BLASTX nr result

ID: Coptis23_contig00025591 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025591
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320261.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
ref|XP_002302803.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
gb|AFP55551.1| mutator-like transposase [Rosa rugosa]                  70   2e-10
ref|XP_002451698.1| hypothetical protein SORBIDRAFT_04g006220 [S...    69   3e-10
dbj|BAJ96539.1| predicted protein [Hordeum vulgare subsp. vulgar...    69   4e-10

>ref|XP_002320261.1| predicted protein [Populus trichocarpa] gi|222861034|gb|EEE98576.1|
           predicted protein [Populus trichocarpa]
          Length = 573

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 35/105 (33%), Positives = 60/105 (57%)
 Frame = +1

Query: 46  RHCLINNYRVLIKKNDPDRVTTECYLKTETGCLWRVHASKKYKMSKFFEIKTMEAKHTCG 225
           ++ +   + +  KKND  RV+ +C +    GC WR+ AS+    +  F IK +   HTCG
Sbjct: 27  KYSIAQGFTIKFKKNDSMRVSAKCSVD---GCPWRIFASR-LSTTHLFRIKRLNEIHTCG 82

Query: 226 AGFADVNNPPVNSKLVKSIVLDMVRDKPLIKPSEIIDHFLRVYGV 360
           AG +  ++P  + K+V+ IV + +RD P +KP EI +   + +G+
Sbjct: 83  AGTSTDSHPRASKKVVEGIVKEKLRDSPNVKPKEIANQIQQEFGI 127


>ref|XP_002302803.1| predicted protein [Populus trichocarpa] gi|222844529|gb|EEE82076.1|
           predicted protein [Populus trichocarpa]
          Length = 573

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 37/110 (33%), Positives = 60/110 (54%)
 Frame = +1

Query: 31  RVELLRHCLINNYRVLIKKNDPDRVTTECYLKTETGCLWRVHASKKYKMSKFFEIKTMEA 210
           R  L ++ +   + V  KKND  RV+ +C +    GC WR+ AS+    +  F IK +  
Sbjct: 22  RDALRKYSIAQGFTVKFKKNDSMRVSVKCSVD---GCPWRIFASR-LSTTHLFRIKRLNE 77

Query: 211 KHTCGAGFADVNNPPVNSKLVKSIVLDMVRDKPLIKPSEIIDHFLRVYGV 360
            HTCGAG    ++P  + K+V+ IV + + D P +KP EI +   + +G+
Sbjct: 78  IHTCGAGTGTDSHPRASKKVVEGIVKEKLHDSPNVKPKEIANQIQQEFGI 127


>gb|AFP55551.1| mutator-like transposase [Rosa rugosa]
          Length = 721

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 43/121 (35%), Positives = 60/121 (49%)
 Frame = +1

Query: 1   QKFLGGAANFRVELLRHCLINNYRVLIKKNDPDRVTTECYLKTETGCLWRVHASKKYKMS 180
           QKF GG   FR +L ++ +   +     +ND  RV  +C  K   GC W V A    + +
Sbjct: 151 QKFEGGVVEFRDKLRKYAIEIGFSYEFVRNDKVRVIAQCSKKHSQGCNWLVKAYL-CRAN 209

Query: 181 KFFEIKTMEAKHTCGAGFADVNNPPVNSKLVKSIVLDMVRDKPLIKPSEIIDHFLRVYGV 360
            FF IK +   HTC        +  + SK+VKSIVLD +R  P  KP +I D     YG+
Sbjct: 210 GFFMIKRLVNVHTCHGVIRLQKSKMMGSKVVKSIVLDKIRANPNKKPIDIADEIKSDYGL 269

Query: 361 N 363
           +
Sbjct: 270 D 270


>ref|XP_002451698.1| hypothetical protein SORBIDRAFT_04g006220 [Sorghum bicolor]
           gi|241931529|gb|EES04674.1| hypothetical protein
           SORBIDRAFT_04g006220 [Sorghum bicolor]
          Length = 719

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 39/114 (34%), Positives = 61/114 (53%)
 Frame = +1

Query: 19  AANFRVELLRHCLINNYRVLIKKNDPDRVTTECYLKTETGCLWRVHASKKYKMSKFFEIK 198
           A  FR  L ++ + + +     KND  RVT EC   T+ GC WR+HASK +  SK F +K
Sbjct: 154 AKEFRDALHKYAIAHRFHYKFVKNDSSRVTAEC---TDGGCAWRIHASKSH--SKEFMVK 208

Query: 199 TMEAKHTCGAGFADVNNPPVNSKLVKSIVLDMVRDKPLIKPSEIIDHFLRVYGV 360
            +   HTC +     ++   + K V S++ + +RD P  +P +I +   R YG+
Sbjct: 209 KVFGTHTCESETIK-SHRLASQKWVASVIKEKIRDSPNYRPRDIANDLQREYGL 261


>dbj|BAJ96539.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326531422|dbj|BAK05586.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 720

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 39/116 (33%), Positives = 60/116 (51%)
 Frame = +1

Query: 16  GAANFRVELLRHCLINNYRVLIKKNDPDRVTTECYLKTETGCLWRVHASKKYKMSKFFEI 195
           G   FR  L ++ + + +     KND  RVT EC   T+ GC WR+HASK     +F  I
Sbjct: 153 GPKEFRDALHKYAIAHRFHYRFVKNDSSRVTVEC---TDEGCPWRIHASKSSANQEFM-I 208

Query: 196 KTMEAKHTCGAGFADVNNPPVNSKLVKSIVLDMVRDKPLIKPSEIIDHFLRVYGVN 363
           K +   HTC +     +N   + K V S++ + +RD P  +P +I +   R YG++
Sbjct: 209 KKVVGSHTCESESVK-SNRLASQKWVASVIKEKLRDSPNYRPRDIANDLQREYGLS 263


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