BLASTX nr result

ID: Coptis23_contig00025664 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025664
         (701 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513096.1| conserved hypothetical protein [Ricinus comm...   117   2e-24
ref|XP_003588305.1| hypothetical protein MTR_1g005670 [Medicago ...    73   5e-11
ref|XP_002531736.1| conserved hypothetical protein [Ricinus comm...    58   2e-06

>ref|XP_002513096.1| conserved hypothetical protein [Ricinus communis]
           gi|223548107|gb|EEF49599.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 813

 Score =  117 bits (293), Expect = 2e-24
 Identities = 55/59 (93%), Positives = 56/59 (94%)
 Frame = +1

Query: 511 GRRGPGCASDRHIHRGVVARVSRPGILHLAFMISTFNCAPETRSKHARPVCFFHDMLWS 687
           GRRGPGCASDRH+  GVVARVSRPGILHLAFMISTF CAPETRSKHARPVCFFHDMLWS
Sbjct: 742 GRRGPGCASDRHM--GVVARVSRPGILHLAFMISTFRCAPETRSKHARPVCFFHDMLWS 798


>ref|XP_003588305.1| hypothetical protein MTR_1g005670 [Medicago truncatula]
           gi|355477353|gb|AES58556.1| hypothetical protein
           MTR_1g005670 [Medicago truncatula]
          Length = 250

 Score = 73.2 bits (178), Expect = 5e-11
 Identities = 32/32 (100%), Positives = 32/32 (100%)
 Frame = +1

Query: 604 MISTFNCAPETRSKHARPVCFFHDMLWSRVSS 699
           MISTFNCAPETRSKHARPVCFFHDMLWSRVSS
Sbjct: 1   MISTFNCAPETRSKHARPVCFFHDMLWSRVSS 32


>ref|XP_002531736.1| conserved hypothetical protein [Ricinus communis]
           gi|223528639|gb|EEF30656.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 74

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/41 (68%), Positives = 31/41 (75%)
 Frame = -1

Query: 266 DRGLVVPASAAMQWKGRSLNRPPSFFLFKDTKAVP*DWTLR 144
           DRGL+VPASAAMQWKGRSLNRPPSFF  K +     D  +R
Sbjct: 26  DRGLIVPASAAMQWKGRSLNRPPSFFSKKKSSTKRLDSRMR 66


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