BLASTX nr result

ID: Coptis23_contig00025565 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025565
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269300.1| PREDICTED: light-regulated protein [Vitis vi...    73   2e-11
ref|XP_004145699.1| PREDICTED: light-regulated protein-like [Cuc...    72   5e-11
gb|ACV88397.1| GA-like protein [Cucumis sativus]                       72   5e-11
ref|XP_004170126.1| PREDICTED: LOW QUALITY PROTEIN: light-regula...    72   6e-11
gb|ADN33702.1| cytokinin-repressed protein CR9 [Cucumis melo sub...    72   6e-11

>ref|XP_002269300.1| PREDICTED: light-regulated protein [Vitis vinifera]
           gi|296088179|emb|CBI35671.3| unnamed protein product
           [Vitis vinifera]
          Length = 139

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 30/37 (81%), Positives = 34/37 (91%)
 Frame = -2

Query: 233 VDREYLDYEDQKTVFPGEACDDLGGEFCQPEYQKGVY 123
           VDREYL+Y   KTVFPGEACDDLGGEFC+PEYQ+GV+
Sbjct: 100 VDREYLEYNSPKTVFPGEACDDLGGEFCEPEYQEGVF 136


>ref|XP_004145699.1| PREDICTED: light-regulated protein-like [Cucumis sativus]
          Length = 140

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 29/37 (78%), Positives = 33/37 (89%)
 Frame = -2

Query: 233 VDREYLDYEDQKTVFPGEACDDLGGEFCQPEYQKGVY 123
           +DREYLDY D KTVFPGEACDDLGGEFC+PE+  GV+
Sbjct: 104 IDREYLDYADSKTVFPGEACDDLGGEFCEPEFLNGVF 140


>gb|ACV88397.1| GA-like protein [Cucumis sativus]
          Length = 137

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 29/37 (78%), Positives = 33/37 (89%)
 Frame = -2

Query: 233 VDREYLDYEDQKTVFPGEACDDLGGEFCQPEYQKGVY 123
           +DREYLDY D KTVFPGEACDDLGGEFC+PE+  GV+
Sbjct: 101 IDREYLDYADSKTVFPGEACDDLGGEFCEPEFLNGVF 137


>ref|XP_004170126.1| PREDICTED: LOW QUALITY PROTEIN: light-regulated protein-like
           [Cucumis sativus]
          Length = 137

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 30/37 (81%), Positives = 32/37 (86%)
 Frame = -2

Query: 233 VDREYLDYEDQKTVFPGEACDDLGGEFCQPEYQKGVY 123
           V+REYL Y+  KTVFP EACDDLGGEFC PEYQKGVY
Sbjct: 101 VEREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY 137


>gb|ADN33702.1| cytokinin-repressed protein CR9 [Cucumis melo subsp. melo]
          Length = 106

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 30/37 (81%), Positives = 32/37 (86%)
 Frame = -2

Query: 233 VDREYLDYEDQKTVFPGEACDDLGGEFCQPEYQKGVY 123
           V+REYL Y+  KTVFP EACDDLGGEFC PEYQKGVY
Sbjct: 70  VEREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY 106


Top