BLASTX nr result

ID: Coptis23_contig00025581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025581
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26560.3| unnamed protein product [Vitis vinifera]               72   4e-11
ref|XP_002267685.2| PREDICTED: uncharacterized protein LOC100255...    67   2e-09
emb|CBI37413.3| unnamed protein product [Vitis vinifera]               65   4e-09
emb|CAN77849.1| hypothetical protein VITISV_020833 [Vitis vinifera]    64   2e-08
ref|XP_002274960.2| PREDICTED: DNA (cytosine-5)-methyltransferas...    62   5e-08

>emb|CBI26560.3| unnamed protein product [Vitis vinifera]
          Length = 847

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 35/71 (49%), Positives = 44/71 (61%)
 Frame = +3

Query: 3   YSTFHTMVTDNXXXXXXXXXXXVIQETDMHGANPDLINIPSCKPAKSEISLLDLYSGCGG 182
           YSTF TM  DN            ++   M+G  P+   + S KP K E++LLD+YSGCGG
Sbjct: 230 YSTFCTMEVDNSADRTNLSTSACLKTVHMNGIKPEFNRMSSHKPYKPELALLDIYSGCGG 289

Query: 183 MSTGLCLGAKI 215
           MSTGLCLGAK+
Sbjct: 290 MSTGLCLGAKL 300


>ref|XP_002267685.2| PREDICTED: uncharacterized protein LOC100255190 [Vitis vinifera]
          Length = 1789

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 37/78 (47%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
 Frame = +3

Query: 3    YSTFHTMVTDNXXXXXXXXXXXVIQET---DMHGANPDLINIPSCKPAKSEISLLDLYSG 173
            YSTFHT+++             V   T   DM G          CKP K+E++LLDLYSG
Sbjct: 1187 YSTFHTLLSGKISPNCIETPLSVANTTFPEDMDG----------CKPDKAELALLDLYSG 1236

Query: 174  CGGMSTGLCLGAKICPLN 227
            CGGMSTGLCLGAK+  +N
Sbjct: 1237 CGGMSTGLCLGAKLSCVN 1254


>emb|CBI37413.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 36/76 (47%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
 Frame = +3

Query: 3   YSTFHTMVTDNXXXXXXXXXXXVIQETDMHGANPDLI-NIPSCKPAKSEISLLDLYSGCG 179
           YSTFHT+++                ET +  AN     ++  CKP K+E++LLDLYSGCG
Sbjct: 123 YSTFHTLLSVKGYDLVSPNCI----ETPLSVANTTFPEDMDGCKPDKAELALLDLYSGCG 178

Query: 180 GMSTGLCLGAKICPLN 227
           GMSTGLCLGAK+  +N
Sbjct: 179 GMSTGLCLGAKLSCVN 194


>emb|CAN77849.1| hypothetical protein VITISV_020833 [Vitis vinifera]
          Length = 631

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/65 (46%), Positives = 40/65 (61%)
 Frame = +3

Query: 21  MVTDNXXXXXXXXXXXVIQETDMHGANPDLINIPSCKPAKSEISLLDLYSGCGGMSTGLC 200
           +V DN            ++   M+G  P+   + S KP K E++LLD+YSGCGGMSTGLC
Sbjct: 488 VVLDNSADRTNLSTSACLKTVHMNGIKPEFNRMSSHKPYKPELALLDIYSGCGGMSTGLC 547

Query: 201 LGAKI 215
           LGAK+
Sbjct: 548 LGAKL 552


>ref|XP_002274960.2| PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Vitis
           vinifera]
          Length = 1298

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 27/48 (56%), Positives = 36/48 (75%)
 Frame = +3

Query: 72  IQETDMHGANPDLINIPSCKPAKSEISLLDLYSGCGGMSTGLCLGAKI 215
           ++   M+G  P+   + S KP K E++LLD+YSGCGGMSTGLCLGAK+
Sbjct: 704 LKTVHMNGIKPEFNRMSSHKPYKPELALLDIYSGCGGMSTGLCLGAKL 751


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