BLASTX nr result
ID: Coptis23_contig00025538
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00025538
(714 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002315119.1| dicer-like protein [Populus trichocarpa] gi|... 189 3e-58
ref|XP_002514810.1| ATP binding protein, putative [Ricinus commu... 191 2e-57
ref|XP_002312197.1| dicer-like protein [Populus trichocarpa] gi|... 184 6e-57
ref|XP_003535104.1| PREDICTED: endoribonuclease Dicer homolog 2-... 161 5e-49
ref|XP_003534774.1| PREDICTED: endoribonuclease Dicer homolog 2-... 161 2e-48
>ref|XP_002315119.1| dicer-like protein [Populus trichocarpa] gi|222864159|gb|EEF01290.1|
dicer-like protein [Populus trichocarpa]
Length = 1408
Score = 189 bits (481), Expect(2) = 3e-58
Identities = 90/146 (61%), Positives = 116/146 (79%)
Frame = -3
Query: 712 QTLLRGRHVFTVQNCLRRQSNPKEKESTAAYVELPPELCKIIMSCISLGTLKSYSLVPSI 533
+ LL GRH+F V N L R KEKES A+V+LPPELC II+S +S+ TL SY+ +PSI
Sbjct: 894 EPLLEGRHIFPVHNFLNRCRTKKEKESKNAHVDLPPELCDIILSPVSISTLYSYTFIPSI 953
Query: 532 MHRIESIVLALHLKKLQTGHLISNIQIPTMKILEAITTKKCQEEFSLESLETLGDSFLKY 353
MHR+ES+++A++LKK+ + H + N+ IP MK+LEAITTKKCQE+F LESLETLGDSFLKY
Sbjct: 954 MHRLESLLIAVNLKKMHSDHCMQNVDIPAMKVLEAITTKKCQEKFHLESLETLGDSFLKY 1013
Query: 352 AVGQQLFKRNKNHHEGLLSGHRERMV 275
A QQLFK +NHHEGLLS +E+++
Sbjct: 1014 AASQQLFKLYQNHHEGLLSMKKEKII 1039
Score = 62.0 bits (149), Expect(2) = 3e-58
Identities = 32/61 (52%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Frame = -2
Query: 182 PGD-LGLSGLVEASFSTSGQLYVMGSRHMKTKVIADVVEGLIGAYLTAGGEPAALHFLDW 6
PGD G L E S ++YV G R +K+K +ADVVE LIGAYL+ GGE AL F+DW
Sbjct: 1070 PGDKCGSDLLSEEPLSECRKIYVRGRRKVKSKTVADVVEALIGAYLSTGGEVLALFFMDW 1129
Query: 5 L 3
+
Sbjct: 1130 I 1130
>ref|XP_002514810.1| ATP binding protein, putative [Ricinus communis]
gi|223545861|gb|EEF47364.1| ATP binding protein, putative
[Ricinus communis]
Length = 1388
Score = 191 bits (485), Expect(2) = 2e-57
Identities = 93/146 (63%), Positives = 117/146 (80%)
Frame = -3
Query: 712 QTLLRGRHVFTVQNCLRRQSNPKEKESTAAYVELPPELCKIIMSCISLGTLKSYSLVPSI 533
Q LLRGRH+F +QN L R KEK+S AYVELPPELC I MS IS+ + S++ VPSI
Sbjct: 882 QLLLRGRHIFPLQNYLNRCRQQKEKDSQNAYVELPPELCHIFMSPISISSFYSFTFVPSI 941
Query: 532 MHRIESIVLALHLKKLQTGHLISNIQIPTMKILEAITTKKCQEEFSLESLETLGDSFLKY 353
MHR+ES+++A +LKKL H + ++ IPT+K+LEAITTKKCQE+F LESLETLGDSFLKY
Sbjct: 942 MHRLESLLIASNLKKLHLDHCMQSVAIPTIKVLEAITTKKCQEKFHLESLETLGDSFLKY 1001
Query: 352 AVGQQLFKRNKNHHEGLLSGHRERMV 275
AVGQQLFK +NHHEGLLS +++++
Sbjct: 1002 AVGQQLFKTYQNHHEGLLSIKKDKLI 1027
Score = 58.2 bits (139), Expect(2) = 2e-57
Identities = 29/56 (51%), Positives = 36/56 (64%)
Frame = -2
Query: 170 GLSGLVEASFSTSGQLYVMGSRHMKTKVIADVVEGLIGAYLTAGGEPAALHFLDWL 3
G L E S ++Y+ R +K K+IADVVE LIGAYL+ GGE A L FLDW+
Sbjct: 1063 GCYSLSEEILSNGRKMYIKRRRKLKEKMIADVVEALIGAYLSTGGEIAGLLFLDWI 1118
>ref|XP_002312197.1| dicer-like protein [Populus trichocarpa] gi|222852017|gb|EEE89564.1|
dicer-like protein [Populus trichocarpa]
Length = 1468
Score = 184 bits (466), Expect(2) = 6e-57
Identities = 86/146 (58%), Positives = 116/146 (79%)
Frame = -3
Query: 712 QTLLRGRHVFTVQNCLRRQSNPKEKESTAAYVELPPELCKIIMSCISLGTLKSYSLVPSI 533
+ LL+G+H+F V N L R KEK S +VELPPELC+II+S IS+ TL SY+ +PSI
Sbjct: 955 EPLLKGKHIFPVHNLLNRCRKQKEKASKNTHVELPPELCEIILSPISISTLYSYTFIPSI 1014
Query: 532 MHRIESIVLALHLKKLQTGHLISNIQIPTMKILEAITTKKCQEEFSLESLETLGDSFLKY 353
MHR+ES+++A++LKK+ + H + ++ IP+MK+LEAITT KCQE F+LESLETLGDSFLKY
Sbjct: 1015 MHRLESLLIAVNLKKMHSDHYLQHVNIPSMKVLEAITTNKCQENFNLESLETLGDSFLKY 1074
Query: 352 AVGQQLFKRNKNHHEGLLSGHRERMV 275
A QQLFK +NHHEGLLS +++++
Sbjct: 1075 AASQQLFKIYQNHHEGLLSFKKDKII 1100
Score = 63.5 bits (153), Expect(2) = 6e-57
Identities = 31/59 (52%), Positives = 39/59 (66%)
Frame = -2
Query: 179 GDLGLSGLVEASFSTSGQLYVMGSRHMKTKVIADVVEGLIGAYLTAGGEPAALHFLDWL 3
G LG L E S ++Y+ G R +K+K IADVVE LIGAYL+ GGE AL F+DW+
Sbjct: 1133 GKLGSDFLSEEPLSKGRKIYIRGRRKVKSKTIADVVEALIGAYLSTGGEVTALLFMDWI 1191
>ref|XP_003535104.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
Length = 1414
Score = 161 bits (407), Expect(2) = 5e-49
Identities = 83/146 (56%), Positives = 104/146 (71%)
Frame = -3
Query: 712 QTLLRGRHVFTVQNCLRRQSNPKEKESTAAYVELPPELCKIIMSCISLGTLKSYSLVPSI 533
Q LL+ RH+F V+N + KE E + A+VELPPELC I+M IS + SYS +PSI
Sbjct: 886 QRLLKARHIFQVKNHCHGRKQGKEGEVSKAFVELPPELCSIVMMPISDSLIYSYSFIPSI 945
Query: 532 MHRIESIVLALHLKKLQTGHLISNIQIPTMKILEAITTKKCQEEFSLESLETLGDSFLKY 353
MHR ES++ A +LKK+ H N +I T+K+LEAITTK+C+E F ESLETLGDSFLKY
Sbjct: 946 MHRFESLLGAFNLKKMHLDHCARN-EIQTIKVLEAITTKRCKEAFHYESLETLGDSFLKY 1004
Query: 352 AVGQQLFKRNKNHHEGLLSGHRERMV 275
A QQLFK NHHEGLLS RE+++
Sbjct: 1005 AASQQLFKTYHNHHEGLLSLKREKII 1030
Score = 59.7 bits (143), Expect(2) = 5e-49
Identities = 28/60 (46%), Positives = 40/60 (66%)
Frame = -2
Query: 182 PGDLGLSGLVEASFSTSGQLYVMGSRHMKTKVIADVVEGLIGAYLTAGGEPAALHFLDWL 3
PGD S ++ + +YV G R ++ K++ADVVE LIGA+L+ GGE AAL F+DW+
Sbjct: 1061 PGDKPRSFKLKELVAKGKTIYVSGKRKLRQKIVADVVEALIGAFLSTGGEKAALLFMDWV 1120
>ref|XP_003534774.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
Length = 1421
Score = 161 bits (408), Expect(2) = 2e-48
Identities = 82/146 (56%), Positives = 105/146 (71%)
Frame = -3
Query: 712 QTLLRGRHVFTVQNCLRRQSNPKEKESTAAYVELPPELCKIIMSCISLGTLKSYSLVPSI 533
Q LL+ RH F V+N Q K+ E++ A+VELPPELC I+MS I + ++S +PSI
Sbjct: 919 QWLLKARHHFKVKNYCHGQKQGKDGEASKAFVELPPELCSIVMSPIKDSIIYTFSFIPSI 978
Query: 532 MHRIESIVLALHLKKLQTGHLISNIQIPTMKILEAITTKKCQEEFSLESLETLGDSFLKY 353
MHR+ES++ A +LKK+ H N +I T+K+LEAITTK+C E F ESLETLGDSFLKY
Sbjct: 979 MHRLESLLGAFNLKKMHLDHCTQN-EIQTIKVLEAITTKRCNEAFHYESLETLGDSFLKY 1037
Query: 352 AVGQQLFKRNKNHHEGLLSGHRERMV 275
A QQLFK KNHHEGLLS RE+++
Sbjct: 1038 AASQQLFKTYKNHHEGLLSVKREKII 1063
Score = 57.4 bits (137), Expect(2) = 2e-48
Identities = 29/60 (48%), Positives = 39/60 (65%)
Frame = -2
Query: 182 PGDLGLSGLVEASFSTSGQLYVMGSRHMKTKVIADVVEGLIGAYLTAGGEPAALHFLDWL 3
PGD S +E ++YV G R + K+IADVVE LIGA+L+ GGE +AL F+DW+
Sbjct: 1094 PGDKPESLKLEELVIKGKKIYVHGKRKLNRKIIADVVEALIGAFLSTGGEISALLFMDWV 1153