BLASTX nr result

ID: Coptis23_contig00025673 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025673
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312043.1| predicted protein [Populus trichocarpa] gi|2...   104   8e-21
ref|XP_002532264.1| Peptide transporter, putative [Ricinus commu...   100   2e-19
ref|XP_002532262.1| Peptide transporter, putative [Ricinus commu...    98   6e-19
ref|NP_190152.1| major facilitator protein [Arabidopsis thaliana...    95   7e-18
emb|CBI16245.3| unnamed protein product [Vitis vinifera]               94   1e-17

>ref|XP_002312043.1| predicted protein [Populus trichocarpa] gi|222851863|gb|EEE89410.1|
           predicted protein [Populus trichocarpa]
          Length = 559

 Score =  104 bits (259), Expect = 8e-21
 Identities = 46/68 (67%), Positives = 57/68 (83%)
 Frame = +1

Query: 1   WYFFTLYLASAIGIIAIVYVENNVGWGLGFGLCLAINAAGLAVFLLGKRYYRHIKPRGSP 180
           WYFFTLYLASAI + AI+YV+++V WGLGFG+ +  NA GLAVFLLGKR+Y H KP+GSP
Sbjct: 180 WYFFTLYLASAISLTAIIYVQDSVSWGLGFGIGVVANAIGLAVFLLGKRFYCHTKPKGSP 239

Query: 181 FTNLARVV 204
           F  +ARV+
Sbjct: 240 FVGIARVL 247


>ref|XP_002532264.1| Peptide transporter, putative [Ricinus communis]
           gi|223528052|gb|EEF30130.1| Peptide transporter,
           putative [Ricinus communis]
          Length = 566

 Score =  100 bits (248), Expect = 2e-19
 Identities = 46/68 (67%), Positives = 51/68 (75%)
 Frame = +1

Query: 1   WYFFTLYLASAIGIIAIVYVENNVGWGLGFGLCLAINAAGLAVFLLGKRYYRHIKPRGSP 180
           W+FFTLY AS I + AIVYVE N+ W LGFGLCL  N   L +FLLGKR+YR  KP GSP
Sbjct: 179 WFFFTLYSASVISVTAIVYVEENISWALGFGLCLGANFIALVIFLLGKRFYRCDKPEGSP 238

Query: 181 FTNLARVV 204
           FT LARVV
Sbjct: 239 FTALARVV 246


>ref|XP_002532262.1| Peptide transporter, putative [Ricinus communis]
           gi|223528050|gb|EEF30128.1| Peptide transporter,
           putative [Ricinus communis]
          Length = 561

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 44/67 (65%), Positives = 50/67 (74%)
 Frame = +1

Query: 1   WYFFTLYLASAIGIIAIVYVENNVGWGLGFGLCLAINAAGLAVFLLGKRYYRHIKPRGSP 180
           W+FFTLY +S IG  AIV +E +V W LGFG+CLA N  GL +FLLG  YYRH KP GSP
Sbjct: 179 WFFFTLYSSSVIGATAIVIIEEDVSWALGFGICLAANFIGLVIFLLGNPYYRHDKPEGSP 238

Query: 181 FTNLARV 201
           FT LARV
Sbjct: 239 FTGLARV 245


>ref|NP_190152.1| major facilitator protein [Arabidopsis thaliana]
           gi|75181814|sp|Q9M1E1.1|PTR38_ARATH RecName:
           Full=Probable nitrate excretion transporter 2; AltName:
           Full=Protein NAXT1-like 1 gi|6996269|emb|CAB75495.1|
           putative protein [Arabidopsis thaliana]
           gi|332644535|gb|AEE78056.1| major facilitator protein
           [Arabidopsis thaliana]
          Length = 557

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 40/68 (58%), Positives = 51/68 (75%)
 Frame = +1

Query: 1   WYFFTLYLASAIGIIAIVYVENNVGWGLGFGLCLAINAAGLAVFLLGKRYYRHIKPRGSP 180
           W+FFT YLA++I   AIVY E N+ W  GFGLC+A N  GL VF+ GK++Y+H KP GSP
Sbjct: 180 WFFFTWYLAASISATAIVYAEENISWSFGFGLCVAANLLGLIVFISGKKFYKHDKPLGSP 239

Query: 181 FTNLARVV 204
           FT+L RV+
Sbjct: 240 FTSLLRVI 247


>emb|CBI16245.3| unnamed protein product [Vitis vinifera]
          Length = 545

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 41/67 (61%), Positives = 50/67 (74%)
 Frame = +1

Query: 1   WYFFTLYLASAIGIIAIVYVENNVGWGLGFGLCLAINAAGLAVFLLGKRYYRHIKPRGSP 180
           WYFF  Y++S I   AIVYVE+NV W  GFGL +  N  GL +FLLG R+YRH+KP+GSP
Sbjct: 189 WYFFVFYVSSVISNTAIVYVEDNVSWTWGFGLTVVCNLIGLVIFLLGSRFYRHVKPQGSP 248

Query: 181 FTNLARV 201
           F +LARV
Sbjct: 249 FVDLARV 255


Top