BLASTX nr result

ID: Coptis23_contig00025651 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025651
         (1066 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271020.2| PREDICTED: uncharacterized protein LOC100260...   336   7e-90
emb|CAN80760.1| hypothetical protein VITISV_014603 [Vitis vinifera]   325   1e-86
ref|XP_002303025.1| predicted protein [Populus trichocarpa] gi|2...   303   4e-80
ref|XP_003624244.1| Hydroxyproline-rich glycoprotein-like protei...   293   6e-77
ref|XP_002527287.1| chitinase, putative [Ricinus communis] gi|22...   291   2e-76

>ref|XP_002271020.2| PREDICTED: uncharacterized protein LOC100260014 [Vitis vinifera]
           gi|302144208|emb|CBI23335.3| unnamed protein product
           [Vitis vinifera]
          Length = 355

 Score =  336 bits (861), Expect = 7e-90
 Identities = 172/261 (65%), Positives = 205/261 (78%), Gaps = 8/261 (3%)
 Frame = +1

Query: 91  APFPCFATETTFANEQISDRIDLEAILVSIDDFFNRNPFFVSGVTFIWLVVIPLTQEYLR 270
           AP PCFA+ET  +    +D+I+LE+I+VSIDDFFNRNPFFV+GVTFIWLVV+PLTQEYL+
Sbjct: 86  APLPCFASETVVS---ANDKINLESIVVSIDDFFNRNPFFVAGVTFIWLVVVPLTQEYLK 142

Query: 271 KYKFVSAIDAFQKLKSDPNSQLLDIRDKASLNYLGTPNLKILNKKAVQVEFLEGQEDGFV 450
           K+KF+SAI+AF+KL+ DPN+QLLDIRD  SL YLG+PNLKILNK  VQV+F +  ED F+
Sbjct: 143 KFKFISAINAFRKLRDDPNAQLLDIRDGKSLAYLGSPNLKILNKGVVQVQFSQDDEDAFL 202

Query: 451 KKVLQNFKDPGNTIICILDNFDGNSMKVAELLFKNGFKEAYAIRGGLRGKKGWQSIQETL 630
           K V   F DP NT +C+LDNFDGNSMKVAELLFKNGFKEAYAIRGG+RGK GWQ+IQE L
Sbjct: 203 KVVSTKFADPNNTTVCVLDNFDGNSMKVAELLFKNGFKEAYAIRGGIRGKNGWQAIQENL 262

Query: 631 LPPSVHVFPKKG-KASRQLEKKEGTDLQTNPNGQ------VPVNKDEIVENGYINKDGPS 789
           LPPSVH++PKK  K SRQ E   G  ++   N +      VP++  E V+NGY+ K   S
Sbjct: 263 LPPSVHIYPKKKVKMSRQPEVNGGIIIEGEDNSKASSSASVPLDSSETVDNGYVKKPIKS 322

Query: 790 -PQATLGSSRSLSPYPNYPDL 849
            PQA LG SRS SPYPNYPDL
Sbjct: 323 TPQAKLG-SRSSSPYPNYPDL 342


>emb|CAN80760.1| hypothetical protein VITISV_014603 [Vitis vinifera]
          Length = 636

 Score =  325 bits (833), Expect = 1e-86
 Identities = 167/256 (65%), Positives = 200/256 (78%), Gaps = 8/256 (3%)
 Frame = +1

Query: 94  PFPCFATETTFANEQISDRIDLEAILVSIDDFFNRNPFFVSGVTFIWLVVIPLTQEYLRK 273
           P PCFA+ET  +    +D+I+LE+I+VSIDDFFNRNPFFV+GVTFIWLVV+PLTQEYL+K
Sbjct: 85  PLPCFASETVVS---ANDKINLESIVVSIDDFFNRNPFFVAGVTFIWLVVVPLTQEYLKK 141

Query: 274 YKFVSAIDAFQKLKSDPNSQLLDIRDKASLNYLGTPNLKILNKKAVQVEFLEGQEDGFVK 453
           +KF+SAI+AF+KL+ DPN+QLLDIRD  SL YLG+PNLKILNK  VQV+F +  ED F+K
Sbjct: 142 FKFISAINAFRKLRDDPNAQLLDIRDGKSLAYLGSPNLKILNKGVVQVQFSQDDEDAFLK 201

Query: 454 KVLQNFKDPGNTIICILDNFDGNSMKVAELLFKNGFKEAYAIRGGLRGKKGWQSIQETLL 633
            V   F DP NT +C+LDNFDGNSMKVAELLFKNGFKEAYAIRGG+RGK GWQ+IQE LL
Sbjct: 202 SVSTKFADPKNTTVCVLDNFDGNSMKVAELLFKNGFKEAYAIRGGIRGKNGWQAIQENLL 261

Query: 634 PPSVHVFPKKG-KASRQLEKKEGTDLQTNPNGQ------VPVNKDEIVENGYINKDGPS- 789
           PPSVH++PKK  K SRQ E   G  ++   N +      VP++  E V+NGY+ K   S 
Sbjct: 262 PPSVHIYPKKKVKMSRQPEVNGGIIIEGEDNSKASSSASVPLDSSETVDNGYVKKPIKST 321

Query: 790 PQATLGSSRSLSPYPN 837
           PQA LG SRS SPYPN
Sbjct: 322 PQAKLG-SRSSSPYPN 336


>ref|XP_002303025.1| predicted protein [Populus trichocarpa] gi|222844751|gb|EEE82298.1|
           predicted protein [Populus trichocarpa]
          Length = 327

 Score =  303 bits (777), Expect = 4e-80
 Identities = 164/278 (58%), Positives = 203/278 (73%), Gaps = 14/278 (5%)
 Frame = +1

Query: 43  ETSFLKFTMALITAFCAPFPCFATET-TFANEQISDRIDLEAILVSIDDFFNRNPFFVSG 219
           +T+F   T+ L T+     PC A+ET T   EQ+SD+I+LE+ILVSIDDFFN+NPFFV+G
Sbjct: 57  KTTFSFTTIQLFTSL----PCLASETLTSQTEQVSDKINLESILVSIDDFFNKNPFFVAG 112

Query: 220 VTFIWLVVIPLTQEYLRKYKFVSAIDAFQKLKSDPNSQLLDIRDKASLNYLGTPNLKILN 399
            TFIWLVVIPLT+EYLRKYKFVSAIDAF+KL+ +P++QLLDIRD+ S+  LG+PNLK+ +
Sbjct: 113 CTFIWLVVIPLTEEYLRKYKFVSAIDAFRKLRDNPDAQLLDIRDRRSVIALGSPNLKMFD 172

Query: 400 KKAVQVEFLEGQEDGFVKKVLQNFKDPGNTIICILDNFDGNSMKVAELLFKNGFKEAYAI 579
           K  VQVEF EG E GFVK VL+NF+DP NT +CILDNFDG+SM+VAELLFKNGFKEAYAI
Sbjct: 173 KSVVQVEFPEGDEGGFVKNVLKNFQDPANTSLCILDNFDGDSMRVAELLFKNGFKEAYAI 232

Query: 580 RGGLRGKKGWQSIQETLLPPSVHVFPKK-------------GKASRQLEKKEGTDLQTNP 720
           RGG+RGKKGW  IQETLLPPSVH+ PKK             G  ++Q + ++G    T+ 
Sbjct: 233 RGGVRGKKGWLEIQETLLPPSVHMKPKKKKKKAKVSQLGVNGGVAQQNDGEDGIPSSTS- 291

Query: 721 NGQVPVNKDEIVENGYINKDGPSPQATLGSSRSLSPYP 834
               P+   + V+NG+INK   S        R  SPYP
Sbjct: 292 ---FPLEGSQSVDNGHINKPMTSTPHVEIDFR--SPYP 324


>ref|XP_003624244.1| Hydroxyproline-rich glycoprotein-like protein [Medicago truncatula]
           gi|355499259|gb|AES80462.1| Hydroxyproline-rich
           glycoprotein-like protein [Medicago truncatula]
          Length = 355

 Score =  293 bits (749), Expect = 6e-77
 Identities = 155/288 (53%), Positives = 202/288 (70%), Gaps = 9/288 (3%)
 Frame = +1

Query: 13  HCSIPFKNHKETSFLKFTMALITAFCAPFPCFATETTFANEQISDRIDLEAILVSIDDFF 192
           H  IP +N  + S   F+ ++I  F  PF   A E     E  + RI+LE+ILVSIDDFF
Sbjct: 59  HSPIPLQNLFKKS--TFSFSIINLF-TPFQSLAVEAPTLTESDAGRINLESILVSIDDFF 115

Query: 193 NRNPFFVSGVTFIWLVVIPLTQEYLRKYKFVSAIDAFQKLKSDPNSQLLDIRDKASLNYL 372
           NR PFFV+G +FI+LV IPL +EY RKYKFVSAIDAF+KL+ + +SQLLDIRD+ ++ +L
Sbjct: 116 NRYPFFVAGCSFIYLVAIPLAEEYFRKYKFVSAIDAFRKLRDEADSQLLDIRDRKNVKFL 175

Query: 373 GTPNLKILNKKAVQVEFLEGQEDGFVKKVLQNFKDPGNTIICILDNFDGNSMKVAELLFK 552
           G+P+LK++NK+ VQ EF+EG EDGFVKKVL+ FKD  NT + +LD+FDGNSMKVAELLFK
Sbjct: 176 GSPSLKMVNKEVVQFEFVEGNEDGFVKKVLERFKDASNTAVFVLDSFDGNSMKVAELLFK 235

Query: 553 NGFKEAYAIRGGLRGKKGWQSIQETLLPPSVHV-FPKKGKASRQLEKKEGTDLQTNPN-- 723
           NGFKEAYAI+GG+RG++GW +IQ+TLLPPSVH+   KK K  ++L       +Q + N  
Sbjct: 236 NGFKEAYAIKGGVRGQQGWMAIQDTLLPPSVHINRRKKTKVPKELNTNGNGAIQQSDNKN 295

Query: 724 -----GQVPVNKDEIVENGYINKDGPS-PQATLGSSRSLSPYPNYPDL 849
                   P   ++  EN ++ K   S P+  + S  S SPYPNYPDL
Sbjct: 296 ESLVSSDTPAVGNQETENDHVKKSVESNPEMKISSVVSSSPYPNYPDL 343


>ref|XP_002527287.1| chitinase, putative [Ricinus communis] gi|223533380|gb|EEF35131.1|
           chitinase, putative [Ricinus communis]
          Length = 315

 Score =  291 bits (744), Expect = 2e-76
 Identities = 153/232 (65%), Positives = 180/232 (77%), Gaps = 12/232 (5%)
 Frame = +1

Query: 43  ETSFLKFTMALITAFCAPFPCFATET-TFANEQISDRIDLEAILVSIDDFFNRNPFFVSG 219
           +TS    T+ L+T+     P  A+ET T   EQ+SD+I LE+ILVSIDDF NRNPFFV+G
Sbjct: 60  KTSVSFTTIQLLTSL----PSLASETLTSQAEQVSDKISLESILVSIDDFNNRNPFFVAG 115

Query: 220 VTFIWLVVIPLTQEYLRKYKFVSAIDAFQKLKSDPNSQLLDIRDKASLNYLGTPNLKILN 399
            TFIWLVVIPLTQ YLRKYKF+SAI+AF+KLK D ++QLLDIRDK S+  LG+PNLKIL+
Sbjct: 116 CTFIWLVVIPLTQRYLRKYKFISAINAFRKLKEDKDAQLLDIRDKKSVKALGSPNLKILD 175

Query: 400 KKAVQVEFLEGQEDGFVKKVLQNFKDPGNTIICILDNFDGNSMKVAELLFKNGFKEAYAI 579
           K  VQV F E  EDGFVK VL+ F DP NT +CILDNFDGNS++VAELL KNGFKEAYAI
Sbjct: 176 KSVVQVMFSEEDEDGFVKNVLEKFPDPANTTMCILDNFDGNSIRVAELLVKNGFKEAYAI 235

Query: 580 RGGLRGKKGWQSIQETLLPPSVHVFPKKGKA-----------SRQLEKKEGT 702
           +GG+RGKKGW  IQETLLPPSVH++PKK KA           SRQ+E+K GT
Sbjct: 236 KGGVRGKKGWLEIQETLLPPSVHMYPKKKKAKILQLGINGGVSRQMEEKNGT 287


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