BLASTX nr result

ID: Coptis23_contig00025687 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025687
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21348.3| unnamed protein product [Vitis vinifera]              118   4e-25
ref|XP_002298629.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23
ref|XP_002509512.1| conserved hypothetical protein [Ricinus comm...   108   5e-22
ref|XP_002967167.1| hypothetical protein SELMODRAFT_86596 [Selag...    89   4e-16
ref|XP_003548519.1| PREDICTED: uncharacterized protein LOC100813...    79   4e-13

>emb|CBI21348.3| unnamed protein product [Vitis vinifera]
          Length = 491

 Score =  118 bits (296), Expect = 4e-25
 Identities = 62/114 (54%), Positives = 76/114 (66%)
 Frame = +1

Query: 1   GIHAVESVSLLCEAAVFGLSLSVVHSNPFKEQTMGXXXXXXXXXXXXXXXVSEWYILVRW 180
           G+H  ESVSLLCEA +FGLS S+V SNP +E+T+G               V+EWY L++ 
Sbjct: 273 GVHIAESVSLLCEAGIFGLSFSMVGSNPNQERTVGFVMLALLFLTFSSQLVNEWYALMKC 332

Query: 181 LLRLPQSSTPSFKLGVKFIAKGLVLPFLPRKYWQTLLPGSSQPSTGFVPVLPTS 342
           LLRL Q    SFKLG+K  A+GLVLPFLPRK+W T++P SSQP TG  P  P S
Sbjct: 333 LLRLSQPQKNSFKLGLKCAAQGLVLPFLPRKHWWTIIPLSSQPKTG--PAEPLS 384


>ref|XP_002298629.1| predicted protein [Populus trichocarpa] gi|222845887|gb|EEE83434.1|
            predicted protein [Populus trichocarpa]
          Length = 1156

 Score =  114 bits (284), Expect = 1e-23
 Identities = 57/116 (49%), Positives = 71/116 (61%)
 Frame = +1

Query: 4    IHAVESVSLLCEAAVFGLSLSVVHSNPFKEQTMGXXXXXXXXXXXXXXXVSEWYILVRWL 183
            +H VES+SLLCEA +FG S++   SN  +E  +G               V+EWY LV+ L
Sbjct: 931  VHLVESISLLCEAGIFGFSIATERSNHMEESILGYTMLALLFLTFIVHIVNEWYALVKCL 990

Query: 184  LRLPQSSTPSFKLGVKFIAKGLVLPFLPRKYWQTLLPGSSQPSTGFVPVLPTSPET 351
            LRL Q    SFK G+K  AKGLVLPFLPRK+W  ++P  SQP TG   V P SPE+
Sbjct: 991  LRLSQPRRNSFKFGLKLAAKGLVLPFLPRKHWSKVIPIFSQPKTGLSAVPPLSPES 1046


>ref|XP_002509512.1| conserved hypothetical protein [Ricinus communis]
            gi|223549411|gb|EEF50899.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1095

 Score =  108 bits (270), Expect = 5e-22
 Identities = 53/117 (45%), Positives = 72/117 (61%)
 Frame = +1

Query: 1    GIHAVESVSLLCEAAVFGLSLSVVHSNPFKEQTMGXXXXXXXXXXXXXXXVSEWYILVRW 180
            G+  VES+SLLCE  +FGLS++  H NP + +  G               ++EWY L++ 
Sbjct: 864  GVQVVESISLLCEVGIFGLSIASNHLNPLEARNPGYIMLALLFLTFIAQIINEWYALIKC 923

Query: 181  LLRLPQSSTPSFKLGVKFIAKGLVLPFLPRKYWQTLLPGSSQPSTGFVPVLPTSPET 351
            +L L +    SF+LG+KF AKGLVLPFLPRK+W  ++P SSQ  TG   +LP  PET
Sbjct: 924  ILGLSRPKRNSFRLGLKFAAKGLVLPFLPRKHWSGVIPNSSQMKTGLSTILP--PET 978


>ref|XP_002967167.1| hypothetical protein SELMODRAFT_86596 [Selaginella moellendorffii]
           gi|300165158|gb|EFJ31766.1| hypothetical protein
           SELMODRAFT_86596 [Selaginella moellendorffii]
          Length = 760

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 45/118 (38%), Positives = 67/118 (56%), Gaps = 3/118 (2%)
 Frame = +1

Query: 1   GIHAVESVSLLCEAAVFGLSLSVV---HSNPFKEQTMGXXXXXXXXXXXXXXXVSEWYIL 171
           G+H VESVSLLCE AVF + ++++   HS+    +++G               ++EWY L
Sbjct: 515 GVHLVESVSLLCELAVFSIGMALLPDDHSSD-NRRSLGIAMVTLLLSSFMCQLINEWYAL 573

Query: 172 VRWLLRLPQSSTPSFKLGVKFIAKGLVLPFLPRKYWQTLLPGSSQPSTGFVPVLPTSP 345
           +  LL+L     PSFK G++ + KGLV PF+P++ W   +    QP  G VPV+  SP
Sbjct: 574 MEKLLKLSAPQEPSFKAGMRMLGKGLVFPFIPQRKWPKFITPPQQPRIGLVPVVHLSP 631


>ref|XP_003548519.1| PREDICTED: uncharacterized protein LOC100813171 [Glycine max]
          Length = 947

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 42/112 (37%), Positives = 60/112 (53%)
 Frame = +1

Query: 1    GIHAVESVSLLCEAAVFGLSLSVVHSNPFKEQTMGXXXXXXXXXXXXXXXVSEWYILVRW 180
            G+H VESVSLLCEA VF + +    S+  + +T                  ++WY +V  
Sbjct: 715  GVHVVESVSLLCEAGVFVILILHNGSHSVESKTWELVMLLLLMFTFIAQITNQWYAMVNS 774

Query: 181  LLRLPQSSTPSFKLGVKFIAKGLVLPFLPRKYWQTLLPGSSQPSTGFVPVLP 336
            LL L QS   S + G+K  AKGL+LPFLP K+W +++   SQ  T  + + P
Sbjct: 775  LLNLSQSQNKSLRDGLKLAAKGLILPFLPSKHWSSVISTFSQTETDILSLNP 826


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