BLASTX nr result

ID: Coptis23_contig00025527 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025527
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526576.1| Cell division control protein, putative [Ric...    97   1e-18
ref|XP_004161438.1| PREDICTED: ALA-interacting subunit 5-like is...    97   2e-18
ref|XP_004140727.1| PREDICTED: ALA-interacting subunit 5-like [C...    97   2e-18
ref|XP_002327453.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17
ref|XP_002265244.1| PREDICTED: ALA-interacting subunit 3 [Vitis ...    92   4e-17

>ref|XP_002526576.1| Cell division control protein, putative [Ricinus communis]
           gi|223534070|gb|EEF35788.1| Cell division control
           protein, putative [Ricinus communis]
          Length = 386

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 48/85 (56%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
 Frame = -3

Query: 252 AKRSSKKPKYSRFTQQELPACKPILTPGWXXXXXXXXXXXXXXXGLASLFASQQVVEIVE 73
           AKR+S+KPKYSRFTQQELPACKPILTPGW               GL +LFAS++VVEIV+
Sbjct: 18  AKRNSRKPKYSRFTQQELPACKPILTPGWVITAFVAVGIIFIPIGLTTLFASERVVEIVD 77

Query: 72  RYDSDCISSSFSDKE-DFIKRSDTN 1
           RYD DCI  ++ ++  ++I+ S+TN
Sbjct: 78  RYDKDCIPHNYQNESLEYIQSSNTN 102


>ref|XP_004161438.1| PREDICTED: ALA-interacting subunit 5-like isoform 1 [Cucumis
           sativus] gi|449501692|ref|XP_004161439.1| PREDICTED:
           ALA-interacting subunit 5-like isoform 2 [Cucumis
           sativus]
          Length = 337

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 51/88 (57%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
 Frame = -3

Query: 261 TDTAKRSSKKPKYSRFTQQELPACKPILTPGWXXXXXXXXXXXXXXXGLASLFASQQVVE 82
           + T  + SKKPKYSRFTQQELPACKPILTPGW               G+ASLFAS+QVVE
Sbjct: 21  SSTPPKKSKKPKYSRFTQQELPACKPILTPGWVITSFVAVGIIFIPIGIASLFASEQVVE 80

Query: 81  IVERYDSDCISSSF-SDKEDFIKRSDTN 1
           IV++YD DC+ S F  +   FIK S TN
Sbjct: 81  IVDQYDHDCLPSQFRGNPLTFIKDSKTN 108


>ref|XP_004140727.1| PREDICTED: ALA-interacting subunit 5-like [Cucumis sativus]
          Length = 356

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 51/88 (57%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
 Frame = -3

Query: 261 TDTAKRSSKKPKYSRFTQQELPACKPILTPGWXXXXXXXXXXXXXXXGLASLFASQQVVE 82
           + T  + SKKPKYSRFTQQELPACKPILTPGW               G+ASLFAS+QVVE
Sbjct: 21  SSTPPKKSKKPKYSRFTQQELPACKPILTPGWVITSFVAVGIIFIPIGIASLFASEQVVE 80

Query: 81  IVERYDSDCISSSF-SDKEDFIKRSDTN 1
           IV++YD DC+ S F  +   FIK S TN
Sbjct: 81  IVDQYDHDCLPSQFRGNPLTFIKDSKTN 108


>ref|XP_002327453.1| predicted protein [Populus trichocarpa] gi|222836007|gb|EEE74428.1|
           predicted protein [Populus trichocarpa]
          Length = 353

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 47/92 (51%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
 Frame = -3

Query: 273 NDGPTDTAKRSSKKPKYSRFTQQELPACKPILTPGWXXXXXXXXXXXXXXXGLASLFASQ 94
           +D P   + + +KKP YSRFTQQELPACKPILTPGW               GLASL+AS+
Sbjct: 14  DDSPAAVSAKKNKKPNYSRFTQQELPACKPILTPGWVITSFIVVGVVFIPIGLASLYASE 73

Query: 93  QVVEIVERYDSDCISSSFSDKE-DFIKRSDTN 1
            VVEIVERYD DCI   + +    +I+ S+ N
Sbjct: 74  HVVEIVERYDKDCIPPDYRNNSLHYIQTSEIN 105


>ref|XP_002265244.1| PREDICTED: ALA-interacting subunit 3 [Vitis vinifera]
           gi|297736110|emb|CBI24148.3| unnamed protein product
           [Vitis vinifera]
          Length = 349

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 48/97 (49%), Positives = 66/97 (68%), Gaps = 3/97 (3%)
 Frame = -3

Query: 294 MPPTPKGNDGPTDTA--KRSSKKPKYSRFTQQELPACKPILTPGWXXXXXXXXXXXXXXX 121
           +P +  G  G  D++  +R+SK+PKYSRFTQQELPACKPILTP W               
Sbjct: 5   VPSSSSGAAGSADSSAPRRNSKRPKYSRFTQQELPACKPILTPRWVISAFMLVGIIFIPI 64

Query: 120 GLASLFASQQVVEIVERYDSDCISSSF-SDKEDFIKR 13
           G+A+LFAS+ VVEIV+RY++DCI   F +DK ++I++
Sbjct: 65  GVAALFASRDVVEIVDRYETDCIPEEFRNDKVNYIQK 101


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