BLASTX nr result

ID: Coptis23_contig00025592 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025592
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55551.1| mutator-like transposase [Rosa rugosa]                  78   6e-13
ref|XP_002451319.1| hypothetical protein SORBIDRAFT_05g027680 [S...    75   5e-12
ref|XP_002268620.1| PREDICTED: uncharacterized protein LOC100247...    74   1e-11
emb|CAN81145.1| hypothetical protein VITISV_020810 [Vitis vinifera]    74   1e-11
ref|XP_002302803.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11

>gb|AFP55551.1| mutator-like transposase [Rosa rugosa]
          Length = 721

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 39/102 (38%), Positives = 60/102 (58%)
 Frame = +1

Query: 4   PLIKPGEIIDHFLRVYGVNLNYYFAHTGIDLALKEIHGDHALSYHQLHWYVGKLKETNLG 183
           P  KP +I D     YG+++ Y     G +LA   +HGD A SY QL W+   + ++N  
Sbjct: 252 PNKKPIDIADEIKSDYGLDVAYRTVWYGTELAKTALHGDEAESYAQLLWFSESVMKSNPD 311

Query: 184 SHVVLENESTTGKFKRLFVAFGACIHGFNFCRPMLCLDGTFM 309
           S +V+E    T +F+R+FV++GA +  F  CRP+L +D TF+
Sbjct: 312 SRIVVEFHRETHRFQRMFVSYGAWMKSFQSCRPILFIDATFI 353


>ref|XP_002451319.1| hypothetical protein SORBIDRAFT_05g027680 [Sorghum bicolor]
           gi|241937162|gb|EES10307.1| hypothetical protein
           SORBIDRAFT_05g027680 [Sorghum bicolor]
          Length = 817

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 44/99 (44%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
 Frame = +1

Query: 4   PLIKPGEIIDHFLRVYGVNLNYYFAHTGIDLALKEIHGDHALSYHQLHWYVGKLKETNLG 183
           P  KP E++      YGV L Y     G ++A KEI+     +  QL WY  +L+ETN G
Sbjct: 348 PKFKPKELVKELFEEYGVTLTYSQVWRGKEVAEKEIYHAIRETRDQLPWYCQRLEETNPG 407

Query: 184 SHVVLENESTTGKFKRLFVAFGACIHGF-NFCRPMLCLD 297
           S  VL +     K++R FVAF AC+HGF N CRP+L LD
Sbjct: 408 SISVL-SPVVDMKYRRFFVAFHACLHGFVNGCRPLLFLD 445


>ref|XP_002268620.1| PREDICTED: uncharacterized protein LOC100247698 [Vitis vinifera]
          Length = 746

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 41/101 (40%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
 Frame = +1

Query: 4   PLIKPGEIIDHFLRVYGVNLNYYFAHTGIDLALKEIHGDHALSYHQLHWYVGKLKETNLG 183
           P  KP +I D   R YG+ LNY  A    ++A +++ G +  +Y QL ++  K+KETN G
Sbjct: 280 PNYKPKDIADDIKREYGIQLNYSQAWRAKEIAREQLQGSYKEAYSQLPFFCEKIKETNPG 339

Query: 184 SHVVLENESTTGKFKRLFVAFGACIHGF-NFCRPMLCLDGT 303
           S    E +  +  F RLF++F A I GF   CRP+L LD T
Sbjct: 340 SFATFETKEDS-SFHRLFISFHAAISGFQQGCRPLLFLDST 379


>emb|CAN81145.1| hypothetical protein VITISV_020810 [Vitis vinifera]
          Length = 1147

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 41/101 (40%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
 Frame = +1

Query: 4   PLIKPGEIIDHFLRVYGVNLNYYFAHTGIDLALKEIHGDHALSYHQLHWYVGKLKETNLG 183
           P  KP +I D   R YG+ LNY  A    ++A +++ G +  +Y QL ++  K+KETN G
Sbjct: 298 PNYKPKDIADDIKREYGIQLNYSQAWRAKEIAREQLQGSYKEAYSQLPFFCEKIKETNPG 357

Query: 184 SHVVLENESTTGKFKRLFVAFGACIHGF-NFCRPMLCLDGT 303
           S    E +  +  F RLF++F A I GF   CRP+L LD T
Sbjct: 358 SFATFETKEDS-SFHRLFISFHAAISGFQQGCRPLLFLDST 397


>ref|XP_002302803.1| predicted protein [Populus trichocarpa] gi|222844529|gb|EEE82076.1|
           predicted protein [Populus trichocarpa]
          Length = 573

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
 Frame = +1

Query: 4   PLIKPGEIIDHFLRVYGVNLNYYFAHTGIDLALKEIHGDHALSYHQLHWYVGKLKETNLG 183
           P +KP EI +   + +G+ L Y      ++ A +EI G +  +Y+QL W   K+ ETN G
Sbjct: 110 PNVKPKEIANQIQQEFGIELRYSQVRRWMEAATEEIQGSYREAYNQLPWLCEKIVETNPG 169

Query: 184 SHVVLENESTTGKFKRLFVAFGACIHGF-NFCRPMLCLD 297
           + V L      G F RLFVAF A +HGF + CRP+L LD
Sbjct: 170 TAVSLNTREDLG-FHRLFVAFHASLHGFQSGCRPLLFLD 207


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