BLASTX nr result

ID: Coptis23_contig00025532 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025532
         (792 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264062.1| PREDICTED: ATPase WRNIP1-like [Vitis vinifera]    314   1e-83
ref|XP_003618090.1| ATPase WRNIP1 [Medicago truncatula] gi|35551...   306   4e-81
ref|XP_004147772.1| PREDICTED: ATPase WRNIP1-like [Cucumis sativus]   300   3e-79
ref|XP_003545063.1| PREDICTED: ATPase WRNIP1-like [Glycine max]       297   2e-78
ref|XP_002316599.1| predicted protein [Populus trichocarpa] gi|2...   296   3e-78

>ref|XP_002264062.1| PREDICTED: ATPase WRNIP1-like [Vitis vinifera]
          Length = 534

 Score =  314 bits (805), Expect = 1e-83
 Identities = 174/281 (61%), Positives = 207/281 (73%), Gaps = 19/281 (6%)
 Frame = -3

Query: 790 LGFSQELATQALAATGGNSTIKATEWILDQKXXXXXXXXXXS--------FQPKLNRFFS 635
           +GF  +LA+QALAATGG S +KATEWIL +                    FQPKL+RFF 
Sbjct: 9   MGFPDDLASQALAATGGKSILKATEWILGRNKSDSQTPDENPNSSPSPSPFQPKLDRFF- 67

Query: 634 PQTQQKPLSPTINTNQELKLNLFPNP--KRTKLQ-QNPPHREPLSERMRPRNADEIIGQD 464
              Q KP +P     Q       P+P  KR +L+ +N PH +PLSERMRPR  D+++GQD
Sbjct: 68  -HFQSKPSNPPQIQKQHCDTPSLPSPPSKRLRLEAENSPH-QPLSERMRPRTVDDVVGQD 125

Query: 463 HILGKNAILRSSLDCNRLPSIVLWGPPGTGKTSIAKAIVSSST----YKFVSLSAVTAGV 296
           H+L   ++LRS++D NRLPSI+LWGPPGTGKTSIAKAIV+SS+    Y+FVSLSAVTAGV
Sbjct: 126 HLLSHKSLLRSAIDSNRLPSIILWGPPGTGKTSIAKAIVNSSSQPSSYRFVSLSAVTAGV 185

Query: 295 KDVRDVVEEAKK----KINNNRQTVLFVDEVHRFNKSQQDSFLPVIEDGTIVFIGATTEN 128
           KDVRDVVEEA+K    K  N+++T+LFVDEVHRFNKSQQDSFLPVIEDG+IVFIGATTEN
Sbjct: 186 KDVRDVVEEARKIKVSKNMNSKRTLLFVDEVHRFNKSQQDSFLPVIEDGSIVFIGATTEN 245

Query: 127 PSFHLITPLLSRCRVLKLNSLEPEIIGRLLRRAVDDGGKGL 5
           PSFHLITPLLSRCRVL LN L+P  +  LL RAV D G+GL
Sbjct: 246 PSFHLITPLLSRCRVLTLNPLQPSHVASLLNRAVADTGRGL 286


>ref|XP_003618090.1| ATPase WRNIP1 [Medicago truncatula] gi|355519425|gb|AET01049.1|
           ATPase WRNIP1 [Medicago truncatula]
          Length = 551

 Score =  306 bits (783), Expect = 4e-81
 Identities = 171/289 (59%), Positives = 206/289 (71%), Gaps = 27/289 (9%)
 Frame = -3

Query: 790 LGFSQELATQALAATGGNSTIKATEWILDQKXXXXXXXXXXS-----FQPKLNRFFSPQT 626
           +GF  ELA QALAATGG ST+KATEWIL  K          S     FQPKL+RFF  QT
Sbjct: 9   MGFPDELAAQALAATGGKSTVKATEWILTHKPPNSTIHTPSSSPSSAFQPKLDRFF--QT 66

Query: 625 QQKPLSPT--------------INTNQELKLNLFPNPKRTKLQQNPPHREPLSERMRPRN 488
            Q+P+                 ++  Q+ K + F  P  T ++Q P   EPL ER+RPR 
Sbjct: 67  PQQPIQAEQQQQQTEEPNKRTKLSPTQQNKPSFFFKP--TSMKQQPQTHEPLYERLRPRT 124

Query: 487 ADEIIGQDHILGKNAILRSSLDCNRLPSIVLWGPPGTGKTSIAKAIVSSST-------YK 329
            DE++GQDH+L  N+ILRSS+   RLPSI+LWGPPGTGKT+IAKAIV+SS+       Y+
Sbjct: 125 LDEVVGQDHLLSTNSILRSSIQRKRLPSILLWGPPGTGKTTIAKAIVNSSSTTKDSPLYR 184

Query: 328 FVSLSAVTAGVKDVRDVVEEAKK-KINNNRQTVLFVDEVHRFNKSQQDSFLPVIEDGTIV 152
           FVSLSAVT+GVKDVR+ V+EA+K ++  N+ TVLFVDEVHRFNKSQQDSFLPVIEDG+IV
Sbjct: 185 FVSLSAVTSGVKDVREAVDEARKVRVKTNQTTVLFVDEVHRFNKSQQDSFLPVIEDGSIV 244

Query: 151 FIGATTENPSFHLITPLLSRCRVLKLNSLEPEIIGRLLRRAVDDGGKGL 5
           F+GATTENPSFHLITPLLSRCRVL LN L+P  +  LL+RAV+D  KGL
Sbjct: 245 FVGATTENPSFHLITPLLSRCRVLTLNPLQPHHLILLLKRAVNDTEKGL 293


>ref|XP_004147772.1| PREDICTED: ATPase WRNIP1-like [Cucumis sativus]
          Length = 513

 Score =  300 bits (767), Expect = 3e-79
 Identities = 167/269 (62%), Positives = 196/269 (72%), Gaps = 7/269 (2%)
 Frame = -3

Query: 790 LGFSQELATQALAATGGNSTIKATEWILDQKXXXXXXXXXXSFQPKLNRFFSPQTQQKPL 611
           +GF  ELA QALAATGG ST+KATEWIL+ K                    S     KP 
Sbjct: 7   MGFPDELAAQALAATGGKSTLKATEWILNHK--------------------SSSPSPKPN 46

Query: 610 SP-TINTNQELKLNLFPNPKRTKLQQNPPHREPLSERMRPRNADEIIGQDHILGKNAILR 434
            P + N N + KL+ F +      Q  PP     SERMRPR  D+++GQDH+L KN+ILR
Sbjct: 47  LPISSNPNLQPKLDRFFH-----FQPRPPPPSA-SERMRPRTIDDVVGQDHLLAKNSILR 100

Query: 433 SSLDCNRLPSIVLWGPPGTGKTSIAKAIVSSST-----YKFVSLSAVTAGVKDVRDVVEE 269
           SSLDCNRLPSIVLWGPPGTGKTSIAKAIV S++     ++FVSLSAVT+GVKDVRD VEE
Sbjct: 101 SSLDCNRLPSIVLWGPPGTGKTSIAKAIVGSTSSFSQSFRFVSLSAVTSGVKDVRDAVEE 160

Query: 268 AKK-KINNNRQTVLFVDEVHRFNKSQQDSFLPVIEDGTIVFIGATTENPSFHLITPLLSR 92
           A+K +I NN++TVLF+DEVHRFNKSQQDSFLPVIEDG+I+F+GATTENPSFHLITPLLSR
Sbjct: 161 ARKIRIKNNKRTVLFLDEVHRFNKSQQDSFLPVIEDGSIIFLGATTENPSFHLITPLLSR 220

Query: 91  CRVLKLNSLEPEIIGRLLRRAVDDGGKGL 5
            RVL LN L+P  +  +L+RAVDD  KGL
Sbjct: 221 SRVLTLNPLKPHHVTLILKRAVDDSDKGL 249


>ref|XP_003545063.1| PREDICTED: ATPase WRNIP1-like [Glycine max]
          Length = 533

 Score =  297 bits (761), Expect = 2e-78
 Identities = 165/276 (59%), Positives = 199/276 (72%), Gaps = 14/276 (5%)
 Frame = -3

Query: 790 LGFSQELATQALAATGGNSTIKATEWILDQKXXXXXXXXXXSFQPKLNRFFSPQTQQ--- 620
           +GF  ELA QALAATGG ST+KATEWIL  K           FQPKL+RFF  Q+Q+   
Sbjct: 7   MGFPDELAAQALAATGGKSTVKATEWILSHKPNSST------FQPKLDRFFHSQSQEHDE 60

Query: 619 -----KPL-SPTINTNQELKLNLFPNPKRTKLQQNPPHREPLSERMRPRNADEIIGQDHI 458
                KP  SP+ +  Q      F      K   N    EPL ER+RPR  D+++GQ+H+
Sbjct: 61  PSKRPKPSPSPSPSPAQPQHWPSFFFKIADKKHANTHIHEPLYERLRPRTLDDVVGQEHL 120

Query: 457 LGKNAILRSSLDCNRLPSIVLWGPPGTGKTSIAKAIVSSS----TYKFVSLSAVTAGVKD 290
           L  N++LRS++  NRLPSI+LWGPPGTGKT+IAKAIV+S+    +Y+FVSLSAVT+GVKD
Sbjct: 121 LAPNSLLRSAIQRNRLPSILLWGPPGTGKTTIAKAIVNSTPSTNSYRFVSLSAVTSGVKD 180

Query: 289 VRDVVEEAKK-KINNNRQTVLFVDEVHRFNKSQQDSFLPVIEDGTIVFIGATTENPSFHL 113
           VRD V+EA+K ++ +N+ TVLFVDEVHRFNKSQQDSFLPVIEDG+IVF+GATTENPSFHL
Sbjct: 181 VRDAVDEARKLRLKSNQTTVLFVDEVHRFNKSQQDSFLPVIEDGSIVFLGATTENPSFHL 240

Query: 112 ITPLLSRCRVLKLNSLEPEIIGRLLRRAVDDGGKGL 5
           ITPLLSRCRVL LN L+P  +  LL RAV    KGL
Sbjct: 241 ITPLLSRCRVLTLNPLQPHHLALLLNRAVTHTDKGL 276


>ref|XP_002316599.1| predicted protein [Populus trichocarpa] gi|222859664|gb|EEE97211.1|
           predicted protein [Populus trichocarpa]
          Length = 553

 Score =  296 bits (758), Expect = 3e-78
 Identities = 166/298 (55%), Positives = 205/298 (68%), Gaps = 36/298 (12%)
 Frame = -3

Query: 790 LGFSQELATQALAATGGNSTIKATEWILDQKXXXXXXXXXXSF---QPKLNRFF---SPQ 629
           +GF  ELA QALAATGG ST+KATEWIL Q                QPKL+RFF   S +
Sbjct: 7   MGFPSELAAQALAATGGKSTVKATEWILSQTSHPHPNNSPNGSSFQQPKLDRFFHFPSSK 66

Query: 628 TQQKPLSPTINTNQELKLNLFPNPKRTKLQ-QNPP----------------------HRE 518
            +Q+P SP+ +  Q       P P    L  Q PP                      + E
Sbjct: 67  PKQEPSSPSNSPTQTTTAPPPPPPHHQVLSAQTPPPSKRPKVFAPSPPSNPHNHTISNDE 126

Query: 517 PLSERMRPRNADEIIGQDHILGKNAILRSSLDCNRLPSIVLWGPPGTGKTSIAKAIVSS- 341
           PL+ERMRPR  D++IGQD +L +N++LRS++ C+R+PSI+LWGPPGTGKTSIA+AIV+S 
Sbjct: 127 PLAERMRPRTIDDVIGQDLLLSQNSLLRSAIRCSRIPSIILWGPPGTGKTSIARAIVTSA 186

Query: 340 -----STYKFVSLSAVTAGVKDVRDVVEEAKK-KINNNRQTVLFVDEVHRFNKSQQDSFL 179
                S+Y+FVSLSAVT GVKD RD  E+A+K K+ N+++TVLF+DEVHRFNKSQQDSFL
Sbjct: 187 NSQGSSSYRFVSLSAVTCGVKDARDAFEDARKFKLKNSKRTVLFLDEVHRFNKSQQDSFL 246

Query: 178 PVIEDGTIVFIGATTENPSFHLITPLLSRCRVLKLNSLEPEIIGRLLRRAVDDGGKGL 5
           PVIEDGTIVFIGATTENPSFHL+TPLLSRCRVL L+ L+P  +  +L+RAV+D  KGL
Sbjct: 247 PVIEDGTIVFIGATTENPSFHLVTPLLSRCRVLTLSPLKPHHVQTILKRAVNDPDKGL 304


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