BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025609
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|2...   277   6e-73
ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic ...   273   8e-72
ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, p...   270   9e-71
ref|XP_004160105.1| PREDICTED: DNA polymerase epsilon catalytic ...   266   2e-69
ref|XP_004145799.1| PREDICTED: DNA polymerase epsilon catalytic ...   266   2e-69

>ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|222837682|gb|EEE76047.1|
           predicted protein [Populus trichocarpa]
          Length = 2221

 Score =  277 bits (709), Expect = 6e-73
 Identities = 135/158 (85%), Positives = 144/158 (91%)
 Frame = -3

Query: 476 TVQQLMLVRNDLLPVVQRNQEKIDTAEAYESILTGKSNQRHQDFIECIVDLREYDVPFHV 297
           TVQQLM V+ DLL VV+RNQ K D AEAYESILTGK  QR QDF++CI+DLREYDVP+HV
Sbjct: 146 TVQQLMDVKRDLLHVVERNQAKSDAAEAYESILTGKREQRPQDFLDCIIDLREYDVPYHV 205

Query: 296 RFAIDNDLRCGQWYDVSVSSTGVILEKRTDLLQRAEVHVCAFDIETTKLPLKFPDAEIDS 117
           RFAIDND+RCGQWYDVSVSSTGV LEKRTDLLQRAEVHVCAFDIETTKLPLKFPDA+ D 
Sbjct: 206 RFAIDNDIRCGQWYDVSVSSTGVKLEKRTDLLQRAEVHVCAFDIETTKLPLKFPDADYDL 265

Query: 116 IMMISYMVDGQGYLIINRECVWEDIEDLEYTPKPEFEG 3
           IMMISYMVDGQGYLI NRECV EDIEDLEYTPKPE+EG
Sbjct: 266 IMMISYMVDGQGYLITNRECVGEDIEDLEYTPKPEYEG 303


>ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic subunit A [Vitis
           vinifera]
          Length = 2214

 Score =  273 bits (699), Expect = 8e-72
 Identities = 133/159 (83%), Positives = 145/159 (91%)
 Frame = -3

Query: 479 DTVQQLMLVRNDLLPVVQRNQEKIDTAEAYESILTGKSNQRHQDFIECIVDLREYDVPFH 300
           D VQQLM V++DLL VV+RN+ K D AEAYESILTGKS QR QDFI+ IVDLREYDVP+H
Sbjct: 144 DNVQQLMHVKSDLLHVVERNRAKFDAAEAYESILTGKSKQRTQDFIDYIVDLREYDVPYH 203

Query: 299 VRFAIDNDLRCGQWYDVSVSSTGVILEKRTDLLQRAEVHVCAFDIETTKLPLKFPDAEID 120
           VRFAID D+RCGQWYDV+VSS GV+LE+RTDLLQRAEVHVCAFDIETTKLPLKFPDAE D
Sbjct: 204 VRFAIDKDVRCGQWYDVNVSSAGVMLERRTDLLQRAEVHVCAFDIETTKLPLKFPDAEYD 263

Query: 119 SIMMISYMVDGQGYLIINRECVWEDIEDLEYTPKPEFEG 3
            +MMISYMVDGQGYLIINRECV EDIE+LEYTPKPEFEG
Sbjct: 264 LVMMISYMVDGQGYLIINRECVGEDIEELEYTPKPEFEG 302


>ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, putative [Ricinus
           communis] gi|223531477|gb|EEF33309.1| DNA polymerase
           epsilon, catalytic subunit, putative [Ricinus communis]
          Length = 2227

 Score =  270 bits (690), Expect = 9e-71
 Identities = 128/158 (81%), Positives = 145/158 (91%)
 Frame = -3

Query: 476 TVQQLMLVRNDLLPVVQRNQEKIDTAEAYESILTGKSNQRHQDFIECIVDLREYDVPFHV 297
           TVQQLM V+ DL  VV+RN+ K DTA+AYES+LTG+  QR QDF++CIVDLREYDVP+HV
Sbjct: 147 TVQQLMDVKKDLSHVVERNRAKFDTADAYESLLTGRREQRPQDFLDCIVDLREYDVPYHV 206

Query: 296 RFAIDNDLRCGQWYDVSVSSTGVILEKRTDLLQRAEVHVCAFDIETTKLPLKFPDAEIDS 117
           RFAIDND+RCGQWYDVSVSS+GV+LE+RTDLLQRAEV +CAFDIETTKLPLKFPDA+ D 
Sbjct: 207 RFAIDNDIRCGQWYDVSVSSSGVMLERRTDLLQRAEVRICAFDIETTKLPLKFPDADYDL 266

Query: 116 IMMISYMVDGQGYLIINRECVWEDIEDLEYTPKPEFEG 3
           IMMISYM+DGQG+LIINRECV EDIEDLEYTPKPEFEG
Sbjct: 267 IMMISYMIDGQGFLIINRECVGEDIEDLEYTPKPEFEG 304


>ref|XP_004160105.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like, partial
           [Cucumis sativus]
          Length = 2051

 Score =  266 bits (679), Expect = 2e-69
 Identities = 128/159 (80%), Positives = 142/159 (89%)
 Frame = -3

Query: 479 DTVQQLMLVRNDLLPVVQRNQEKIDTAEAYESILTGKSNQRHQDFIECIVDLREYDVPFH 300
           DTVQ+LM V+++L+ VV+ N  K D AEAY+SIL GK  Q+ QDF+ECI+DLREYDVP+H
Sbjct: 145 DTVQELMNVKSELVHVVENNWAKSDAAEAYDSILFGKREQKPQDFLECIIDLREYDVPYH 204

Query: 299 VRFAIDNDLRCGQWYDVSVSSTGVILEKRTDLLQRAEVHVCAFDIETTKLPLKFPDAEID 120
           VRFAID+DLRCGQWYDVSVSSTGV LEKR DLLQRAEVH+CAFDIETTKLPLKFPDAE D
Sbjct: 205 VRFAIDHDLRCGQWYDVSVSSTGVTLEKRKDLLQRAEVHICAFDIETTKLPLKFPDAEYD 264

Query: 119 SIMMISYMVDGQGYLIINRECVWEDIEDLEYTPKPEFEG 3
            IMMISYMVDG GYLIINRECV EDIE+LEYTPKPEFEG
Sbjct: 265 MIMMISYMVDGNGYLIINRECVGEDIENLEYTPKPEFEG 303


>ref|XP_004145799.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Cucumis
           sativus]
          Length = 2206

 Score =  266 bits (679), Expect = 2e-69
 Identities = 128/159 (80%), Positives = 142/159 (89%)
 Frame = -3

Query: 479 DTVQQLMLVRNDLLPVVQRNQEKIDTAEAYESILTGKSNQRHQDFIECIVDLREYDVPFH 300
           DTVQ+LM V+++L+ VV+ N  K D AEAY+SIL GK  Q+ QDF+ECI+DLREYDVP+H
Sbjct: 145 DTVQELMNVKSELVHVVENNWAKSDAAEAYDSILFGKREQKPQDFLECIIDLREYDVPYH 204

Query: 299 VRFAIDNDLRCGQWYDVSVSSTGVILEKRTDLLQRAEVHVCAFDIETTKLPLKFPDAEID 120
           VRFAID+DLRCGQWYDVSVSSTGV LEKR DLLQRAEVH+CAFDIETTKLPLKFPDAE D
Sbjct: 205 VRFAIDHDLRCGQWYDVSVSSTGVTLEKRKDLLQRAEVHICAFDIETTKLPLKFPDAEYD 264

Query: 119 SIMMISYMVDGQGYLIINRECVWEDIEDLEYTPKPEFEG 3
            IMMISYMVDG GYLIINRECV EDIE+LEYTPKPEFEG
Sbjct: 265 MIMMISYMVDGNGYLIINRECVGEDIENLEYTPKPEFEG 303