 588  PKAVVLCENDMSCSCNQCGDFTTGFSKRFEYLWRFLDSTSTAFKGRECEERRVMEGEAAT 767
            PK V+L EN+    C  CGDF TGFS+R +YLW+FLDSTS+AFKGRE EERRVMEGEAA 
Sbjct: 407  PKGVILSENNTD-RCQICGDFATGFSRRVDYLWKFLDSTSSAFKGRESEERRVMEGEAAK 465

Query: 768  ALINTLEMNEGKEKWCEKMRGVGFAGEVFGEDAIDGARALLRKYDSNWEMRIDERDGCVC 947
            ALIN  EMN+GKEKWCE+MR  GF GEVFGED IDGARALLRKYDSNWEMR +E+DGCV 
Sbjct: 466  ALINCGEMNDGKEKWCERMRDSGFVGEVFGEDTIDGARALLRKYDSNWEMRTEEKDGCVG 525

Query: 948  LWWKSQPVSF 977
            LWWK QPVSF
Sbjct: 526  LWWKGQPVSF 535


>gb|ADL36817.1| SCL domain class transcription factor [Malus x domestica]
          Length = 552

 Score =  434 bits (1115), Expect = e-119
 Identities = 205/311 (65%), Positives = 245/311 (78%), Gaps = 1/311 (0%)
 Frame = +3

Query: 48   PITFTSTDPRLFQRSLLKFCEISPWFTFPNTVANASILQILGQEKDSSRSLHIVDIGVSH 227
            P+TFTST+PR FQ+SL+KF E+SPWF FPN +AN+SILQ++ +E D +R+LHIVD+GVSH
Sbjct: 230  PVTFTSTEPRFFQKSLMKFYEVSPWFAFPNNIANSSILQLIAEEFDRTRTLHIVDVGVSH 289

Query: 228  GLQWPTLLEALSHQSGGQPALVRLTIVADSSAQNNGIAAPFSKGPIGDNFASRLLRFAK- 404
            G+QWPTLLEAL+H+ GG P LV++T++A +   N     PF+ GP G+NF++RLL FAK 
Sbjct: 290  GMQWPTLLEALTHRPGGPPPLVKITVIAGAE-NNQNRGTPFAVGPPGENFSNRLLSFAKY 348

Query: 405  SXXXXXXXXXXXHPLQALNPQTLNTSPNETLIVCAQFRLHCLNHTTPDDRMAFLKVMRSL 584
                         PL+ LN Q ++ S +ETLIVC QFRLH LNH  PD+R  FLK +RS+
Sbjct: 349  MNINLQIKRLDDQPLKTLNAQLIDASNDETLIVCVQFRLHQLNHNAPDERTEFLKSLRSM 408

Query: 585  EPKAVVLCENDMSCSCNQCGDFTTGFSKRFEYLWRFLDSTSTAFKGRECEERRVMEGEAA 764
            EPK V+L EN+M CSCN CGDF TGFS++ EYLWRFLDSTS AFKGRE EERRVMEGEAA
Sbjct: 409  EPKGVILSENNMECSCNNCGDFATGFSRQVEYLWRFLDSTSAAFKGRESEERRVMEGEAA 468

Query: 765  TALINTLEMNEGKEKWCEKMRGVGFAGEVFGEDAIDGARALLRKYDSNWEMRIDERDGCV 944
             AL N  EMNEGKEKW E+MR VGF GEVFGEDAIDG RALLRKYDSNWEM++DE+DGCV
Sbjct: 469  KALTNRGEMNEGKEKWGERMRRVGFVGEVFGEDAIDGGRALLRKYDSNWEMKVDEKDGCV 528

Query: 945  CLWWKSQPVSF 977
             LWWK QPVSF
Sbjct: 529  GLWWKGQPVSF 539