BLASTX nr result

ID: Coptis23_contig00025556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025556
         (1418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634232.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   367   e-175
ref|XP_002511248.1| Ubiquinone biosynthesis protein coq-8, putat...   352   e-170
ref|XP_003550862.1| PREDICTED: probable serine/threonine-protein...   348   e-168
emb|CBI14863.3| unnamed protein product [Vitis vinifera]              339   e-167
ref|XP_003525637.1| PREDICTED: uncharacterized aarF domain-conta...   341   e-167

>ref|XP_003634232.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein in
           hydrogenase 1 5'region-like [Vitis vinifera]
          Length = 480

 Score =  367 bits (941), Expect(2) = e-175
 Identities = 177/230 (76%), Positives = 205/230 (89%)
 Frame = -3

Query: 909 QVLVMDFVDGIPILNLGDEIAKRGINPGGKVAAAAKQNILKSLMLVYGQMILKSGFFHAD 730
           +VLVM+++DGIPILNLGDEIAKRGINPGGK+AAAAKQ IL+SL + YGQMILKSGFFHAD
Sbjct: 248 RVLVMEYIDGIPILNLGDEIAKRGINPGGKLAAAAKQKILESLTIAYGQMILKSGFFHAD 307

Query: 729 PHPGNILICKGSQVALLDYGQVKDLPDNLRLGFANMILAIADDDPTRASQSYRQLGIETL 550
           PHPGNILICKGS+VALLDYGQVKDLPD LR+G+AN+ILAIAD+DP +AS+SYR+LGIETL
Sbjct: 308 PHPGNILICKGSEVALLDYGQVKDLPDKLRIGYANLILAIADNDPVKASESYRELGIETL 367

Query: 549 SKCKDEQKEMLKLAQSMFDTKLPAGSKMLQPFSEDSSLKKIAVQSFPEELFCVLRTVHLL 370
           S CKDEQ E+ KLAQ+MFDTKLP G  MLQPF+EDSS+KK+ VQ+FPEELF +LRTVHLL
Sbjct: 368 SNCKDEQNELFKLAQTMFDTKLPPGVVMLQPFAEDSSIKKVGVQAFPEELFSILRTVHLL 427

Query: 369 RGLSVGMGINISCAEQWRSIAEEALHDAGRIEGKDLKGMVHKRGFVRRIF 220
           RGLSVG+GIN SCA+QWR IAEEAL  AGR++ KD+K    +  F RRIF
Sbjct: 428 RGLSVGLGINYSCADQWRPIAEEALVRAGRLKDKDVKSRARQSSFFRRIF 477



 Score =  277 bits (709), Expect(2) = e-175
 Identities = 134/171 (78%), Positives = 155/171 (90%)
 Frame = -1

Query: 1418 GFFLKVAQIIGKPDLAPPAWVRRLITLCDRAPATPFEVVQLVLERELGCSVGEVFERFDA 1239
            GFFLK+AQIIGKPDLAP AWVRRL+TLCDRAPATPF+ +Q VLE+ELG S+GE+FERFD 
Sbjct: 77   GFFLKIAQIIGKPDLAPAAWVRRLVTLCDRAPATPFDAIQPVLEKELGQSIGEIFERFDV 136

Query: 1238 EPLGSASIAQVHRARLKGAKGDVAVKVQHPGGQDLMMTDIHNLQAFALYLQKSDIKFDLF 1059
            +P+GSASIAQVHRARL+G K DV VKVQHPG QDLMMTDI NLQAFALY+QK+DIKFDL+
Sbjct: 137  DPIGSASIAQVHRARLRGDKNDVVVKVQHPGVQDLMMTDIRNLQAFALYMQKTDIKFDLY 196

Query: 1058 SVTQELIAQIGYEFDFLREAEAMERIQRFLCVHNKKPPVLVPSVVRNMVTR 906
            SVT+E+  QIGYEFDF+REA+AMERI+RFL  +NKK PVLVP V+R+MVTR
Sbjct: 197  SVTKEMEKQIGYEFDFIREADAMERIKRFLYENNKKRPVLVPRVIRDMVTR 247


>ref|XP_002511248.1| Ubiquinone biosynthesis protein coq-8, putative [Ricinus communis]
           gi|223550363|gb|EEF51850.1| Ubiquinone biosynthesis
           protein coq-8, putative [Ricinus communis]
          Length = 503

 Score =  352 bits (902), Expect(2) = e-170
 Identities = 178/247 (72%), Positives = 210/247 (85%), Gaps = 18/247 (7%)
 Frame = -3

Query: 909 QVLVMDFVDGIPILNLGDEIAKRGINPGGKVAAAAKQNILKSLMLVYGQMILKSGFFHAD 730
           +VLVM++VDGIPILNLGDEIAKRGINPGGK+A  AKQNILKSL L YGQMILKSGFFHAD
Sbjct: 251 RVLVMEYVDGIPILNLGDEIAKRGINPGGKIATTAKQNILKSLTLAYGQMILKSGFFHAD 310

Query: 729 PHPGNILICKGS----QVALLDYGQVKDLPDNLRLGFANMILAIADDDPTRASQSYRQLG 562
           PHPGNILICKGS    QVALLDYGQVKDLPD+LRLG+AN+++A+AD+DP +AS+SYR+LG
Sbjct: 311 PHPGNILICKGSEASHQVALLDYGQVKDLPDSLRLGYANLVVAMADNDPIKASESYRELG 370

Query: 561 IETLSKCKDEQKEMLKLAQSMFDTKLPAGSKMLQPFSEDSSLKKIAVQSFPEELFCVLRT 382
           I TLSKC++E +E+LKLAQ+MFDTKLP G  +LQPF+EDSS+KKIAV++FPEELF VLRT
Sbjct: 371 IGTLSKCENELQELLKLAQTMFDTKLPPGVVILQPFTEDSSIKKIAVEAFPEELFSVLRT 430

Query: 381 VHLLRGLSVGMGINISCAEQWRSIAEEALHDAGRIEG--------------KDLKGMVHK 244
           VHLLRGLSVG+GIN SCAEQWR IAEEAL++AGR++G               +LK  V K
Sbjct: 431 VHLLRGLSVGLGINYSCAEQWRPIAEEALYEAGRLKGGLLVPHCCETKTFETELKTRVRK 490

Query: 243 RGFVRRI 223
           R  +RR+
Sbjct: 491 RRLLRRL 497



 Score =  273 bits (698), Expect(2) = e-170
 Identities = 135/171 (78%), Positives = 152/171 (88%)
 Frame = -1

Query: 1418 GFFLKVAQIIGKPDLAPPAWVRRLITLCDRAPATPFEVVQLVLERELGCSVGEVFERFDA 1239
            GFFLKVAQ+IGKPDLAP AWVRRL+TLCDRAPATPF  VQ VLE+ELG S+GE+FERFDA
Sbjct: 80   GFFLKVAQVIGKPDLAPTAWVRRLVTLCDRAPATPFNTVQFVLEKELGQSIGEMFERFDA 139

Query: 1238 EPLGSASIAQVHRARLKGAKGDVAVKVQHPGGQDLMMTDIHNLQAFALYLQKSDIKFDLF 1059
            +PLGSASIAQVHRARLKG K DVAVKVQHPG Q+LMMTDI NLQAFALY+Q +DIKFDL+
Sbjct: 140  DPLGSASIAQVHRARLKGDKTDVAVKVQHPGVQELMMTDIRNLQAFALYMQNTDIKFDLY 199

Query: 1058 SVTQELIAQIGYEFDFLREAEAMERIQRFLCVHNKKPPVLVPSVVRNMVTR 906
            SVT+E+  QIGYEFDF+REA AMERI+ FL  +NKK PV VP V++NMVTR
Sbjct: 200  SVTKEMEKQIGYEFDFVREANAMERIRHFLYENNKKSPVSVPRVLKNMVTR 250


>ref|XP_003550862.1| PREDICTED: probable serine/threonine-protein kinase abkB-like
           [Glycine max]
          Length = 475

 Score =  348 bits (894), Expect(2) = e-168
 Identities = 170/217 (78%), Positives = 196/217 (90%)
 Frame = -3

Query: 909 QVLVMDFVDGIPILNLGDEIAKRGINPGGKVAAAAKQNILKSLMLVYGQMILKSGFFHAD 730
           +VLVM+++DGIPI+NLGDEIAKRGINP GKVA AAKQ IL+SL L YGQMILKSGFFHAD
Sbjct: 251 RVLVMEYIDGIPIMNLGDEIAKRGINPHGKVATAAKQKILQSLTLAYGQMILKSGFFHAD 310

Query: 729 PHPGNILICKGSQVALLDYGQVKDLPDNLRLGFANMILAIADDDPTRASQSYRQLGIETL 550
           PHPGNILICKGS+VALLDYGQVKDLPD LRL +AN++LAIA+ DP RA++SYR+LGIET 
Sbjct: 311 PHPGNILICKGSEVALLDYGQVKDLPDQLRLAYANLVLAIANGDPLRAAESYRELGIETF 370

Query: 549 SKCKDEQKEMLKLAQSMFDTKLPAGSKMLQPFSEDSSLKKIAVQSFPEELFCVLRTVHLL 370
           +KC++E +E+ KLAQ+MFDTKLP G  MLQPFSE+SS+KKIAVQSFPEELF VLRTVHLL
Sbjct: 371 TKCENELQELFKLAQTMFDTKLPPGVVMLQPFSEESSIKKIAVQSFPEELFSVLRTVHLL 430

Query: 369 RGLSVGMGINISCAEQWRSIAEEALHDAGRIEGKDLK 259
           RGLSVG+GIN SCAEQWR  AEEAL  AGR++GKD+K
Sbjct: 431 RGLSVGLGINYSCAEQWRPFAEEALSRAGRLKGKDVK 467



 Score =  271 bits (692), Expect(2) = e-168
 Identities = 132/171 (77%), Positives = 151/171 (88%)
 Frame = -1

Query: 1418 GFFLKVAQIIGKPDLAPPAWVRRLITLCDRAPATPFEVVQLVLERELGCSVGEVFERFDA 1239
            GFFLK+AQIIGKPDLAP AWV+RL+TLCDRAP TPF+VV+LVLE ELG  + +VF+RFD 
Sbjct: 80   GFFLKIAQIIGKPDLAPAAWVKRLVTLCDRAPPTPFDVVKLVLENELGQGINDVFDRFDV 139

Query: 1238 EPLGSASIAQVHRARLKGAKGDVAVKVQHPGGQDLMMTDIHNLQAFALYLQKSDIKFDLF 1059
            EPLGSASIAQVHRARLKG  GDV VKVQHPG QDLMMTDIHNLQAFALY+QK+DIKFDL+
Sbjct: 140  EPLGSASIAQVHRARLKGDTGDVVVKVQHPGIQDLMMTDIHNLQAFALYMQKTDIKFDLY 199

Query: 1058 SVTQELIAQIGYEFDFLREAEAMERIQRFLCVHNKKPPVLVPSVVRNMVTR 906
            SVT+E+  QIGYEFDF REA AM+RI++FL  +NKK PVLVP V+ +MVTR
Sbjct: 200  SVTKEMEKQIGYEFDFTREANAMQRIRKFLYENNKKSPVLVPRVIHDMVTR 250


>emb|CBI14863.3| unnamed protein product [Vitis vinifera]
          Length = 479

 Score =  339 bits (870), Expect(2) = e-167
 Identities = 168/230 (73%), Positives = 196/230 (85%)
 Frame = -3

Query: 909 QVLVMDFVDGIPILNLGDEIAKRGINPGGKVAAAAKQNILKSLMLVYGQMILKSGFFHAD 730
           +VLVM+++DGIPILNLGDEIAKRGINPGGK+AAAAKQ IL+SL + YGQMILKSGFFHAD
Sbjct: 248 RVLVMEYIDGIPILNLGDEIAKRGINPGGKLAAAAKQKILESLTIAYGQMILKSGFFHAD 307

Query: 729 PHPGNILICKGSQVALLDYGQVKDLPDNLRLGFANMILAIADDDPTRASQSYRQLGIETL 550
           PHPGNILICKGS+ A   Y  V   PD LR+G+AN+ILAIAD+DP +AS+SYR+LGIETL
Sbjct: 308 PHPGNILICKGSE-ASGQYKLVLTSPDKLRIGYANLILAIADNDPVKASESYRELGIETL 366

Query: 549 SKCKDEQKEMLKLAQSMFDTKLPAGSKMLQPFSEDSSLKKIAVQSFPEELFCVLRTVHLL 370
           S CKDEQ E+ KLAQ+MFDTKLP G  MLQPF+EDSS+KK+ VQ+FPEELF +LRTVHLL
Sbjct: 367 SNCKDEQNELFKLAQTMFDTKLPPGVVMLQPFAEDSSIKKVGVQAFPEELFSILRTVHLL 426

Query: 369 RGLSVGMGINISCAEQWRSIAEEALHDAGRIEGKDLKGMVHKRGFVRRIF 220
           RGLSVG+GIN SCA+QWR IAEEAL  AGR++ KD+K    +  F RRIF
Sbjct: 427 RGLSVGLGINYSCADQWRPIAEEALVRAGRLKDKDVKSRARQSSFFRRIF 476



 Score =  277 bits (709), Expect(2) = e-167
 Identities = 134/171 (78%), Positives = 155/171 (90%)
 Frame = -1

Query: 1418 GFFLKVAQIIGKPDLAPPAWVRRLITLCDRAPATPFEVVQLVLERELGCSVGEVFERFDA 1239
            GFFLK+AQIIGKPDLAP AWVRRL+TLCDRAPATPF+ +Q VLE+ELG S+GE+FERFD 
Sbjct: 77   GFFLKIAQIIGKPDLAPAAWVRRLVTLCDRAPATPFDAIQPVLEKELGQSIGEIFERFDV 136

Query: 1238 EPLGSASIAQVHRARLKGAKGDVAVKVQHPGGQDLMMTDIHNLQAFALYLQKSDIKFDLF 1059
            +P+GSASIAQVHRARL+G K DV VKVQHPG QDLMMTDI NLQAFALY+QK+DIKFDL+
Sbjct: 137  DPIGSASIAQVHRARLRGDKNDVVVKVQHPGVQDLMMTDIRNLQAFALYMQKTDIKFDLY 196

Query: 1058 SVTQELIAQIGYEFDFLREAEAMERIQRFLCVHNKKPPVLVPSVVRNMVTR 906
            SVT+E+  QIGYEFDF+REA+AMERI+RFL  +NKK PVLVP V+R+MVTR
Sbjct: 197  SVTKEMEKQIGYEFDFIREADAMERIKRFLYENNKKRPVLVPRVIRDMVTR 247


>ref|XP_003525637.1| PREDICTED: uncharacterized aarF domain-containing protein kinase
           1-like isoform 1 [Glycine max]
          Length = 469

 Score =  341 bits (874), Expect(2) = e-167
 Identities = 166/212 (78%), Positives = 192/212 (90%)
 Frame = -3

Query: 909 QVLVMDFVDGIPILNLGDEIAKRGINPGGKVAAAAKQNILKSLMLVYGQMILKSGFFHAD 730
           +VLVM+++DGIPI++LGDEIAKRGINP GKVAAAAKQ IL+SL L YGQMILKSGFFHAD
Sbjct: 251 RVLVMEYIDGIPIMSLGDEIAKRGINPHGKVAAAAKQKILQSLTLAYGQMILKSGFFHAD 310

Query: 729 PHPGNILICKGSQVALLDYGQVKDLPDNLRLGFANMILAIADDDPTRASQSYRQLGIETL 550
           PHPGNILICKGS+VALLDYGQVKDLPD LRL +AN++LAIA+ DP RAS+SYR+LGIET 
Sbjct: 311 PHPGNILICKGSEVALLDYGQVKDLPDQLRLAYANLVLAIANGDPLRASESYRELGIETF 370

Query: 549 SKCKDEQKEMLKLAQSMFDTKLPAGSKMLQPFSEDSSLKKIAVQSFPEELFCVLRTVHLL 370
           SKC++E +E+ KLAQ+MFDTKLP G  MLQPFSE+SS+KK+AVQSFPEELF VLRTVHLL
Sbjct: 371 SKCENELQELFKLAQTMFDTKLPPGVVMLQPFSEESSIKKVAVQSFPEELFSVLRTVHLL 430

Query: 369 RGLSVGMGINISCAEQWRSIAEEALHDAGRIE 274
           RGLS+G+GIN SCAEQWR  AEEAL  AGR++
Sbjct: 431 RGLSIGLGINYSCAEQWRPFAEEALSRAGRLK 462



 Score =  274 bits (701), Expect(2) = e-167
 Identities = 135/171 (78%), Positives = 150/171 (87%)
 Frame = -1

Query: 1418 GFFLKVAQIIGKPDLAPPAWVRRLITLCDRAPATPFEVVQLVLERELGCSVGEVFERFDA 1239
            GFFLK+AQIIGKPDLAP AWV+RL+TLCDRAP TPF+VV+LVLE ELG  + +VFERFD 
Sbjct: 80   GFFLKIAQIIGKPDLAPAAWVKRLVTLCDRAPPTPFDVVKLVLENELGQGIDDVFERFDV 139

Query: 1238 EPLGSASIAQVHRARLKGAKGDVAVKVQHPGGQDLMMTDIHNLQAFALYLQKSDIKFDLF 1059
            EPLGSASIAQVHRARLKG  GDV VKVQHPG QDLMMTDIHNLQ FALY+QK+DIKFDL+
Sbjct: 140  EPLGSASIAQVHRARLKGDTGDVVVKVQHPGIQDLMMTDIHNLQVFALYMQKTDIKFDLY 199

Query: 1058 SVTQELIAQIGYEFDFLREAEAMERIQRFLCVHNKKPPVLVPSVVRNMVTR 906
            SVT+E+  QIGYEFDF REA AMERI++FL   NKK PVLVP V+RNMVTR
Sbjct: 200  SVTKEMEKQIGYEFDFTREANAMERIRKFLYESNKKTPVLVPRVIRNMVTR 250


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