BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025580
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269884.1| PREDICTED: peptide chain release factor 1 [V...   133   2e-29
ref|XP_004160536.1| PREDICTED: peptide chain release factor 1-li...   130   1e-28
ref|XP_003521543.1| PREDICTED: peptide chain release factor 1-li...   126   2e-27
ref|XP_003553645.1| PREDICTED: peptide chain release factor 1-li...   124   1e-26
ref|XP_002520666.1| peptide chain release factor, putative [Rici...   123   2e-26

>ref|XP_002269884.1| PREDICTED: peptide chain release factor 1 [Vitis vinifera]
           gi|296086617|emb|CBI32252.3| unnamed protein product
           [Vitis vinifera]
          Length = 411

 Score =  133 bits (334), Expect = 2e-29
 Identities = 70/110 (63%), Positives = 76/110 (69%)
 Frame = +3

Query: 3   LDEVVSTYRLFKDCEKQLEEAKELSKEDVSDEDMAEMIANEVKTXXXXXXXXXXXXXXXX 182
           LDEVVST++ FKDCEKQLEEAK L+KED  D DMAEMIA E+ T                
Sbjct: 89  LDEVVSTFKRFKDCEKQLEEAKALAKEDGIDADMAEMIAYEIGTLTNQLKELEENIKVLL 148

Query: 183 XXXXXXXXRNILLEVRAGTGGDEAGLWAGDIVRMYQMYSERNSLKYTPVS 332
                   RNILLEVRAGTGGDEAG+WAGD+VRMYQ YSERNS KY PVS
Sbjct: 149 LPSDPLDSRNILLEVRAGTGGDEAGIWAGDLVRMYQKYSERNSWKYAPVS 198


>ref|XP_004160536.1| PREDICTED: peptide chain release factor 1-like [Cucumis sativus]
          Length = 416

 Score =  130 bits (327), Expect = 1e-28
 Identities = 67/110 (60%), Positives = 77/110 (70%)
 Frame = +3

Query: 3   LDEVVSTYRLFKDCEKQLEEAKELSKEDVSDEDMAEMIANEVKTXXXXXXXXXXXXXXXX 182
           LDEVVST+R FK+CEKQLEEAK LSKE  +DEDM EMIA E+ +                
Sbjct: 94  LDEVVSTFRKFKECEKQLEEAKALSKESGNDEDMVEMIALEISSLSSELKDIEEKLKVML 153

Query: 183 XXXXXXXXRNILLEVRAGTGGDEAGLWAGDIVRMYQMYSERNSLKYTPVS 332
                   RNI+LEVRAGTGGDEAG+WAGD+VRMYQ YSERNS K++PVS
Sbjct: 154 LPSDPLDARNIMLEVRAGTGGDEAGIWAGDLVRMYQKYSERNSWKFSPVS 203


>ref|XP_003521543.1| PREDICTED: peptide chain release factor 1-like [Glycine max]
          Length = 429

 Score =  126 bits (317), Expect = 2e-27
 Identities = 66/110 (60%), Positives = 75/110 (68%)
 Frame = +3

Query: 3   LDEVVSTYRLFKDCEKQLEEAKELSKEDVSDEDMAEMIANEVKTXXXXXXXXXXXXXXXX 182
           LDEVVSTYR FKDCEK LEE K L+K+D +DEDM EMI+ E+ T                
Sbjct: 107 LDEVVSTYRRFKDCEKVLEETKALAKDDGNDEDMVEMISFEIDTLSKQLAELEEKIKVLL 166

Query: 183 XXXXXXXXRNILLEVRAGTGGDEAGLWAGDIVRMYQMYSERNSLKYTPVS 332
                   RNILLEVRAGTGGDEAG+WAGD+VRMY+ YSERNS KY+ VS
Sbjct: 167 LPSDPMDARNILLEVRAGTGGDEAGIWAGDLVRMYERYSERNSWKYSLVS 216


>ref|XP_003553645.1| PREDICTED: peptide chain release factor 1-like [Glycine max]
          Length = 428

 Score =  124 bits (310), Expect = 1e-26
 Identities = 64/110 (58%), Positives = 75/110 (68%)
 Frame = +3

Query: 3   LDEVVSTYRLFKDCEKQLEEAKELSKEDVSDEDMAEMIANEVKTXXXXXXXXXXXXXXXX 182
           LDEVVSTYR FKDCEK LEE K L+K+D +DEDM EMI+ E+ +                
Sbjct: 106 LDEVVSTYRRFKDCEKVLEETKALAKDDGNDEDMVEMISFEIDSLSKQLAELEEKLKVLL 165

Query: 183 XXXXXXXXRNILLEVRAGTGGDEAGLWAGDIVRMYQMYSERNSLKYTPVS 332
                   +NILLEVRAGTGGDEAG+WAGD+VRMY+ YSERNS KY+ VS
Sbjct: 166 LPSDPMDAKNILLEVRAGTGGDEAGIWAGDLVRMYERYSERNSWKYSLVS 215


>ref|XP_002520666.1| peptide chain release factor, putative [Ricinus communis]
           gi|223540051|gb|EEF41628.1| peptide chain release
           factor, putative [Ricinus communis]
          Length = 370

 Score =  123 bits (308), Expect = 2e-26
 Identities = 64/110 (58%), Positives = 74/110 (67%)
 Frame = +3

Query: 3   LDEVVSTYRLFKDCEKQLEEAKELSKEDVSDEDMAEMIANEVKTXXXXXXXXXXXXXXXX 182
           LD+VVS YR FKDCEKQLEE K L+KE+ +DEDMAEMIA E+ +                
Sbjct: 48  LDQVVSVYRRFKDCEKQLEETKALAKEEGTDEDMAEMIALEIDSLSTELKGLEEKLKVLL 107

Query: 183 XXXXXXXXRNILLEVRAGTGGDEAGLWAGDIVRMYQMYSERNSLKYTPVS 332
                   RNI+LEVRAGTGGDEAGLWAGD+VRMY+ Y E+NS KY  VS
Sbjct: 108 LPSDPLDARNIMLEVRAGTGGDEAGLWAGDLVRMYEKYCEQNSWKYAIVS 157