BLASTX nr result

ID: Coptis23_contig00025682 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025682
         (1165 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACX85638.1| putative transposase [Cucumis melo]                    257   4e-66
ref|XP_003617143.1| Oligoribonuclease [Medicago truncatula] gi|3...   231   3e-58
ref|NP_001176010.1| Os10g0118700 [Oryza sativa Japonica Group] g...   214   3e-53
gb|ABA94758.1| hAT family dimerisation domain containing protein...   213   1e-52
gb|EEE50486.1| hypothetical protein OsJ_30552 [Oryza sativa Japo...   213   1e-52

>gb|ACX85638.1| putative transposase [Cucumis melo]
          Length = 680

 Score =  257 bits (656), Expect = 4e-66
 Identities = 127/261 (48%), Positives = 176/261 (67%), Gaps = 4/261 (1%)
 Frame = +1

Query: 376  DVNATQTLESGANAEKRKRGDRSEVWSHFKKVEGSIPL--KALCNYCKTPFKCDTSSNGT 549
            D  + Q+  S    +++     S VW HF KVEG  P   +A C +C   + CD+  NGT
Sbjct: 7    DETSNQSCSSPVLGKRKPVKPPSSVWEHFIKVEGCDPKYPRAACKHCGASYACDSKRNGT 66

Query: 550  SSMKSHIEKVCKKYPNRKPKDPKQSTLSFKVKEDGGHDLVATTFSQESCLEALAQMVIVD 729
            +++K H+EK CK Y N     P +  +  + + D   +L+  +F+QE+C + LA+MVI+D
Sbjct: 67   TNLKRHLEK-CKMYVN-----PLEDNV--EGEGDSESNLMTASFTQENCRKMLARMVILD 118

Query: 730  ELPFRFVENQGFVNFCRIAVPQFNVPRRTTITRHCIALYFEEKNKLKRAL--KGQKICVT 903
            ELPF+FVE++GF  FCR   P+F +P R T+ + C  +Y +EK KLK AL   GQ++C+T
Sbjct: 119  ELPFKFVESEGFHQFCRALNPKFVIPSRVTVAKDCFQMYMKEKKKLKNALTRSGQRVCLT 178

Query: 904  TDTWTSLQNINYMCLTAHYVDSEWKLKKKILCFCVVPNHKGETIGRMVEKCLLEWGIDSV 1083
            TDTWTS+QNINYM +TAH++D +W L K+IL FC V NHKG+TIGR +EKCL  WGID +
Sbjct: 179  TDTWTSVQNINYMVITAHFIDDDWNLHKRILNFCQVANHKGDTIGRAIEKCLEGWGIDRL 238

Query: 1084 FTVTCDNASSNNLAIDWLKKK 1146
            FTVT DNASSN++AI +L KK
Sbjct: 239  FTVTVDNASSNDVAIAYLVKK 259


>ref|XP_003617143.1| Oligoribonuclease [Medicago truncatula] gi|355518478|gb|AET00102.1|
            Oligoribonuclease [Medicago truncatula]
          Length = 1551

 Score =  231 bits (589), Expect = 3e-58
 Identities = 115/249 (46%), Positives = 160/249 (64%), Gaps = 7/249 (2%)
 Frame = +1

Query: 439  RSEVWSHFKKVEGSIPLKALCNYCKTP-FKCDTSSNGTSSMKSHIEKVCKKYPNRKPK-- 609
            +S VW HF K +G    +A+C +CK   +  D+ ++GTS++ +H+ K CKK+P       
Sbjct: 957  KSWVWDHFIKEKG----RAMCKWCKNASYAADSHNSGTSNLSTHLRKQCKKFPKHLDPNY 1012

Query: 610  DPKQSTLSFKVKE--DGGHDLVATTFSQESCLEALAQMVIVDELPFRFVENQGFVNFCRI 783
            DP Q+ LS +  +       +VA  F  +   +ALA+M+IVDELPF FVEN+GF  F  +
Sbjct: 1013 DPNQTILSLQDSKGTSSNSTIVAVHFDVDVSRQALARMIIVDELPFSFVENEGFRYFMSV 1072

Query: 784  AVPQFNVPRRTTITRHCIALYFEEKNKLKRALK--GQKICVTTDTWTSLQNINYMCLTAH 957
              P+  +P R  I R C+ LY  EK+KL+       Q +C+TTDTWTS+QNINYM LTAH
Sbjct: 1073 TQPRLPLPGRLAIARDCLNLYTSEKHKLRNMFTKANQSVCLTTDTWTSVQNINYMVLTAH 1132

Query: 958  YVDSEWKLKKKILCFCVVPNHKGETIGRMVEKCLLEWGIDSVFTVTCDNASSNNLAIDWL 1137
            ++D +WK+ K+IL FC + +HKGE IG+  EKCL  W ID VFT+T DNASSN+LAI +L
Sbjct: 1133 FIDQDWKMHKRILNFCPITSHKGEVIGKKFEKCLEGWMIDKVFTITVDNASSNDLAISYL 1192

Query: 1138 KKKTSHWKN 1164
            K +   W +
Sbjct: 1193 KNRMEDWNS 1201


>ref|NP_001176010.1| Os10g0118700 [Oryza sativa Japonica Group]
            gi|16924038|gb|AAL31650.1|AC079179_5 Putative Tam3-like
            transposon protein [Oryza sativa]
            gi|31429904|gb|AAP51893.1| hAT family dimerisation domain
            containing protein [Oryza sativa Japonica Group]
            gi|255679178|dbj|BAH94738.1| Os10g0118700 [Oryza sativa
            Japonica Group]
          Length = 737

 Score =  214 bits (546), Expect = 3e-53
 Identities = 115/257 (44%), Positives = 159/257 (61%), Gaps = 9/257 (3%)
 Frame = +1

Query: 400  ESGANAEKRKRGD---RSEVWSHFKKVE-GSIPLKALCNYCKTPFKCDTSSNGTSSMKSH 567
            E  A+ E RKR     RS+VW  F KV+  +   +A C +C   F C + +NGTSS+K+H
Sbjct: 45   EEKADEESRKRKPMALRSDVWESFSKVKLANGDERAKCKWCTKLFHCGSRTNGTSSLKAH 104

Query: 568  IEKVCKKYPNRKPKDPKQSTLSFKVKEDGGHDLVATT---FSQESCLEALAQMVIVDELP 738
            + K+CKK PN KP    Q TL      DG   L   T   F  +      A+M+I DE P
Sbjct: 105  L-KICKKNPN-KPVVDNQGTLQL-TPCDGNSTLGTVTTWKFDPDKLRRCFAEMIIEDEQP 161

Query: 739  FRFVENQGFVNFCRIAVPQFNVPRRTTITRHCIALYFEEKNKLKRALKGQ--KICVTTDT 912
            F   E  G   F  +A P+F +P R TITR C+ +Y +EK KLK+  K    ++C+TTDT
Sbjct: 162  FVLSERSGLRKFMTLACPRFVLPSRRTITRACVKVYEDEKEKLKKFFKDNCVRVCLTTDT 221

Query: 913  WTSLQNINYMCLTAHYVDSEWKLKKKILCFCVVPNHKGETIGRMVEKCLLEWGIDSVFTV 1092
            WT+  + N+MC+TAH++D+EW L+KKI+ F +V  H+GE IG+ +E CL EWGID VFT+
Sbjct: 222  WTAKNSQNFMCVTAHFIDNEWNLQKKIIGFFLVKGHRGEDIGKSLENCLAEWGIDKVFTI 281

Query: 1093 TCDNASSNNLAIDWLKK 1143
            T DNAS+NN AI ++++
Sbjct: 282  TVDNASANNNAIKYMRR 298


>gb|ABA94758.1| hAT family dimerisation domain containing protein [Oryza sativa
            Japonica Group]
          Length = 932

 Score =  213 bits (541), Expect = 1e-52
 Identities = 114/254 (44%), Positives = 157/254 (61%), Gaps = 9/254 (3%)
 Frame = +1

Query: 409  ANAEKRKRGD---RSEVWSHFKKVE-GSIPLKALCNYCKTPFKCDTSSNGTSSMKSHIEK 576
            A+ E RKR     RS+VW  F KV+  +   +A C +C   F C + +NGTSS+K+H+ K
Sbjct: 290  ADEESRKRKPMALRSDVWESFSKVKLANGDERAKCKWCTKLFHCGSRTNGTSSLKAHL-K 348

Query: 577  VCKKYPNRKPKDPKQSTLSFKVKEDGGHDLVATT---FSQESCLEALAQMVIVDELPFRF 747
            +CKK PN KP    Q TL      DG   L   T   F  +      A+M+I DE PF  
Sbjct: 349  ICKKNPN-KPVVDNQGTLQL-TPCDGNSTLGTVTTWKFDPDKLRRCFAEMIIEDEQPFVL 406

Query: 748  VENQGFVNFCRIAVPQFNVPRRTTITRHCIALYFEEKNKLKRALKGQ--KICVTTDTWTS 921
             E  G   F  +A P+F +P R TITR C+ +Y +EK KLK+  K    ++C+TTDTWT+
Sbjct: 407  SERSGLRKFMTLACPRFVLPSRRTITRACVKVYEDEKEKLKKFFKDNCVRVCLTTDTWTA 466

Query: 922  LQNINYMCLTAHYVDSEWKLKKKILCFCVVPNHKGETIGRMVEKCLLEWGIDSVFTVTCD 1101
              + N+MC+TAH++D+EW L+KKI+ F  V  H+GE IG+ +E CL EWGID VFT+T D
Sbjct: 467  KNSQNFMCVTAHFIDNEWNLQKKIIGFFFVKGHRGEDIGKSLENCLAEWGIDKVFTITVD 526

Query: 1102 NASSNNLAIDWLKK 1143
            NAS+NN AI ++++
Sbjct: 527  NASANNNAIKYMRR 540


>gb|EEE50486.1| hypothetical protein OsJ_30552 [Oryza sativa Japonica Group]
          Length = 690

 Score =  213 bits (541), Expect = 1e-52
 Identities = 114/254 (44%), Positives = 157/254 (61%), Gaps = 9/254 (3%)
 Frame = +1

Query: 409  ANAEKRKRGD---RSEVWSHFKKVE-GSIPLKALCNYCKTPFKCDTSSNGTSSMKSHIEK 576
            A+ E RKR     RS+VW  F KV+  +   +A C +C   F C + +NGTSS+K+H+ K
Sbjct: 48   ADEESRKRKPMALRSDVWESFSKVKLANGDERAKCKWCTKLFHCGSRTNGTSSLKAHL-K 106

Query: 577  VCKKYPNRKPKDPKQSTLSFKVKEDGGHDLVATT---FSQESCLEALAQMVIVDELPFRF 747
            +CKK PN KP    Q TL      DG   L   T   F  +      A+M+I DE PF  
Sbjct: 107  ICKKNPN-KPVVDNQGTLQL-TPCDGNSTLGTVTTWKFDPDKLRRCFAEMIIEDEQPFVL 164

Query: 748  VENQGFVNFCRIAVPQFNVPRRTTITRHCIALYFEEKNKLKRALKGQ--KICVTTDTWTS 921
             E  G   F  +A P+F +P R TITR C+ +Y +EK KLK+  K    ++C+TTDTWT+
Sbjct: 165  SERSGLRKFMTLACPRFVLPSRRTITRACVKVYEDEKEKLKKFFKDNCVRVCLTTDTWTA 224

Query: 922  LQNINYMCLTAHYVDSEWKLKKKILCFCVVPNHKGETIGRMVEKCLLEWGIDSVFTVTCD 1101
              + N+MC+TAH++D+EW L+KKI+ F  V  H+GE IG+ +E CL EWGID VFT+T D
Sbjct: 225  KNSQNFMCVTAHFIDNEWNLQKKIIGFFFVKGHRGEDIGKSLENCLAEWGIDKVFTITVD 284

Query: 1102 NASSNNLAIDWLKK 1143
            NAS+NN AI ++++
Sbjct: 285  NASANNNAIKYMRR 298


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