BLASTX nr result

ID: Coptis23_contig00025505 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025505
         (517 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531827.1| PREDICTED: 50S ribosomal protein L18-like [G...   210   1e-52
dbj|BAD07676.1| unknown protein [Oryza sativa Japonica Group] gi...   209   2e-52
ref|XP_004150421.1| PREDICTED: 50S ribosomal protein L18-like [C...   209   2e-52
emb|CBI38108.3| unnamed protein product [Vitis vinifera]              209   2e-52
ref|XP_002263231.1| PREDICTED: 50S ribosomal protein L18 [Vitis ...   209   2e-52

>ref|XP_003531827.1| PREDICTED: 50S ribosomal protein L18-like [Glycine max]
          Length = 197

 Score =  210 bits (534), Expect = 1e-52
 Identities = 99/117 (84%), Positives = 113/117 (96%)
 Frame = -1

Query: 517 EAAKKPNRKSWKQRTDMYMRPFLLNVFFSKRFIHAKVMHRGTCKVVSVASTNSRDLRNTL 338
           EAAKKPNRKSWKQRTDMYMRPFLLNVFFSKRFIHAKV+HRGT KV+ VA+TN++DLRN+L
Sbjct: 81  EAAKKPNRKSWKQRTDMYMRPFLLNVFFSKRFIHAKVVHRGTSKVICVATTNAKDLRNSL 140

Query: 337 PSLIDNNACRTIGTLIAERSMEADVFAMSYEPKKDERIEGKLGIILDTIKENGIIFV 167
           PSLID+NACR +G LIAERSMEADV+A++YEP+KDERIEG+LGI+LDTIKENGIIFV
Sbjct: 141 PSLIDHNACRVVGNLIAERSMEADVYAVAYEPRKDERIEGRLGIVLDTIKENGIIFV 197


>dbj|BAD07676.1| unknown protein [Oryza sativa Japonica Group]
           gi|125540732|gb|EAY87127.1| hypothetical protein
           OsI_08528 [Oryza sativa Indica Group]
           gi|125583307|gb|EAZ24238.1| hypothetical protein
           OsJ_07988 [Oryza sativa Japonica Group]
           gi|215704232|dbj|BAG93072.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 181

 Score =  209 bits (532), Expect = 2e-52
 Identities = 99/117 (84%), Positives = 113/117 (96%)
 Frame = -1

Query: 517 EAAKKPNRKSWKQRTDMYMRPFLLNVFFSKRFIHAKVMHRGTCKVVSVASTNSRDLRNTL 338
           EA ++PNRKSWKQRTDMYMRPFLLNVFFSKRF+HAKV+HRGT KV+SVASTN++DLR TL
Sbjct: 65  EAEERPNRKSWKQRTDMYMRPFLLNVFFSKRFVHAKVVHRGTSKVISVASTNAKDLRTTL 124

Query: 337 PSLIDNNACRTIGTLIAERSMEADVFAMSYEPKKDERIEGKLGIILDTIKENGIIFV 167
           PSL+D+NACRTIG LIAERSM+ADVFAMSYEPKK+ERIEGKLGI++DTIKE+GIIFV
Sbjct: 125 PSLVDDNACRTIGRLIAERSMDADVFAMSYEPKKNERIEGKLGIVIDTIKEHGIIFV 181


>ref|XP_004150421.1| PREDICTED: 50S ribosomal protein L18-like [Cucumis sativus]
          Length = 190

 Score =  209 bits (531), Expect = 2e-52
 Identities = 98/118 (83%), Positives = 113/118 (95%)
 Frame = -1

Query: 517 EAAKKPNRKSWKQRTDMYMRPFLLNVFFSKRFIHAKVMHRGTCKVVSVASTNSRDLRNTL 338
           EAAK+PN+KSWKQRTDMYMRPFLLNVFFSK+FIHAKVMHRGT KV+SVA+TN++DLRN+L
Sbjct: 73  EAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTSKVISVATTNAKDLRNSL 132

Query: 337 PSLIDNNACRTIGTLIAERSMEADVFAMSYEPKKDERIEGKLGIILDTIKENGIIFVP 164
           PSL D+NACR IG LIAERS EADV+A+SYEP+KDERIEGKLGI++DTIKENGI+FVP
Sbjct: 133 PSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDERIEGKLGIVIDTIKENGIMFVP 190


>emb|CBI38108.3| unnamed protein product [Vitis vinifera]
          Length = 197

 Score =  209 bits (531), Expect = 2e-52
 Identities = 102/117 (87%), Positives = 111/117 (94%)
 Frame = -1

Query: 517 EAAKKPNRKSWKQRTDMYMRPFLLNVFFSKRFIHAKVMHRGTCKVVSVASTNSRDLRNTL 338
           EAAK+P+RKSWKQ+TDMYMRPFLLNVFFSKRFIHAKVMHR T KV+SVA+TNS+DLRNTL
Sbjct: 81  EAAKRPSRKSWKQKTDMYMRPFLLNVFFSKRFIHAKVMHRPTSKVISVATTNSKDLRNTL 140

Query: 337 PSLIDNNACRTIGTLIAERSMEADVFAMSYEPKKDERIEGKLGIILDTIKENGIIFV 167
            SL D+NACR IG LIAERSMEADVFAMSYEP+KDERIEGKLGI+LDTIKENGIIFV
Sbjct: 141 SSLTDHNACRVIGKLIAERSMEADVFAMSYEPRKDERIEGKLGIVLDTIKENGIIFV 197


>ref|XP_002263231.1| PREDICTED: 50S ribosomal protein L18 [Vitis vinifera]
          Length = 183

 Score =  209 bits (531), Expect = 2e-52
 Identities = 102/117 (87%), Positives = 111/117 (94%)
 Frame = -1

Query: 517 EAAKKPNRKSWKQRTDMYMRPFLLNVFFSKRFIHAKVMHRGTCKVVSVASTNSRDLRNTL 338
           EAAK+P+RKSWKQ+TDMYMRPFLLNVFFSKRFIHAKVMHR T KV+SVA+TNS+DLRNTL
Sbjct: 67  EAAKRPSRKSWKQKTDMYMRPFLLNVFFSKRFIHAKVMHRPTSKVISVATTNSKDLRNTL 126

Query: 337 PSLIDNNACRTIGTLIAERSMEADVFAMSYEPKKDERIEGKLGIILDTIKENGIIFV 167
            SL D+NACR IG LIAERSMEADVFAMSYEP+KDERIEGKLGI+LDTIKENGIIFV
Sbjct: 127 SSLTDHNACRVIGKLIAERSMEADVFAMSYEPRKDERIEGKLGIVLDTIKENGIIFV 183


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