BLASTX nr result

ID: Coptis23_contig00025623 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025623
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329388.1| predicted protein [Populus trichocarpa] gi|2...   108   6e-22
emb|CBI17200.3| unnamed protein product [Vitis vinifera]              107   1e-21
emb|CBI17210.3| unnamed protein product [Vitis vinifera]              105   5e-21
ref|XP_002533395.1| ankyrin repeat-containing protein, putative ...   105   5e-21
emb|CAN70274.1| hypothetical protein VITISV_003041 [Vitis vinifera]   105   5e-21

>ref|XP_002329388.1| predicted protein [Populus trichocarpa] gi|222870438|gb|EEF07569.1|
           predicted protein [Populus trichocarpa]
          Length = 206

 Score =  108 bits (269), Expect = 6e-22
 Identities = 63/122 (51%), Positives = 81/122 (66%), Gaps = 11/122 (9%)
 Frame = -2

Query: 333 QQIQKVSESHLVVATLIATVTFAAAFALPGGYKND-GPDEGMATLLRKTSFEVFAISNTI 157
           + + K  ESHLVVA LIATVTFAAAF LPGGYKND GP+EG A L++K +F VF IS+ +
Sbjct: 49  EAMSKARESHLVVAALIATVTFAAAFTLPGGYKNDQGPNEGTAILVKKAAFIVFVISDAM 108

Query: 156 AMVFSSLAVCIHFVMKLI---------DHDEKTYSLLIK-AFLCTFVAISAMMLAFVTGT 7
           +MV S LAV IHF+   I         + DE+T   L + A L T + +  M++AF+TGT
Sbjct: 109 SMVLSILAVFIHFLTAFIQGFKMEKNKEIDEETIEKLFEVATLLTMIGMGTMIIAFITGT 168

Query: 6   YA 1
            A
Sbjct: 169 CA 170


>emb|CBI17200.3| unnamed protein product [Vitis vinifera]
          Length = 645

 Score =  107 bits (267), Expect = 1e-21
 Identities = 56/117 (47%), Positives = 76/117 (64%)
 Frame = -2

Query: 354 KYREKITQQIQKVSESHLVVATLIATVTFAAAFALPGGYKNDGPDEGMATLLRKTSFEVF 175
           +Y+EK T +++K  E+HL+V+ LI TVTFAA F LPGGYK D   +G A L +K +F  F
Sbjct: 485 EYKEKYTSELRKQGETHLIVSALITTVTFAAGFTLPGGYKED---DGKAILSKKAAFGAF 541

Query: 174 AISNTIAMVFSSLAVCIHFVMKLIDHDEKTYSLLIKAFLCTFVAISAMMLAFVTGTY 4
            +++TIAMV S  AV +HF M +   DE     L+ AF+ T V + AM +AF TG Y
Sbjct: 542 VVTDTIAMVSSLCAVFLHFFMTMRKDDEFLEKHLLWAFIFTMVGMGAMAIAFATGLY 598


>emb|CBI17210.3| unnamed protein product [Vitis vinifera]
          Length = 1006

 Score =  105 bits (261), Expect = 5e-21
 Identities = 56/118 (47%), Positives = 74/118 (62%)
 Frame = -2

Query: 354  KYREKITQQIQKVSESHLVVATLIATVTFAAAFALPGGYKNDGPDEGMATLLRKTSFEVF 175
            K R++   Q+QK  E+HL+V+ LI TVTFAA F LPGGYK D   +G A L +K +F  F
Sbjct: 834  KERKEYISQLQKQGETHLIVSALITTVTFAAGFTLPGGYKED---DGQAILSKKAAFRAF 890

Query: 174  AISNTIAMVFSSLAVCIHFVMKLIDHDEKTYSLLIKAFLCTFVAISAMMLAFVTGTYA 1
             +++TIAMV S  AV +HF M +    E     L+ AF  T V + AM +AF TG+YA
Sbjct: 891  VVTDTIAMVSSLCAVLLHFFMTMRQRGEYLEKHLLWAFSLTMVGMGAMAIAFATGSYA 948



 Score =  102 bits (254), Expect = 3e-20
 Identities = 58/123 (47%), Positives = 78/123 (63%)
 Frame = -2

Query: 369 QEMHGKYREKITQQIQKVSESHLVVATLIATVTFAAAFALPGGYKNDGPDEGMATLLRKT 190
           QE+  + +E I+Q +QK  E+HL+V+ LI TVTFAA F LPGGYK D   +G A L +K 
Sbjct: 250 QEIEQERKEYISQ-LQKQGETHLIVSALITTVTFAAGFTLPGGYKED---DGQAILSKKA 305

Query: 189 SFEVFAISNTIAMVFSSLAVCIHFVMKLIDHDEKTYSLLIKAFLCTFVAISAMMLAFVTG 10
           +F  F +++TIAMV S  AV +HF+M L    +     L+ AF  T V + AM +AF TG
Sbjct: 306 AFRAFVVTDTIAMVSSLCAVFLHFLMTLHKRGKFLEKHLLWAFSLTMVGMGAMAIAFATG 365

Query: 9   TYA 1
            YA
Sbjct: 366 LYA 368


>ref|XP_002533395.1| ankyrin repeat-containing protein, putative [Ricinus communis]
           gi|223526769|gb|EEF28995.1| ankyrin repeat-containing
           protein, putative [Ricinus communis]
          Length = 575

 Score =  105 bits (261), Expect = 5e-21
 Identities = 53/110 (48%), Positives = 79/110 (71%), Gaps = 2/110 (1%)
 Frame = -2

Query: 324 QKVSESHLVVATLIATVTFAAAFALPGGYKN--DGPDEGMATLLRKTSFEVFAISNTIAM 151
           ++  +SH+VVA L+ATVTFAAAF LPGGY++  D  D+G+A L + ++F+ F I++ IAM
Sbjct: 426 ERARDSHIVVAALVATVTFAAAFTLPGGYRSNDDEKDQGVAILGKNSAFKAFLITDAIAM 485

Query: 150 VFSSLAVCIHFVMKLIDHDEKTYSLLIKAFLCTFVAISAMMLAFVTGTYA 1
           V S+ ++ IHF + L  + ++   L++ AF C   AI AM++AFVTGTYA
Sbjct: 486 VLSTSSLFIHFTLALHGYRQRFMWLMVYAFRCIVFAIEAMVVAFVTGTYA 535


>emb|CAN70274.1| hypothetical protein VITISV_003041 [Vitis vinifera]
          Length = 1398

 Score =  105 bits (261), Expect = 5e-21
 Identities = 53/108 (49%), Positives = 75/108 (69%)
 Frame = -2

Query: 327 IQKVSESHLVVATLIATVTFAAAFALPGGYKNDGPDEGMATLLRKTSFEVFAISNTIAMV 148
           ++K  E+HL+V TLIAT+TFAA F LPGGYK+D   +GMA L +KT+F++F +++T A+V
Sbjct: 473 MKKKGENHLLVVTLIATITFAAGFTLPGGYKDD---DGMAILSKKTAFKIFVVADTTALV 529

Query: 147 FSSLAVCIHFVMKLIDHDEKTYSLLIKAFLCTFVAISAMMLAFVTGTY 4
            S  AVC++F M L +  E  +  L   F  T  AI+AMM+AF+ G Y
Sbjct: 530 LSMAAVCVYFXMALNNRKEVLHDFLNWGFNLTMYAIAAMMIAFMMGLY 577



 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 47/109 (43%), Positives = 72/109 (66%)
 Frame = -2

Query: 327  IQKVSESHLVVATLIATVTFAAAFALPGGYKNDGPDEGMATLLRKTSFEVFAISNTIAMV 148
            ++KV E+HL+V  L+ATVTFAA F LPGGY  +   +G+ATL +K +F+ F +++T+AMV
Sbjct: 1099 LKKVGETHLIVTALVATVTFAAGFTLPGGYNEN---DGLATLGKKEAFKAFVVADTLAMV 1155

Query: 147  FSSLAVCIHFVMKLIDHDEKTYSLLIKAFLCTFVAISAMMLAFVTGTYA 1
             S  A  ++F M   + +E  +  L   F  T  ++ AM++AF+TG YA
Sbjct: 1156 SSVSAAFVYFFMAGYEKEELLHKHLPWGFFLTMFSMGAMVVAFMTGMYA 1204



 Score = 49.3 bits (116), Expect(2) = 6e-07
 Identities = 21/38 (55%), Positives = 29/38 (76%)
 Frame = -2

Query: 345  EKITQQIQKVSESHLVVATLIATVTFAAAFALPGGYKN 232
            +K    +++  E+HL+VA LIATVTFAA F LPGGY++
Sbjct: 1263 DKHLSSLRRAGETHLIVAALIATVTFAAGFTLPGGYRD 1300



 Score = 28.9 bits (63), Expect(2) = 6e-07
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -1

Query: 211  GNSTEKNIF*SFCYIKYHSNGFLISCCL 128
            G   +++IF S C ++YHS+  L  CC+
Sbjct: 1297 GYRDKESIFQSICCVRYHSDDPLSRCCM 1324


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