BLASTX nr result
ID: Coptis23_contig00025699
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00025699 (891 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004152166.1| PREDICTED: 50S ribosomal protein L18-like is... 198 2e-48 gb|AFK35500.1| unknown [Lotus japonicus] 197 3e-48 ref|XP_002523696.1| conserved hypothetical protein [Ricinus comm... 196 5e-48 ref|XP_002331445.1| predicted protein [Populus trichocarpa] gi|2... 196 5e-48 ref|XP_004165546.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosoma... 196 6e-48 >ref|XP_004152166.1| PREDICTED: 50S ribosomal protein L18-like isoform 1 [Cucumis sativus] gi|449468916|ref|XP_004152167.1| PREDICTED: 50S ribosomal protein L18-like isoform 2 [Cucumis sativus] Length = 129 Score = 198 bits (503), Expect = 2e-48 Identities = 91/123 (73%), Positives = 113/123 (91%) Frame = -2 Query: 866 MTVMKRYVLRLFISLKYVTANVVDRNNGRIVATASTIEHSLKEALECGRSCNXXXXXAVG 687 MT++KRYVLRLF+SLKY+TANVVDRNNGR+VATAST+EHS+K +LECGRSCN VG Sbjct: 1 MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVG 60 Query: 686 EVLAMRLKVEGLDQGEGRGIHADVEKEIQKKGFKSQTKVWAIVNALKNNGVKVVLDDNGD 507 EVLAMRLKV+GL+QG+GRGIHAD++KEI+KKGFK+ TK+WAIVN+LKNNGVK++LD+N D Sbjct: 61 EVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIWAIVNSLKNNGVKLILDNNVD 120 Query: 506 NGS 498 + + Sbjct: 121 DNA 123 >gb|AFK35500.1| unknown [Lotus japonicus] Length = 128 Score = 197 bits (501), Expect = 3e-48 Identities = 93/123 (75%), Positives = 110/123 (89%) Frame = -2 Query: 866 MTVMKRYVLRLFISLKYVTANVVDRNNGRIVATASTIEHSLKEALECGRSCNXXXXXAVG 687 MT+MKRYVLRLF SLKY+TANVVDRNNGRIVAT+ST+EH++KE+LECGRSCN VG Sbjct: 1 MTLMKRYVLRLFTSLKYITANVVDRNNGRIVATSSTVEHAMKESLECGRSCNAKAAAIVG 60 Query: 686 EVLAMRLKVEGLDQGEGRGIHADVEKEIQKKGFKSQTKVWAIVNALKNNGVKVVLDDNGD 507 EVLA RLKVEGL++GEGRGIH +V+KE++KKGFK+QTK+WA+VNALKNNGVK+VLDD D Sbjct: 61 EVLARRLKVEGLNEGEGRGIHVNVKKEVEKKGFKNQTKIWAVVNALKNNGVKLVLDDEDD 120 Query: 506 NGS 498 S Sbjct: 121 TNS 123 >ref|XP_002523696.1| conserved hypothetical protein [Ricinus communis] gi|223537000|gb|EEF38636.1| conserved hypothetical protein [Ricinus communis] Length = 129 Score = 196 bits (499), Expect = 5e-48 Identities = 91/121 (75%), Positives = 108/121 (89%) Frame = -2 Query: 866 MTVMKRYVLRLFISLKYVTANVVDRNNGRIVATASTIEHSLKEALECGRSCNXXXXXAVG 687 MTV+KRYVLR+FISLKY+TANVVDRNNGRIVATAST+EHS+K LECGRSCN VG Sbjct: 1 MTVLKRYVLRMFISLKYITANVVDRNNGRIVATASTVEHSIKNTLECGRSCNAKAAAIVG 60 Query: 686 EVLAMRLKVEGLDQGEGRGIHADVEKEIQKKGFKSQTKVWAIVNALKNNGVKVVLDDNGD 507 EVLAMRLKVEGL+QG+GRGIH D KE++KKGFK++TK+WAI+NAL+NNGVKV+ +DN + Sbjct: 61 EVLAMRLKVEGLEQGQGRGIHVDANKEVEKKGFKNRTKIWAIINALRNNGVKVISNDNDE 120 Query: 506 N 504 N Sbjct: 121 N 121 >ref|XP_002331445.1| predicted protein [Populus trichocarpa] gi|222873523|gb|EEF10654.1| predicted protein [Populus trichocarpa] Length = 128 Score = 196 bits (499), Expect = 5e-48 Identities = 93/124 (75%), Positives = 110/124 (88%) Frame = -2 Query: 866 MTVMKRYVLRLFISLKYVTANVVDRNNGRIVATASTIEHSLKEALECGRSCNXXXXXAVG 687 MT++KRYVLRLFISLKY+TANVVDR NGRIVATAST+EHS+K LECGRSCN VG Sbjct: 1 MTLLKRYVLRLFISLKYITANVVDRKNGRIVATASTVEHSIKNTLECGRSCNAKSATVVG 60 Query: 686 EVLAMRLKVEGLDQGEGRGIHADVEKEIQKKGFKSQTKVWAIVNALKNNGVKVVLDDNGD 507 EVLAMRLKV GL+QG+GRGIH D+EKE++KKGFK++TK+WAIVNALKNNGVK++LD++ Sbjct: 61 EVLAMRLKVGGLEQGQGRGIHVDMEKEVEKKGFKNRTKIWAIVNALKNNGVKIILDEDNV 120 Query: 506 NGSR 495 N SR Sbjct: 121 NTSR 124 >ref|XP_004165546.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L18-like [Cucumis sativus] Length = 129 Score = 196 bits (498), Expect = 6e-48 Identities = 91/121 (75%), Positives = 111/121 (91%) Frame = -2 Query: 866 MTVMKRYVLRLFISLKYVTANVVDRNNGRIVATASTIEHSLKEALECGRSCNXXXXXAVG 687 MT++KRYVLRLF+SLKY+TANVVDRNNGR+VATAST+EHS+K +LECGRSCN VG Sbjct: 1 MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVG 60 Query: 686 EVLAMRLKVEGLDQGEGRGIHADVEKEIQKKGFKSQTKVWAIVNALKNNGVKVVLDDNGD 507 EVLAMRLKV+GL+QG+GRGIHAD +KEI+KKGFK+ TK+WAIVN+LKNNGVK++LD+N D Sbjct: 61 EVLAMRLKVDGLEQGQGRGIHADXKKEIEKKGFKNHTKIWAIVNSLKNNGVKLILDNNVD 120 Query: 506 N 504 + Sbjct: 121 D 121