BLASTX nr result

ID: Coptis23_contig00025568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025568
         (1159 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632537.1| PREDICTED: beta-galactosidase 3-like [Vitis ...   673   0.0  
ref|NP_001234307.1| beta-galactosidase, chloroplastic precursor ...   639   0.0  
gb|ADO34792.1| beta-galactosidase STBG7 [Solanum lycopersicum]        639   0.0  
ref|XP_004147332.1| PREDICTED: beta-galactosidase 3-like [Cucumi...   638   0.0  
ref|XP_003523206.1| PREDICTED: beta-galactosidase 10-like [Glyci...   633   e-179

>ref|XP_003632537.1| PREDICTED: beta-galactosidase 3-like [Vitis vinifera]
            gi|296082595|emb|CBI21600.3| unnamed protein product
            [Vitis vinifera]
          Length = 847

 Score =  673 bits (1737), Expect = 0.0
 Identities = 310/357 (86%), Positives = 331/357 (92%)
 Frame = -1

Query: 1075 TLAANVTYDRRSLIIDGQRKLLLSASIHYPRSVPGMWPGLVKTAKEGGIDVIETYVFWNG 896
            +LAANVTYDRRSLIIDGQRKLL+SASIHYPRSVPGMWPGLVKTAKEGGIDVIETYVFWNG
Sbjct: 18   SLAANVTYDRRSLIIDGQRKLLISASIHYPRSVPGMWPGLVKTAKEGGIDVIETYVFWNG 77

Query: 895  HELSPGNYYFGGRWDLVKFVRIVQQAKMYLILRIGPFVAAEWNFGGVPVWLHYVNGTVFR 716
            HELSP NYYFGGR+DL+KFV+IVQQA+MYLILR+GPFVAAEWNFGGVPVWLHYV GTVFR
Sbjct: 78   HELSPDNYYFGGRYDLLKFVKIVQQARMYLILRVGPFVAAEWNFGGVPVWLHYVPGTVFR 137

Query: 715  TDSEPFKSHMQSFTTFIVNMMKREKFFASQGGPIILAQIENEYGDIESVYGDGGKPYAMW 536
            T+SEPFK HMQ F T IVN+MK+EK FASQGGPIILAQ+ENEYGD E +YGDGGKPYAMW
Sbjct: 138  TNSEPFKYHMQKFMTLIVNIMKKEKLFASQGGPIILAQVENEYGDTERIYGDGGKPYAMW 197

Query: 535  AAKMALSQDTGVPWIMCQQYDAPDPVINTCNSFYCDHFTPNSVNKPKFWTENWPGWFKTF 356
            AA MALSQ+ GVPWIMCQQYDAPDPVINTCNSFYCD FTPNS NKPK WTENWPGWFKTF
Sbjct: 198  AANMALSQNIGVPWIMCQQYDAPDPVINTCNSFYCDQFTPNSPNKPKMWTENWPGWFKTF 257

Query: 355  GSRDPHRPPEDIAYAVARFIQKGGSLNNYYMYHGGTNFGRTSGGPFITTSYDYDAPIDEY 176
            G+ DPHRP EDIA++VARF QKGGSL NYYMYHGGTNFGRTSGGPFITTSYDY+APIDEY
Sbjct: 258  GAPDPHRPHEDIAFSVARFFQKGGSLQNYYMYHGGTNFGRTSGGPFITTSYDYNAPIDEY 317

Query: 175  GVARLPKWGHLKQLHQAIKLCEHALLHGEPTLLSLGPLQEADVYGDSLGGCAAFISN 5
            G+ARLPKWGHLK+LH+AIK CEH LL+GEP  LSLGP QE DVY DS GGCAAFISN
Sbjct: 318  GLARLPKWGHLKELHRAIKSCEHVLLYGEPINLSLGPSQEVDVYTDSSGGCAAFISN 374


>ref|NP_001234307.1| beta-galactosidase, chloroplastic precursor [Solanum lycopersicum]
            gi|7939621|gb|AAF70823.1|AF154422_1 beta-galactosidase
            [Solanum lycopersicum]
          Length = 870

 Score =  639 bits (1648), Expect = 0.0
 Identities = 288/353 (81%), Positives = 321/353 (90%)
 Frame = -1

Query: 1063 NVTYDRRSLIIDGQRKLLLSASIHYPRSVPGMWPGLVKTAKEGGIDVIETYVFWNGHELS 884
            +VTYDRRSLII+GQRKLL+SASIHYPRSVP MWPGLV+ AKEGG+DVIETYVFWNGHE S
Sbjct: 45   SVTYDRRSLIINGQRKLLISASIHYPRSVPAMWPGLVRLAKEGGVDVIETYVFWNGHEPS 104

Query: 883  PGNYYFGGRWDLVKFVRIVQQAKMYLILRIGPFVAAEWNFGGVPVWLHYVNGTVFRTDSE 704
            PGNYYFGGR+DLVKF +I+QQA MY+ILRIGPFVAAEWNFGG+PVWLHYV GT FRTDSE
Sbjct: 105  PGNYYFGGRFDLVKFCKIIQQAGMYMILRIGPFVAAEWNFGGLPVWLHYVPGTTFRTDSE 164

Query: 703  PFKSHMQSFTTFIVNMMKREKFFASQGGPIILAQIENEYGDIESVYGDGGKPYAMWAAKM 524
            PFK HMQ F T+ VN+MKRE+ FASQGGPIIL+Q+ENEYG  E+ YG+GGK YA+WAAKM
Sbjct: 165  PFKYHMQKFMTYTVNLMKRERLFASQGGPIILSQVENEYGYYENAYGEGGKRYALWAAKM 224

Query: 523  ALSQDTGVPWIMCQQYDAPDPVINTCNSFYCDHFTPNSVNKPKFWTENWPGWFKTFGSRD 344
            ALSQ+TGVPWIMCQQYDAPDPVI+TCNSFYCD F P S NKPK WTENWPGWFKTFG+RD
Sbjct: 225  ALSQNTGVPWIMCQQYDAPDPVIDTCNSFYCDQFKPISPNKPKIWTENWPGWFKTFGARD 284

Query: 343  PHRPPEDIAYAVARFIQKGGSLNNYYMYHGGTNFGRTSGGPFITTSYDYDAPIDEYGVAR 164
            PHRP ED+AY+VARF QKGGS+ NYYMYHGGTNFGRT+GGPFITTSYDYDAPIDEYG+ R
Sbjct: 285  PHRPAEDVAYSVARFFQKGGSVQNYYMYHGGTNFGRTAGGPFITTSYDYDAPIDEYGLPR 344

Query: 163  LPKWGHLKQLHQAIKLCEHALLHGEPTLLSLGPLQEADVYGDSLGGCAAFISN 5
             PKWGHLK+LH+ IK CEHALL+ +PTLLSLGPLQEADVY D+ G CAAF++N
Sbjct: 345  FPKWGHLKELHKVIKSCEHALLNNDPTLLSLGPLQEADVYEDASGACAAFLAN 397


>gb|ADO34792.1| beta-galactosidase STBG7 [Solanum lycopersicum]
          Length = 870

 Score =  639 bits (1648), Expect = 0.0
 Identities = 288/353 (81%), Positives = 321/353 (90%)
 Frame = -1

Query: 1063 NVTYDRRSLIIDGQRKLLLSASIHYPRSVPGMWPGLVKTAKEGGIDVIETYVFWNGHELS 884
            +VTYDRRSLII+GQRKLL+SASIHYPRSVP MWPGLV+ AKEGG+DVIETYVFWNGHE S
Sbjct: 45   SVTYDRRSLIINGQRKLLISASIHYPRSVPAMWPGLVRLAKEGGVDVIETYVFWNGHEPS 104

Query: 883  PGNYYFGGRWDLVKFVRIVQQAKMYLILRIGPFVAAEWNFGGVPVWLHYVNGTVFRTDSE 704
            PGNYYFGGR+DLVKF +I+QQA MY+ILRIGPFVAAEWNFGG+PVWLHYV GT FRTDSE
Sbjct: 105  PGNYYFGGRFDLVKFCKIIQQAGMYMILRIGPFVAAEWNFGGLPVWLHYVPGTTFRTDSE 164

Query: 703  PFKSHMQSFTTFIVNMMKREKFFASQGGPIILAQIENEYGDIESVYGDGGKPYAMWAAKM 524
            PFK HMQ F T+ VN+MKRE+ FASQGGPIIL+Q+ENEYG  E+ YG+GGK YA+WAAKM
Sbjct: 165  PFKYHMQKFMTYTVNLMKRERLFASQGGPIILSQVENEYGYYENAYGEGGKRYALWAAKM 224

Query: 523  ALSQDTGVPWIMCQQYDAPDPVINTCNSFYCDHFTPNSVNKPKFWTENWPGWFKTFGSRD 344
            ALSQ+TGVPWIMCQQYDAPDPVI+TCNSFYCD F P S NKPK WTENWPGWFKTFG+RD
Sbjct: 225  ALSQNTGVPWIMCQQYDAPDPVIDTCNSFYCDQFKPISPNKPKIWTENWPGWFKTFGARD 284

Query: 343  PHRPPEDIAYAVARFIQKGGSLNNYYMYHGGTNFGRTSGGPFITTSYDYDAPIDEYGVAR 164
            PHRP ED+AY+VARF QKGGS+ NYYMYHGGTNFGRT+GGPFITTSYDYDAPIDEYG+ R
Sbjct: 285  PHRPAEDVAYSVARFFQKGGSVQNYYMYHGGTNFGRTAGGPFITTSYDYDAPIDEYGLPR 344

Query: 163  LPKWGHLKQLHQAIKLCEHALLHGEPTLLSLGPLQEADVYGDSLGGCAAFISN 5
             PKWGHLK+LH+ IK CEHALL+ +PTLLSLGPLQEADVY D+ G CAAF++N
Sbjct: 345  FPKWGHLKELHKVIKSCEHALLNNDPTLLSLGPLQEADVYEDASGACAAFLAN 397


>ref|XP_004147332.1| PREDICTED: beta-galactosidase 3-like [Cucumis sativus]
            gi|449497145|ref|XP_004160325.1| PREDICTED:
            beta-galactosidase 3-like [Cucumis sativus]
          Length = 844

 Score =  638 bits (1645), Expect = 0.0
 Identities = 293/363 (80%), Positives = 324/363 (89%)
 Frame = -1

Query: 1093 LSLCSVTLAANVTYDRRSLIIDGQRKLLLSASIHYPRSVPGMWPGLVKTAKEGGIDVIET 914
            L LC   LAANVTYDRRSLIIDG RKLL+SASIHYPRSVP MWP L++ AKEGG+DVIET
Sbjct: 14   LPLC---LAANVTYDRRSLIIDGHRKLLISASIHYPRSVPAMWPSLIQNAKEGGVDVIET 70

Query: 913  YVFWNGHELSPGNYYFGGRWDLVKFVRIVQQAKMYLILRIGPFVAAEWNFGGVPVWLHYV 734
            YVFWNGHELSP NY+F GR+DLVKF+ IV  A +YLILRIGPFVAAEWNFGGVPVWLHY+
Sbjct: 71   YVFWNGHELSPDNYHFDGRFDLVKFINIVHNAGLYLILRIGPFVAAEWNFGGVPVWLHYI 130

Query: 733  NGTVFRTDSEPFKSHMQSFTTFIVNMMKREKFFASQGGPIILAQIENEYGDIESVYGDGG 554
              TVFRTD+  FK +MQ FTT+IV++MK+EK FASQGGPIIL+Q+ENEYGDIE VYG+GG
Sbjct: 131  PNTVFRTDNASFKFYMQKFTTYIVSLMKKEKLFASQGGPIILSQVENEYGDIERVYGEGG 190

Query: 553  KPYAMWAAKMALSQDTGVPWIMCQQYDAPDPVINTCNSFYCDHFTPNSVNKPKFWTENWP 374
            KPYAMWAA+MA+SQ+ GVPWIMCQQYDAPDPVINTCNSFYCD FTPNS NKPK WTENWP
Sbjct: 191  KPYAMWAAQMAVSQNIGVPWIMCQQYDAPDPVINTCNSFYCDQFTPNSPNKPKMWTENWP 250

Query: 373  GWFKTFGSRDPHRPPEDIAYAVARFIQKGGSLNNYYMYHGGTNFGRTSGGPFITTSYDYD 194
            GWFKTFG+RDPHRPPEDIA++VARF QKGGSL NYYMYHGGTNFGRT+GGPFITTSYDYD
Sbjct: 251  GWFKTFGARDPHRPPEDIAFSVARFFQKGGSLQNYYMYHGGTNFGRTAGGPFITTSYDYD 310

Query: 193  APIDEYGVARLPKWGHLKQLHQAIKLCEHALLHGEPTLLSLGPLQEADVYGDSLGGCAAF 14
            APIDEYG+ RLPKWGHLK+LH+AIKL E  LL+ EPT +SLGP  EADVY DS G CAAF
Sbjct: 311  APIDEYGLPRLPKWGHLKELHRAIKLTERVLLNSEPTYVSLGPSLEADVYTDSSGACAAF 370

Query: 13   ISN 5
            I+N
Sbjct: 371  IAN 373


>ref|XP_003523206.1| PREDICTED: beta-galactosidase 10-like [Glycine max]
          Length = 843

 Score =  633 bits (1632), Expect = e-179
 Identities = 289/364 (79%), Positives = 325/364 (89%)
 Frame = -1

Query: 1096 LLSLCSVTLAANVTYDRRSLIIDGQRKLLLSASIHYPRSVPGMWPGLVKTAKEGGIDVIE 917
            LL   +V L+ NV+YD RSL+IDGQRKLL+SASIHYPRSVP MWPGLV+TAKEGG+DVIE
Sbjct: 10   LLVTFTVALSGNVSYDGRSLLIDGQRKLLISASIHYPRSVPAMWPGLVQTAKEGGVDVIE 69

Query: 916  TYVFWNGHELSPGNYYFGGRWDLVKFVRIVQQAKMYLILRIGPFVAAEWNFGGVPVWLHY 737
            TYVFWNGHELSPGNYYFGGR+DLVKF + VQQA MYLILRIGPFVAAEWNFGGVPVWLHY
Sbjct: 70   TYVFWNGHELSPGNYYFGGRFDLVKFAKTVQQAGMYLILRIGPFVAAEWNFGGVPVWLHY 129

Query: 736  VNGTVFRTDSEPFKSHMQSFTTFIVNMMKREKFFASQGGPIILAQIENEYGDIESVYGDG 557
            V GTVFRT ++PF  HMQ FTT+IVN+MK+EK FASQGGPIIL+QIENEYG  E+ Y + 
Sbjct: 130  VPGTVFRTYNQPFMYHMQKFTTYIVNLMKQEKLFASQGGPIILSQIENEYGYYENFYKED 189

Query: 556  GKPYAMWAAKMALSQDTGVPWIMCQQYDAPDPVINTCNSFYCDHFTPNSVNKPKFWTENW 377
            GK YA+WAAKMA+SQ+TGVPWIMCQQ+DAPDPVI+TCNSFYCD FTP S N+PK WTENW
Sbjct: 190  GKKYALWAAKMAVSQNTGVPWIMCQQWDAPDPVIDTCNSFYCDQFTPTSPNRPKIWTENW 249

Query: 376  PGWFKTFGSRDPHRPPEDIAYAVARFIQKGGSLNNYYMYHGGTNFGRTSGGPFITTSYDY 197
            PGWFKTFG RDPHRP ED+A++VARF QKGGS++NYYMYHGGTNFGRT+GGPFITTSYDY
Sbjct: 250  PGWFKTFGGRDPHRPAEDVAFSVARFFQKGGSVHNYYMYHGGTNFGRTAGGPFITTSYDY 309

Query: 196  DAPIDEYGVARLPKWGHLKQLHQAIKLCEHALLHGEPTLLSLGPLQEADVYGDSLGGCAA 17
            DAP+DEYG+ RLPKWGHLK+LH+AIKLCEH LL+G+   +SLGP  EADVY DS G CAA
Sbjct: 310  DAPVDEYGLPRLPKWGHLKELHRAIKLCEHVLLNGKSVNISLGPSVEADVYTDSSGACAA 369

Query: 16   FISN 5
            FISN
Sbjct: 370  FISN 373


Top