BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025652
         (960 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vi...   153   7e-35
ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|2...   146   6e-33
gb|ABK92768.1| unknown [Populus trichocarpa]                          146   6e-33
ref|XP_002525484.1| conserved hypothetical protein [Ricinus comm...   132   2e-28
ref|XP_004146726.1| PREDICTED: F-box protein At5g07610-like [Cuc...   123   7e-26

>ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vinifera]
           gi|296088512|emb|CBI37503.3| unnamed protein product
           [Vitis vinifera]
          Length = 378

 Score =  153 bits (386), Expect = 7e-35
 Identities = 105/318 (33%), Positives = 167/318 (52%), Gaps = 10/318 (3%)
 Frame = -1

Query: 927 VKYVNMNSDQAVVQDKILDFLPEKVEVIASSNELLCCHRSQKLGVRVDNLIYVCNPANQE 748
           + Y+    +   VQ  I  FLPE V ++ S N L+CC   + +    D  I+VCNP+N++
Sbjct: 68  ISYIPATMEGTQVQQTIFSFLPEDVVILGSCNGLVCC---RSVFPSPDPSIFVCNPSNKQ 124

Query: 747 YVQIEWPNGSGKHQYFALAFNPFHYRMDDLSSFKLVCISK-----EDMLSCLFQVYSSKS 583
           ++++       K   + LAFNPF   +D  ++FK+V +S+     +D     F++YSS++
Sbjct: 125 WIRL-LETTPDKESSYGLAFNPFQSPIDMPTNFKVVRVSQAQTDMDDDSYFSFEIYSSQA 183

Query: 582 KEWRKLDVYKSGYDNRISWPDGQVVFASGVLHWLTNGN-ILAFDVETEQPYFISLPVERI 406
             W+K         N       + +F  G+LHWLT+G+ +L+F++E E  + IS P   I
Sbjct: 184 GAWKKSKEICQCNHNLFK---NKGIFVGGILHWLTDGDQVLSFNIENELSWLISAPFPTI 240

Query: 405 HKNYGLCEVCIGESEGHLHLIVIPKAGLRVWILGD--GQKWVVKHWVSLSRIEEEYQHFL 232
           H    + E+CIGES G LH I+I + GL+VW L D     W + H  +L  +EEE    L
Sbjct: 241 HLT-AIPEMCIGESRGRLHYIMISEDGLQVWALEDYYDSNWSLVHSTTLEVMEEENSQLL 299

Query: 231 Y-TDAKITASLAPTNIVIPTRIEPVVYKDEILLIKLRHHFSFENEKLETGTMMYLYNFDT 55
           Y T  ++   ++  +I     ++P+ +KD +LL+++              T + LY   T
Sbjct: 300 YNTRDRVAQRISIDSI---PWMDPLAFKDGLLLMRV-------------STKIILYCIGT 343

Query: 54  RKMEELF-LSMFKSSSIF 4
           RKMEEL  LS    +SIF
Sbjct: 344 RKMEELCNLSKLGRNSIF 361


>ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|222870635|gb|EEF07766.1|
           predicted protein [Populus trichocarpa]
          Length = 424

 Score =  146 bits (369), Expect = 6e-33
 Identities = 97/292 (33%), Positives = 156/292 (53%), Gaps = 7/292 (2%)
 Frame = -1

Query: 891 VQDKILDFLPEKVEVIASSNELLCCHRSQKLGVRVDNLIYVCNPANQEYVQIEWPNGSGK 712
           +Q  +  FLP+ V V+A  N L+CC          D  IYVCNP N E+ +++W    GK
Sbjct: 83  LQQDVFAFLPQDVVVLALCNGLVCCRSCYPFE---DPAIYVCNPLNSEWWKLDWKE-PGK 138

Query: 711 HQYFALAFNPFHYRMDDLSSFKLV----CISKEDMLSCLFQVYSSKSKEWRKLDVYKSGY 544
             + ALAFNPF     +L++FK+V      ++++     F++Y+S+++ W KL       
Sbjct: 139 ESFIALAFNPFQDISVNLTNFKVVRPRQFETEQEEAYFSFEIYASRTRNW-KLSKEVCWC 197

Query: 543 DNRISWPDGQVVFASGVLHWLTNGN-ILAFDVETEQPYFISLPVERIHKNYGLCEVCIGE 367
           DN +S  +G  +F+ G+LHWLT+G+ IL F+VE E    IS P+     N      CIGE
Sbjct: 198 DNSLSKNEG--IFSGGILHWLTDGDQILTFNVENELALLISTPLPAGEFNTRP-HACIGE 254

Query: 366 SEGHLHLIVIPKAGLRVWILGD--GQKWVVKHWVSLSRIEEEYQHFLYTDAKITASLAPT 193
           SEG L+ ++I + GL VW+L D     W +K+  +L++IE+E+   +         +   
Sbjct: 255 SEGQLYYVLISEEGLHVWVLEDYFDSTWSLKYSKTLAQIEKEHSDIMIN--LYNRVMLWQ 312

Query: 192 NIVIPTRIEPVVYKDEILLIKLRHHFSFENEKLETGTMMYLYNFDTRKMEEL 37
            I     ++P+ +KD +L++++                +YLY+ DT KMEE+
Sbjct: 313 RIDDRPWMDPLAFKDGVLVVRI-------------SNTIYLYHVDTSKMEEV 351


>gb|ABK92768.1| unknown [Populus trichocarpa]
          Length = 384

 Score =  146 bits (369), Expect = 6e-33
 Identities = 97/292 (33%), Positives = 156/292 (53%), Gaps = 7/292 (2%)
 Frame = -1

Query: 891 VQDKILDFLPEKVEVIASSNELLCCHRSQKLGVRVDNLIYVCNPANQEYVQIEWPNGSGK 712
           +Q  +  FLP+ V V+A  N L+CC          D  IYVCNP N E+ +++W    GK
Sbjct: 83  LQQDVFAFLPQDVVVLALCNGLVCCRSCYPFE---DPAIYVCNPLNSEWWKLDWKE-PGK 138

Query: 711 HQYFALAFNPFHYRMDDLSSFKLV----CISKEDMLSCLFQVYSSKSKEWRKLDVYKSGY 544
             + ALAFNPF     +L++FK+V      ++++     F++Y+S+++ W KL       
Sbjct: 139 ESFIALAFNPFQDISVNLTNFKVVRPRQFETEQEEAYFSFEIYASRTRNW-KLSKEVCWC 197

Query: 543 DNRISWPDGQVVFASGVLHWLTNGN-ILAFDVETEQPYFISLPVERIHKNYGLCEVCIGE 367
           DN +S  +G  +F+ G+LHWLT+G+ IL F+VE E    IS P+     N      CIGE
Sbjct: 198 DNSLSKNEG--IFSGGILHWLTDGDQILTFNVENELALLISTPLPAGEFNTRP-HACIGE 254

Query: 366 SEGHLHLIVIPKAGLRVWILGD--GQKWVVKHWVSLSRIEEEYQHFLYTDAKITASLAPT 193
           SEG L+ ++I + GL VW+L D     W +K+  +L++IE+E+   +         +   
Sbjct: 255 SEGQLYYVLISEEGLHVWVLEDYFDSTWSLKYSKTLAQIEKEHSDIMIN--LYNRVMLWQ 312

Query: 192 NIVIPTRIEPVVYKDEILLIKLRHHFSFENEKLETGTMMYLYNFDTRKMEEL 37
            I     ++P+ +KD +L++++                +YLY+ DT KMEE+
Sbjct: 313 RIDDRPWMDPLAFKDGVLVVRI-------------SNTIYLYHVDTSKMEEV 351


>ref|XP_002525484.1| conserved hypothetical protein [Ricinus communis]
           gi|223535221|gb|EEF36899.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 375

 Score =  132 bits (331), Expect = 2e-28
 Identities = 94/317 (29%), Positives = 162/317 (51%), Gaps = 9/317 (2%)
 Frame = -1

Query: 927 VKYVNMNSDQAVVQDKILDFLPEKVEVIASSNELLCCHRSQKLGVRVDNLIYVCNPANQE 748
           + Y+ +  +   +  K+ DFLP+ V ++ + N L+CC       +     I+VCNP N+E
Sbjct: 74  INYIPVKWEGLELHKKVFDFLPQDVVLLTTCNGLVCCRSCFPFELPA---IFVCNPLNKE 130

Query: 747 YVQIEWPNGSGKHQYFALAFNPFHYRMDDLSSFKLVCISKEDMLSCLFQVYSSKSKEWRK 568
           +V+++W     +H   ALAF+P      + ++FKL     ++ L   F +YSS++  W  
Sbjct: 131 WVKLDWTEPDKEHS-IALAFDPLLDISGNSANFKL-----DEQLYFSFDIYSSRTGSWN- 183

Query: 567 LDVYKSGYDNRISWPDGQV-----VFASGVLHWLTNGN-ILAFDVETEQPYFISLPVERI 406
                      I W +  +     V+  GVLHWLT+ + IL FDV+ E  + IS PV   
Sbjct: 184 -------LSKDICWCNSNLHKNKGVYIRGVLHWLTDEDQILTFDVDNELAFLISAPVPAA 236

Query: 405 HKNYGLCEVCIGESEGHLHLIVIPKAGLRVWILGD--GQKWVVKHWVSLSRIEEEYQHFL 232
             +    + CIGE EG LH ++I + G  +W L D     W++K+  +L+ +E+E+  FL
Sbjct: 237 EFSTAP-KACIGELEGCLHYVMISEEGFHIWSLEDYFELNWLLKYSKTLAEMEQEHPKFL 295

Query: 231 YTDAKITASLAPTNIVIPTRIEPVVYKDEILLIKLRHHFSFENEKLETGTMMYLYNFDTR 52
               ++   L  T+ V P  ++ + +KD IL++++              T++YLY+    
Sbjct: 296 LNMQEL-VKLQMTDDVSPW-VDSLAFKDGILVLRV-------------STIVYLYDIIRS 340

Query: 51  KMEELF-LSMFKSSSIF 4
           KM+E+   S F +SS++
Sbjct: 341 KMQEVCDNSKFGTSSMY 357


>ref|XP_004146726.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
          Length = 398

 Score =  123 bits (308), Expect = 7e-26
 Identities = 92/301 (30%), Positives = 153/301 (50%), Gaps = 15/301 (4%)
 Frame = -1

Query: 921 YVNMNSDQAVVQDKILDFLPEKVEVIASSNELLCCH---RSQKLGVRVDNLIYVCNPANQ 751
           Y+ +++D  V Q  +  FLPE V ++ S N L+CC    R+Q         IYVCNP  +
Sbjct: 72  YMPIDADSKV-QKMVFGFLPEDVVILQSCNGLVCCRSCFRTQHSTTH-STTIYVCNPLFK 129

Query: 750 EYVQIEWPNGSGKHQYFALAFNPFHYRMDDLSSFKLVCI----SKEDMLSCLFQVYSSKS 583
           ++V  E           ALAF+P    ++  ++FK+V I    ++++ +   F++YSS++
Sbjct: 130 KWVSFEVAQ-LDSFSSIALAFDPILDPVNTATNFKVVRIQQLENEQEEMYYTFEIYSSET 188

Query: 582 KEWRKLDVYKSGYDNRISWPDGQVV-----FASGVLHWLTNGN-ILAFDVETEQPYFISL 421
             W++         + + + DG ++     +A GVLHWLT+ + ILAFD E E    +  
Sbjct: 189 GTWKE--------SSEVCYSDGNLLNNNGTYAKGVLHWLTDTDQILAFDTEKELSLLVPS 240

Query: 420 PVERIHKNYGLCEVCIGESEGHLHLIVIPKAGLRVWILGD--GQKWVVKHWVSLSRIEEE 247
           P+  +         CIGES+G LH I+I + G+ VW L D    KW +KH   L  IE+E
Sbjct: 241 PIPALEMFIDAPGTCIGESKGLLHFIMICEDGIIVWCLDDYFEAKWTLKHSKQLQMIEDE 300

Query: 246 YQHFLYTDAKITASLAPTNIVIPTRIEPVVYKDEILLIKLRHHFSFENEKLETGTMMYLY 67
             +  +   KI          +   ++P  +KDE+LL+++     F +  +ETG ++ + 
Sbjct: 301 NPNMFFKLYKIMQRRRLPG--MEPYMDPWAFKDEVLLMRVFSTVYFYH--IETGKVVEVC 356

Query: 66  N 64
           N
Sbjct: 357 N 357