BLASTX nr result

ID: Coptis23_contig00025559 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025559
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634178.1| PREDICTED: uncharacterized protein LOC100853...   154   9e-36
ref|XP_002521303.1| conserved hypothetical protein [Ricinus comm...   152   4e-35
ref|XP_002321952.1| predicted protein [Populus trichocarpa] gi|2...   145   4e-33
ref|XP_003519233.1| PREDICTED: uncharacterized protein LOC100784...   143   1e-32
ref|XP_002317834.1| predicted protein [Populus trichocarpa] gi|2...   143   1e-32

>ref|XP_003634178.1| PREDICTED: uncharacterized protein LOC100853393 [Vitis vinifera]
          Length = 121

 Score =  154 bits (388), Expect = 9e-36
 Identities = 77/119 (64%), Positives = 89/119 (74%)
 Frame = +2

Query: 95  MENLQIVPAYKNVEAQYVEMMVPLYSHGCERKVKKALSNLKGIYSVSVDYKLQKVTIWGI 274
           M NLQIVPA  NVEAQYVEMMVPLYS+GCE+KVKK L+ +KGIYSV+VDY  QKVT+WGI
Sbjct: 1   MANLQIVPASNNVEAQYVEMMVPLYSYGCEKKVKKTLAGIKGIYSVNVDYNQQKVTVWGI 60

Query: 275 CNKFDVLATIRSKRKEACFWNSEDIDNGPCITHQPTKSAFIPLLRSLSWKAWKNAIIRS 451
           CNK+DVL T+R+KRKEA FWN ED          P K   +  +RSLSWKAW+    RS
Sbjct: 61  CNKYDVLTTMRTKRKEARFWNDEDNAEMEEPVKDP-KPMTLTRVRSLSWKAWRMVFKRS 118


>ref|XP_002521303.1| conserved hypothetical protein [Ricinus communis]
           gi|223539488|gb|EEF41077.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 130

 Score =  152 bits (383), Expect = 4e-35
 Identities = 80/127 (62%), Positives = 91/127 (71%), Gaps = 8/127 (6%)
 Frame = +2

Query: 95  MENLQIVPAYKNVEAQYVEMMVPLYSHGCERKVKKALSNLKGIYSVSVDYKLQKVTIWGI 274
           M N+QIVPA KNVEAQYVEM+VPLYS+GCERKV+K LS+LKGIYSV+VDY  QKVT+WGI
Sbjct: 1   MANMQIVPASKNVEAQYVEMVVPLYSYGCERKVRKTLSHLKGIYSVNVDYYQQKVTVWGI 60

Query: 275 CNKFDVLATIRSKRKEACFWNSEDIDNGPCITHQPTKS-AFIPLLR-------SLSWKAW 430
           CNK+DVLAT++SKRKEA FWN ED          P  S  F P L        SL+WKAW
Sbjct: 61  CNKYDVLATMKSKRKEARFWNEEDNITQTEKKESPLSSPPFKPALSLLKAHSLSLNWKAW 120

Query: 431 KNAIIRS 451
                RS
Sbjct: 121 TKVFTRS 127


>ref|XP_002321952.1| predicted protein [Populus trichocarpa] gi|222868948|gb|EEF06079.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score =  145 bits (365), Expect = 4e-33
 Identities = 81/135 (60%), Positives = 95/135 (70%), Gaps = 16/135 (11%)
 Frame = +2

Query: 95  MENLQIVPAY--KNVEAQYVEMMVPLYSHGCERKVKKALSNLKGIYSVSVDYKLQKVTIW 268
           M ++QIV A   KNVEAQ+VEMMVPLYSHGCE+KVKK LS+LKGIYSV+VDY  QKVT+W
Sbjct: 1   MASMQIVLASSCKNVEAQHVEMMVPLYSHGCEKKVKKTLSHLKGIYSVNVDYYQQKVTVW 60

Query: 269 GICNKFDVLATIRSKRKEACFWNSEDID----NGPCITHQPTK-SAFIP---------LL 406
           GICNK DVLATI+SKRKEA FWN ++++      P     P K S+ IP         L 
Sbjct: 61  GICNKHDVLATIKSKRKEARFWNPQEMEEEESQPPSPPPPPPKDSSTIPSLTLMKARSLT 120

Query: 407 RSLSWKAWKNAIIRS 451
           RSLSWK WK    R+
Sbjct: 121 RSLSWKVWKKVFTRT 135


>ref|XP_003519233.1| PREDICTED: uncharacterized protein LOC100784160 [Glycine max]
          Length = 123

 Score =  143 bits (361), Expect = 1e-32
 Identities = 68/85 (80%), Positives = 76/85 (89%), Gaps = 1/85 (1%)
 Frame = +2

Query: 95  MENLQIVPAYKN-VEAQYVEMMVPLYSHGCERKVKKALSNLKGIYSVSVDYKLQKVTIWG 271
           M N+QIVPAYK  VEAQYVEMMVPLYS+GCE+K+KK LSNLKGIYSV+VDY  QKVT+WG
Sbjct: 1   MANMQIVPAYKTIVEAQYVEMMVPLYSYGCEKKIKKTLSNLKGIYSVNVDYYQQKVTVWG 60

Query: 272 ICNKFDVLATIRSKRKEACFWNSED 346
           ICNK+DVL T+RSKRKEA FWN ED
Sbjct: 61  ICNKYDVLETVRSKRKEAQFWNQED 85


>ref|XP_002317834.1| predicted protein [Populus trichocarpa] gi|222858507|gb|EEE96054.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score =  143 bits (361), Expect = 1e-32
 Identities = 80/135 (59%), Positives = 94/135 (69%), Gaps = 19/135 (14%)
 Frame = +2

Query: 104 LQIVPAY--KNVEAQYVEMMVPLYSHGCERKVKKALSNLKGIYSVSVDYKLQKVTIWGIC 277
           +QIV A   +NVEAQYVEM+VPLYSHGCE+KVKK LS+LKGIYSV+VDY  QKVT+WGIC
Sbjct: 1   MQIVLASNCENVEAQYVEMIVPLYSHGCEKKVKKTLSHLKGIYSVNVDYYQQKVTVWGIC 60

Query: 278 NKFDVLATIRSKRKEACFWN-------SEDIDNGPCITHQPTK-SAFIP---------LL 406
           NK+DVLAT++SKRKEA FWN        ED ++ P  +  P K S  IP         L 
Sbjct: 61  NKYDVLATVKSKRKEARFWNPQDNVQMEEDEESQPPSSPPPPKDSKTIPSLTLMKARSLT 120

Query: 407 RSLSWKAWKNAIIRS 451
           RSLSWK WK    R+
Sbjct: 121 RSLSWKVWKKVFTRT 135


Top