BLASTX nr result

ID: Coptis23_contig00025659 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025659
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61230.1| hypothetical protein VITISV_010115 [Vitis vinifera]   102   3e-20
emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera]   100   1e-19
dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]                    100   1e-19
emb|CAN83285.1| hypothetical protein VITISV_004139 [Vitis vinifera]   100   2e-19
emb|CAN60809.1| hypothetical protein VITISV_044451 [Vitis vinifera]    99   3e-19

>emb|CAN61230.1| hypothetical protein VITISV_010115 [Vitis vinifera]
          Length = 478

 Score =  102 bits (255), Expect = 3e-20
 Identities = 57/119 (47%), Positives = 73/119 (61%)
 Frame = +2

Query: 8   SFIFILRAKFEMKDLGTLS*FLGIEITSTTTGLHLSQTKYIVNLL*RYSMMECKPCGTHP 187
           +FI  L  +F +KDLG L+ FLG+E+TS T GL LSQ KYI +LL R  M E KP  T  
Sbjct: 167 TFIQQLSQRFSLKDLGPLTYFLGVEVTSHTNGLFLSQRKYIADLLNRTHMTEAKPAPTPL 226

Query: 188 CVCQVSTLNSLPRVETPLPDAIEYH*LIGYFQYLAFTRPDIAYAIHHVAQFMSAPRTLH 364
               + TL S     TPL D  EY  ++G  QYL+ TRPDIAY ++ ++QFM  P + H
Sbjct: 227 ATSPILTLQS----GTPLSDPTEYRTVVGSLQYLSLTRPDIAYTVNKLSQFMHQPTSDH 281


>emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera]
          Length = 1112

 Score =  100 bits (250), Expect = 1e-19
 Identities = 56/119 (47%), Positives = 73/119 (61%)
 Frame = +2

Query: 8    SFIFILRAKFEMKDLGTLS*FLGIEITSTTTGLHLSQTKYIVNLL*RYSMMECKPCGTHP 187
            +FI  L  +F +KDLG L+ FLG+E+TS T GL LSQ KYI +LL R  M E KP  T  
Sbjct: 827  TFIQQLSQRFSLKDLGPLTYFLGVEVTSHTNGLFLSQHKYIADLLNRTHMTEAKPAPTPL 886

Query: 188  CVCQVSTLNSLPRVETPLPDAIEYH*LIGYFQYLAFTRPDIAYAIHHVAQFMSAPRTLH 364
                + TL S     TPL +  EY  ++G  QYL+ TRPDIAY ++ ++QFM  P + H
Sbjct: 887  ATSPILTLQS----GTPLSNPTEYRTMVGSLQYLSLTRPDIAYTVNKLSQFMHQPTSDH 941


>dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]
          Length = 1429

 Score =  100 bits (249), Expect = 1e-19
 Identities = 56/121 (46%), Positives = 76/121 (62%)
 Frame = +2

Query: 2    LSSFIFILRAKFEMKDLGTLS*FLGIEITSTTTGLHLSQTKYIVNLL*RYSMMECKPCGT 181
            + +F   L ++F +KDLG LS FLGIE T T+ GLHL Q KYI +LL +++M++ KP  T
Sbjct: 1127 VQAFNASLASRFSLKDLGPLSYFLGIEATRTSRGLHLMQRKYITDLLKKHNMLDTKPVST 1186

Query: 182  HPCVCQVSTLNSLPRVETPLPDAIEYH*LIGYFQYLAFTRPDIAYAIHHVAQFMSAPRTL 361
                    +L S     T L DA EY  ++G  QYLAFTRPDIA+A++ ++QFM  P   
Sbjct: 1187 PMSPTPKLSLLS----GTALDDATEYRTVLGSLQYLAFTRPDIAFAVNRLSQFMHRPTNE 1242

Query: 362  H 364
            H
Sbjct: 1243 H 1243


>emb|CAN83285.1| hypothetical protein VITISV_004139 [Vitis vinifera]
          Length = 1556

 Score =  100 bits (248), Expect = 2e-19
 Identities = 53/122 (43%), Positives = 78/122 (63%)
 Frame = +2

Query: 2    LSSFIFILRAKFEMKDLGTLS*FLGIEITSTTTGLHLSQTKYIVNLL*RYSMMECKPCGT 181
            +S+FI +L ++F MKDLG +  FLGIEI+ T  GLHLSQ+ Y   +L R +M++CKP  T
Sbjct: 1212 VSTFIQLLSSEFAMKDLGQIHYFLGIEISQTADGLHLSQSHYAFTILERANMVDCKPMST 1271

Query: 182  HPCVCQVSTLNSLPRVETPLPDAIEYH*LIGYFQYLAFTRPDIAYAIHHVAQFMSAPRTL 361
             P   +  TL +   +E P      +  L+G  QYL  TRPD++Y++++ +QFM AP  +
Sbjct: 1272 -PLEAKTKTLPNSVLLEDP----SYFRGLVGALQYLTLTRPDLSYSVNYASQFMHAPTLV 1326

Query: 362  HL 367
            HL
Sbjct: 1327 HL 1328


>emb|CAN60809.1| hypothetical protein VITISV_044451 [Vitis vinifera]
          Length = 377

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 52/122 (42%), Positives = 79/122 (64%)
 Frame = +2

Query: 2   LSSFIFILRAKFEMKDLGTLS*FLGIEITSTTTGLHLSQTKYIVNLL*RYSMMECKPCGT 181
           +S+FI +L ++F MKDLG +  FLGIEI+ T+ GLHLSQ+ Y + +L R +M++CKP  T
Sbjct: 192 VSTFIQLLSSEFTMKDLGQIHYFLGIEISQTSDGLHLSQSHYALTILERANMVDCKPMST 251

Query: 182 HPCVCQVSTLNSLPRVETPLPDAIEYH*LIGYFQYLAFTRPDIAYAIHHVAQFMSAPRTL 361
            P   +  T ++    +  L D   +  L+G  QYL  TRPD++Y+++  +QFM AP  +
Sbjct: 252 -PLEAKTRTSSN----DVLLEDLSYFRGLVGALQYLTLTRPDLSYSVNFASQFMHAPTVV 306

Query: 362 HL 367
           HL
Sbjct: 307 HL 308


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