BLASTX nr result

ID: Coptis23_contig00025540 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025540
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633767.1| PREDICTED: fidgetin-like protein 1-like [Vit...   149   2e-34
emb|CBI21358.3| unnamed protein product [Vitis vinifera]              149   2e-34
ref|XP_002298621.1| predicted protein [Populus trichocarpa] gi|2...   137   7e-31
ref|XP_003524613.1| PREDICTED: fidgetin-like protein 1-like [Gly...   125   5e-27
ref|XP_002509525.1| ATP binding protein, putative [Ricinus commu...   124   1e-26

>ref|XP_003633767.1| PREDICTED: fidgetin-like protein 1-like [Vitis vinifera]
          Length = 668

 Score =  149 bits (377), Expect = 2e-34
 Identities = 82/151 (54%), Positives = 96/151 (63%), Gaps = 2/151 (1%)
 Frame = +1

Query: 4   SSEDGAIGNTQTDNQNLHKNQGILASVQIEDEERHQENSLATKRAHLVISSPKNENMKSP 183
           SSED  I        +  K QG  A +++E+EER   N L TKR H+ ISSP N+  KSP
Sbjct: 190 SSEDCVIVEKAHSYHSHPKGQGASAFLKVEEEERAHGNGLGTKRGHMEISSPGNDIAKSP 249

Query: 184 SCIEE--NDASGNGFVTARTKLEMDARQRHGLAXXXXXXXXXQNENNINSRSYGIRSGGF 357
           S  EE  ND  G GFVTAR KLEMDARQR G A         Q++NN  SR YG +S GF
Sbjct: 250 SSNEETQNDGFGKGFVTARAKLEMDARQRRGSAGSPSASVSPQSDNNFTSRGYGAKSYGF 309

Query: 358 PRRGIRNNFVPPIRSSGSNTGHTTSRISGKG 450
           PRRGIR NFVPPIRS+G N  + TS+I+GKG
Sbjct: 310 PRRGIRGNFVPPIRSNGGNASNMTSQIAGKG 340


>emb|CBI21358.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  149 bits (377), Expect = 2e-34
 Identities = 82/151 (54%), Positives = 96/151 (63%), Gaps = 2/151 (1%)
 Frame = +1

Query: 4   SSEDGAIGNTQTDNQNLHKNQGILASVQIEDEERHQENSLATKRAHLVISSPKNENMKSP 183
           SSED  I        +  K QG  A +++E+EER   N L TKR H+ ISSP N+  KSP
Sbjct: 175 SSEDCVIVEKAHSYHSHPKGQGASAFLKVEEEERAHGNGLGTKRGHMEISSPGNDIAKSP 234

Query: 184 SCIEE--NDASGNGFVTARTKLEMDARQRHGLAXXXXXXXXXQNENNINSRSYGIRSGGF 357
           S  EE  ND  G GFVTAR KLEMDARQR G A         Q++NN  SR YG +S GF
Sbjct: 235 SSNEETQNDGFGKGFVTARAKLEMDARQRRGSAGSPSASVSPQSDNNFTSRGYGAKSYGF 294

Query: 358 PRRGIRNNFVPPIRSSGSNTGHTTSRISGKG 450
           PRRGIR NFVPPIRS+G N  + TS+I+GKG
Sbjct: 295 PRRGIRGNFVPPIRSNGGNASNMTSQIAGKG 325


>ref|XP_002298621.1| predicted protein [Populus trichocarpa] gi|222845879|gb|EEE83426.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score =  137 bits (346), Expect = 7e-31
 Identities = 70/149 (46%), Positives = 101/149 (67%), Gaps = 2/149 (1%)
 Frame = +1

Query: 7   SEDGAIGNTQTDNQNLHKNQGILASVQIEDEERHQENSLATKRAHLVISSPKNENMKSPS 186
           SED  I      + N  K   + + +++++EER   N++ +KR+H+ ISSP+N++  SP+
Sbjct: 202 SEDHMIIEKPHSHNNHPKGYSLSSFIKLQEEERGYGNAVGSKRSHVEISSPRNDSANSPT 261

Query: 187 CIEEN--DASGNGFVTARTKLEMDARQRHGLAXXXXXXXXXQNENNINSRSYGIRSGGFP 360
             EEN  D SGNGFVTAR KLEMDA+Q+HGLA         Q+++   +R YG RS GF 
Sbjct: 262 NNEENNTDGSGNGFVTARAKLEMDAKQKHGLAGSPSTSVSPQSDST--NRGYGARSYGFS 319

Query: 361 RRGIRNNFVPPIRSSGSNTGHTTSRISGK 447
           RRG+R NF+PPI+S+G NTG+ T+R++GK
Sbjct: 320 RRGVRGNFIPPIKSNGGNTGNVTTRVAGK 348


>ref|XP_003524613.1| PREDICTED: fidgetin-like protein 1-like [Glycine max]
          Length = 659

 Score =  125 bits (313), Expect = 5e-27
 Identities = 69/150 (46%), Positives = 96/150 (64%), Gaps = 2/150 (1%)
 Frame = +1

Query: 4   SSEDGAIGNTQTDNQNLHKNQGILASVQIEDEERHQENSLATKRAHLVISSPKNENMKSP 183
           SSED    +    + +  K  G  + +Q+E EER   N+ +TKR H+  +SP+   +KSP
Sbjct: 181 SSEDCMSLDRPQSHASHTKGPGFSSILQVEGEERAFGNTFSTKRVHMENNSPRVGFVKSP 240

Query: 184 SCIEE--NDASGNGFVTARTKLEMDARQRHGLAXXXXXXXXXQNENNINSRSYGIRSGGF 357
           S  E+   DA GNGFVTAR KLEM+A+Q+ G+          Q +NN  +R YG RS G 
Sbjct: 241 SSKEDVNPDACGNGFVTARAKLEMEAKQKRGVGGSPSASVSPQCDNNSANRLYGGRSYGV 300

Query: 358 PRRGIRNNFVPPIRSSGSNTGHTTSRISGK 447
           PRRG+R NFVPPI+S+G+N G+T++RI+GK
Sbjct: 301 PRRGVRGNFVPPIKSNGNNAGNTSTRIAGK 330


>ref|XP_002509525.1| ATP binding protein, putative [Ricinus communis]
           gi|223549424|gb|EEF50912.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 660

 Score =  124 bits (310), Expect = 1e-26
 Identities = 67/133 (50%), Positives = 90/133 (67%), Gaps = 2/133 (1%)
 Frame = +1

Query: 58  KNQGILASVQIEDEERHQENSLATKRAHLVISSPKNENMKSPSCIEE--NDASGNGFVTA 231
           KN G+   ++ E+EER   ++L +KR+H  I SPK++  KSP+  EE   D SGNGFVTA
Sbjct: 202 KNHGLSTYMKNEEEERGFGSTLGSKRSHEEIRSPKSDIAKSPTNNEEANTDVSGNGFVTA 261

Query: 232 RTKLEMDARQRHGLAXXXXXXXXXQNENNINSRSYGIRSGGFPRRGIRNNFVPPIRSSGS 411
           R KLEMDARQ+ GL          Q +++  +R+YG RS GF RRGIR NFVPPI+S+G 
Sbjct: 262 RAKLEMDARQKRGLMGSPSASVSPQGDSS--NRNYGARSYGFSRRGIRGNFVPPIKSNGG 319

Query: 412 NTGHTTSRISGKG 450
           +T + T+R+ GKG
Sbjct: 320 STANMTARVGGKG 332


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