BLASTX nr result

ID: Coptis23_contig00025562 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025562
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526985.1| Nuclease S1 precursor, putative [Ricinus com...   197   1e-48
gb|AAD00694.1| bifunctional nuclease [Zinnia violacea]                183   1e-44
ref|XP_002282886.1| PREDICTED: nuclease S1 isoform 2 [Vitis vini...   181   4e-44
ref|XP_002282829.1| PREDICTED: nuclease S1 isoform 1 [Vitis vini...   181   4e-44
ref|XP_004135088.1| PREDICTED: endonuclease 2-like [Cucumis sati...   177   8e-43

>ref|XP_002526985.1| Nuclease S1 precursor, putative [Ricinus communis]
           gi|223533620|gb|EEF35357.1| Nuclease S1 precursor,
           putative [Ricinus communis]
          Length = 291

 Score =  197 bits (500), Expect = 1e-48
 Identities = 89/104 (85%), Positives = 99/104 (95%), Gaps = 2/104 (1%)
 Frame = -3

Query: 308 LLPAYADNDLGSVCSWADHMKFRYHWSSALHYIDTPDSLCTYQYNRDCKDESGEKGRCVA 129
           LLP YA+NDLGS+CSWADH+KFRYHWSSALHYIDTPDSLC YQY+RDC DE+GEKGRCVA
Sbjct: 53  LLPEYANNDLGSICSWADHVKFRYHWSSALHYIDTPDSLCNYQYHRDCMDENGEKGRCVA 112

Query: 128 GAINNYTNQLLTYSSSSS--EYNLTEALLFLSHYIGDIHQPLHV 3
           GAINNYT+QLLTY+S+SS  EYNLTEALLFLSH++GDIHQPLHV
Sbjct: 113 GAINNYTSQLLTYNSASSQAEYNLTEALLFLSHFVGDIHQPLHV 156


>gb|AAD00694.1| bifunctional nuclease [Zinnia violacea]
          Length = 280

 Score =  183 bits (464), Expect = 1e-44
 Identities = 81/102 (79%), Positives = 89/102 (87%)
 Frame = -3

Query: 308 LLPAYADNDLGSVCSWADHMKFRYHWSSALHYIDTPDSLCTYQYNRDCKDESGEKGRCVA 129
           LLP YA+ DL S+CSWADH+KFRYHWSSALHYIDTPD+LCTYQY RDCKDE G  GRCVA
Sbjct: 46  LLPEYAEGDLASLCSWADHVKFRYHWSSALHYIDTPDNLCTYQYRRDCKDEDGVMGRCVA 105

Query: 128 GAINNYTNQLLTYSSSSSEYNLTEALLFLSHYIGDIHQPLHV 3
           GAI NYT QLL Y   +S+YNLTEALLFLSH++GDIHQPLHV
Sbjct: 106 GAIMNYTTQLLDYGKQTSQYNLTEALLFLSHFMGDIHQPLHV 147


>ref|XP_002282886.1| PREDICTED: nuclease S1 isoform 2 [Vitis vinifera]
          Length = 293

 Score =  181 bits (460), Expect = 4e-44
 Identities = 80/102 (78%), Positives = 91/102 (89%)
 Frame = -3

Query: 308 LLPAYADNDLGSVCSWADHMKFRYHWSSALHYIDTPDSLCTYQYNRDCKDESGEKGRCVA 129
           LLPA AD+DL S+CSWAD +KFRYHWSS LH+++TPD LCTYQY RDCKDE G KGRCVA
Sbjct: 51  LLPASADDDLASLCSWADRVKFRYHWSSPLHFLNTPDDLCTYQYTRDCKDEDGVKGRCVA 110

Query: 128 GAINNYTNQLLTYSSSSSEYNLTEALLFLSHYIGDIHQPLHV 3
           GAINNYT+QLLTY SS ++YNLTEALLFLSH +GD+HQPLHV
Sbjct: 111 GAINNYTSQLLTYGSSQADYNLTEALLFLSHLMGDVHQPLHV 152


>ref|XP_002282829.1| PREDICTED: nuclease S1 isoform 1 [Vitis vinifera]
           gi|297737807|emb|CBI27008.3| unnamed protein product
           [Vitis vinifera]
          Length = 285

 Score =  181 bits (460), Expect = 4e-44
 Identities = 80/102 (78%), Positives = 91/102 (89%)
 Frame = -3

Query: 308 LLPAYADNDLGSVCSWADHMKFRYHWSSALHYIDTPDSLCTYQYNRDCKDESGEKGRCVA 129
           LLPA AD+DL S+CSWAD +KFRYHWSS LH+++TPD LCTYQY RDCKDE G KGRCVA
Sbjct: 51  LLPASADDDLASLCSWADRVKFRYHWSSPLHFLNTPDDLCTYQYTRDCKDEDGVKGRCVA 110

Query: 128 GAINNYTNQLLTYSSSSSEYNLTEALLFLSHYIGDIHQPLHV 3
           GAINNYT+QLLTY SS ++YNLTEALLFLSH +GD+HQPLHV
Sbjct: 111 GAINNYTSQLLTYGSSQADYNLTEALLFLSHLMGDVHQPLHV 152


>ref|XP_004135088.1| PREDICTED: endonuclease 2-like [Cucumis sativus]
           gi|449519637|ref|XP_004166841.1| PREDICTED: endonuclease
           2-like [Cucumis sativus]
          Length = 288

 Score =  177 bits (449), Expect = 8e-43
 Identities = 82/104 (78%), Positives = 92/104 (88%), Gaps = 2/104 (1%)
 Frame = -3

Query: 308 LLPAYADNDLGSVCSWADHMKFRYHWSSALHYIDTPDSLCTYQYNRDCKDESGEKGRCVA 129
           LLP  A  DL SVC WAD +KFRY WS  LH+IDTPDSLCTYQY+RDCKDE+GEKGRCVA
Sbjct: 51  LLPESAQGDLASVCIWADRVKFRYRWSPPLHFIDTPDSLCTYQYDRDCKDEAGEKGRCVA 110

Query: 128 GAINNYTNQLLTYSS--SSSEYNLTEALLFLSHYIGDIHQPLHV 3
           GAINNYT+QLLTY++  S+SEYNLTEALLFLSH++GDIHQPLHV
Sbjct: 111 GAINNYTSQLLTYNAQPSNSEYNLTEALLFLSHFMGDIHQPLHV 154


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