BLASTX nr result

ID: Coptis23_contig00025595 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025595
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541815.1| PREDICTED: probable LRR receptor-like serine...    62   5e-08
ref|XP_002523452.1| serine-threonine protein kinase, plant-type,...    61   8e-08
ref|XP_003619091.1| LRR receptor-like serine/threonine-protein k...    60   2e-07
ref|XP_003619087.1| Receptor-like protein kinase [Medicago trunc...    60   2e-07
ref|XP_002448922.1| hypothetical protein SORBIDRAFT_05g001640 [S...    60   2e-07

>ref|XP_003541815.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At3g47570-like [Glycine max]
          Length = 993

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 27/64 (42%), Positives = 40/64 (62%)
 Frame = -2

Query: 192 NNLSGYIPPSLGNISTXXXXXXXXXXXLGNIPDDLCRSRNLSFFQLASNGLTGKVPSCLY 13
           NNL+G +PPS+GN+S+            G IP ++C  +NLS   +  N L+G +P+CLY
Sbjct: 154 NNLTGEVPPSIGNLSSLIELSVGLNNLEGKIPQEVCSLKNLSLMSVPVNKLSGTLPTCLY 213

Query: 12  NLSN 1
           NLS+
Sbjct: 214 NLSS 217


>ref|XP_002523452.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223537280|gb|EEF38911.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 724

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 33/87 (37%), Positives = 44/87 (50%)
 Frame = -2

Query: 261 KLSGNIXXXXXXXXXXXXXXXXLNNLSGYIPPSLGNISTXXXXXXXXXXXLGNIPDDLCR 82
           KL+G I                 N LSG IPPS+GNIS+            G +PD+L R
Sbjct: 153 KLTGKIPAEFGSLSKLLVLSLEANKLSGTIPPSVGNISSLEELFLLANHLQGQLPDELSR 212

Query: 81  SRNLSFFQLASNGLTGKVPSCLYNLSN 1
              L  FQ++ N LTG++P  LYN+S+
Sbjct: 213 LHKLFKFQISDNNLTGEIPRHLYNISS 239


>ref|XP_003619091.1| LRR receptor-like serine/threonine-protein kinase EFR, partial
           [Medicago truncatula] gi|355494106|gb|AES75309.1| LRR
           receptor-like serine/threonine-protein kinase EFR,
           partial [Medicago truncatula]
          Length = 465

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/64 (42%), Positives = 40/64 (62%)
 Frame = -2

Query: 192 NNLSGYIPPSLGNISTXXXXXXXXXXXLGNIPDDLCRSRNLSFFQLASNGLTGKVPSCLY 13
           NNL G IP  +GN+S+            G+IP ++C  ++L+F  L  N L+GK+PSCLY
Sbjct: 184 NNLIGGIPSFIGNLSSLTRLLVSENNFEGDIPQEICFLKHLTFLALNENNLSGKIPSCLY 243

Query: 12  NLSN 1
           N+S+
Sbjct: 244 NISS 247


>ref|XP_003619087.1| Receptor-like protein kinase [Medicago truncatula]
           gi|355494102|gb|AES75305.1| Receptor-like protein kinase
           [Medicago truncatula]
          Length = 1023

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 26/64 (40%), Positives = 42/64 (65%)
 Frame = -2

Query: 192 NNLSGYIPPSLGNISTXXXXXXXXXXXLGNIPDDLCRSRNLSFFQLASNGLTGKVPSCLY 13
           NNL+G IP  +GN+S+            G+IP ++C  ++L++  L+ N L+GK+PSCLY
Sbjct: 190 NNLTGGIPSFIGNLSSLTRLSVSENNFEGDIPQEICFLKHLTYLGLSVNNLSGKIPSCLY 249

Query: 12  NLSN 1
           N+S+
Sbjct: 250 NISS 253


>ref|XP_002448922.1| hypothetical protein SORBIDRAFT_05g001640 [Sorghum bicolor]
           gi|241934765|gb|EES07910.1| hypothetical protein
           SORBIDRAFT_05g001640 [Sorghum bicolor]
          Length = 1046

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/63 (47%), Positives = 36/63 (57%)
 Frame = -2

Query: 192 NNLSGYIPPSLGNISTXXXXXXXXXXXLGNIPDDLCRSRNLSFFQLASNGLTGKVPSCLY 13
           NN SG IPPSL N+S             G+IP+DL R  NL F  LA N L+G +P  L+
Sbjct: 181 NNFSGMIPPSLANLSALQELYLAFNQLEGSIPEDLGRLSNLEFLALAENNLSGTIPPTLF 240

Query: 12  NLS 4
           NLS
Sbjct: 241 NLS 243


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