BLASTX nr result

ID: Coptis23_contig00025543 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025543
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276651.1| PREDICTED: uncharacterized protein LOC100254...   157   9e-37
emb|CAN75939.1| hypothetical protein VITISV_040960 [Vitis vinifera]   157   9e-37
emb|CBI34723.3| unnamed protein product [Vitis vinifera]              153   2e-35
emb|CAK18867.1| putative calmodulin binding protein precursor [P...   137   1e-30
ref|XP_002303569.1| predicted protein [Populus trichocarpa] gi|2...   134   6e-30

>ref|XP_002276651.1| PREDICTED: uncharacterized protein LOC100254717 [Vitis vinifera]
          Length = 494

 Score =  157 bits (397), Expect = 9e-37
 Identities = 78/113 (69%), Positives = 92/113 (81%)
 Frame = +3

Query: 3   SSKRGPFTPTKSDCSRSFLSVYSDHPSYMANTESSKAKVRSQSAPKQRLEFEKSSSTKRN 182
           SS+RGPFTPTKSD SRS+LS YSDHP+YMA TESSKAKVRS SAPKQR ++E+SSSTKR 
Sbjct: 379 SSRRGPFTPTKSDGSRSYLSGYSDHPNYMAYTESSKAKVRSFSAPKQRPQYERSSSTKRY 438

Query: 183 NAYGLGDTRITAQRASTLETSFTTKAYPGSGRLDRLGMPIPHEAVSFNGVYRN 341
           + +G GD+R  AQR S +  +FT+KAYPGSGRLDRLGMPI  EA   +G + N
Sbjct: 439 SVHGFGDSRSNAQRVSAMHANFTSKAYPGSGRLDRLGMPIRSEAFGLSGGFSN 491


>emb|CAN75939.1| hypothetical protein VITISV_040960 [Vitis vinifera]
          Length = 530

 Score =  157 bits (397), Expect = 9e-37
 Identities = 78/113 (69%), Positives = 92/113 (81%)
 Frame = +3

Query: 3   SSKRGPFTPTKSDCSRSFLSVYSDHPSYMANTESSKAKVRSQSAPKQRLEFEKSSSTKRN 182
           SS+RGPFTPTKSD SRS+LS YSDHP+YMA TESSKAKVRS SAPKQR ++E+SSSTKR 
Sbjct: 415 SSRRGPFTPTKSDGSRSYLSGYSDHPNYMAYTESSKAKVRSFSAPKQRPQYERSSSTKRY 474

Query: 183 NAYGLGDTRITAQRASTLETSFTTKAYPGSGRLDRLGMPIPHEAVSFNGVYRN 341
           + +G GD+R  AQR S +  +FT+KAYPGSGRLDRLGMPI  EA   +G + N
Sbjct: 475 SVHGFGDSRSNAQRVSAMHANFTSKAYPGSGRLDRLGMPIRSEAFGLSGGFSN 527


>emb|CBI34723.3| unnamed protein product [Vitis vinifera]
          Length = 465

 Score =  153 bits (386), Expect = 2e-35
 Identities = 76/104 (73%), Positives = 88/104 (84%)
 Frame = +3

Query: 3   SSKRGPFTPTKSDCSRSFLSVYSDHPSYMANTESSKAKVRSQSAPKQRLEFEKSSSTKRN 182
           SS+RGPFTPTKSD SRS+LS YSDHP+YMA TESSKAKVRS SAPKQR ++E+SSSTKR 
Sbjct: 342 SSRRGPFTPTKSDGSRSYLSGYSDHPNYMAYTESSKAKVRSFSAPKQRPQYERSSSTKRY 401

Query: 183 NAYGLGDTRITAQRASTLETSFTTKAYPGSGRLDRLGMPIPHEA 314
           + +G GD+R  AQR S +  +FT+KAYPGSGRLDRLGMPI  EA
Sbjct: 402 SVHGFGDSRSNAQRVSAMHANFTSKAYPGSGRLDRLGMPIRSEA 445


>emb|CAK18867.1| putative calmodulin binding protein precursor [Phillyrea latifolia]
          Length = 227

 Score =  137 bits (344), Expect = 1e-30
 Identities = 74/116 (63%), Positives = 88/116 (75%), Gaps = 1/116 (0%)
 Frame = +3

Query: 3   SSKRGPFTPTKSDCSRSFLSVYSDHPSYMANTESSKAKVRSQSAPKQRLEFEKSSSTKRN 182
           SSKRGPFTPTKSD SRS LS YSDHP+YM+ TES+KAKVRS SAPKQR  +E+SSS KR 
Sbjct: 113 SSKRGPFTPTKSDGSRSCLSGYSDHPNYMSYTESAKAKVRSMSAPKQRPHYERSSSIKRY 172

Query: 183 NAYGLGDTRITAQRASTLETSFTTKAYPGSGRLDRLGMP-IPHEAVSFNGVYRNRY 347
           + +G  ++R  +Q+ S    SFT KAYPGSGRLDRLGMP I  +   F+G  R+RY
Sbjct: 173 SIHGYSESRTNSQKGS-FYASFTGKAYPGSGRLDRLGMPVIRADPSGFSGGLRHRY 227


>ref|XP_002303569.1| predicted protein [Populus trichocarpa] gi|222841001|gb|EEE78548.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score =  134 bits (338), Expect = 6e-30
 Identities = 68/101 (67%), Positives = 82/101 (81%), Gaps = 1/101 (0%)
 Frame = +3

Query: 3   SSKRGPFTPTKSDCSRSFLSVYSDHPSYMANTESSKAKVRSQSAPKQRLEFEKSSSTKRN 182
           S KR PFTP++S  SRSF+S YSD+P+YM NTESS+AKVRS SAPKQR ++E+SSSTKR 
Sbjct: 198 SGKRSPFTPSRSGGSRSFMSGYSDYPNYMCNTESSRAKVRSLSAPKQRPQYERSSSTKRY 257

Query: 183 NAYGLGDTR-ITAQRASTLETSFTTKAYPGSGRLDRLGMPI 302
           +  G G+ R  +AQ AS L  SFT+KAYPGSGRLDRLGMP+
Sbjct: 258 SVLGFGEQRSSSAQSASALRASFTSKAYPGSGRLDRLGMPV 298


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