BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025503
         (866 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGE44298.1| whirly transcription factor domain containing pro...   231   2e-58
ref|XP_003574931.1| PREDICTED: uncharacterized protein LOC100825...   231   2e-58
ref|NP_001045956.1| Os02g0158400 [Oryza sativa Japonica Group] g...   225   9e-57
gb|AAG51881.1|AC016162_2 unknown protein; 79476-81015 [Arabidops...   222   7e-56
ref|NP_177282.2| protein WHIRLY 2 [Arabidopsis thaliana] gi|7516...   222   7e-56

>gb|AGE44298.1| whirly transcription factor domain containing protein [Musa AB
           Group]
          Length = 245

 Score =  231 bits (589), Expect = 2e-58
 Identities = 109/182 (59%), Positives = 142/182 (78%), Gaps = 4/182 (2%)
 Frame = -1

Query: 800 DYSIFKGKAALLTAPKIPTFNQINN---RIDKKGCIMLTFMPAVGERKYDYERRQVFALS 630
           +Y++FKGKAAL  +P +PTF ++++   R+ KKGC++LTF PA+G+RKYD++++Q FALS
Sbjct: 64  EYTVFKGKAALSVSPILPTFREVDSGVSRVHKKGCVILTFWPAIGQRKYDWQKKQAFALS 123

Query: 629 PTEVGSLISLESGKSCEFFHDPSMKSSNAGQVRKSLSVSPYGEDSGFFFNLSVVNNIQKT 450
           PTEVGSLI L   +SCEFFHDPSMKSS  GQV+KSLS+SP  + +G+  NLSVVNNIQKT
Sbjct: 124 PTEVGSLIGLGPAESCEFFHDPSMKSSLEGQVKKSLSISPLNDKAGYLLNLSVVNNIQKT 183

Query: 449 NERFSVPVSKAEFAVLRTAFSYILPHIMGWDQYTKPVQTSGELNSVR-LLEKRPSPNSEW 273
           NERFS+PVSKAEF  +RT FSY+LPHIMGW Q   P   S   ++ +  +E+RP P+ EW
Sbjct: 184 NERFSLPVSKAEFTAIRTVFSYVLPHIMGWSQAASPQPPSTATHTPKEQIEERPDPSLEW 243

Query: 272 DR 267
            R
Sbjct: 244 GR 245


>ref|XP_003574931.1| PREDICTED: uncharacterized protein LOC100825843 [Brachypodium
           distachyon]
          Length = 231

 Score =  231 bits (588), Expect = 2e-58
 Identities = 111/182 (60%), Positives = 142/182 (78%), Gaps = 3/182 (1%)
 Frame = -1

Query: 803 ADYSIFKGKAALLTAPKIPTFNQINN---RIDKKGCIMLTFMPAVGERKYDYERRQVFAL 633
           A Y++FKGKAAL  +P +P F +I +   R+ K G +MLTF PAVG+R+YDY ++Q+FAL
Sbjct: 50  ASYTVFKGKAALSISPILPNFTKIESGGSRVKKNGSVMLTFFPAVGQRQYDYSKKQLFAL 109

Query: 632 SPTEVGSLISLESGKSCEFFHDPSMKSSNAGQVRKSLSVSPYGEDSGFFFNLSVVNNIQK 453
           SPTEVGSLISL S +SCEFFHDPSMKSS+ GQV+KSLS++P G D+G+F N++V+NN+QK
Sbjct: 110 SPTEVGSLISLGSAESCEFFHDPSMKSSHEGQVKKSLSITPLGNDNGYFVNITVLNNVQK 169

Query: 452 TNERFSVPVSKAEFAVLRTAFSYILPHIMGWDQYTKPVQTSGELNSVRLLEKRPSPNSEW 273
           TNER SVPV+KAEFAV+RTA SY LPHIMGWDQ       S    + +   +RP P+SEW
Sbjct: 170 TNERLSVPVTKAEFAVMRTALSYALPHIMGWDQALTSHPQSPTAPASKPRVERPHPDSEW 229

Query: 272 DR 267
           +R
Sbjct: 230 ER 231


>ref|NP_001045956.1| Os02g0158400 [Oryza sativa Japonica Group]
           gi|50251252|dbj|BAD28032.1| putative Chain C, Structure
           Of The Plant Transcriptional Regulator Pbf-2 [Oryza
           sativa Japonica Group] gi|50252182|dbj|BAD28177.1|
           putative Chain C, Structure Of The Plant Transcriptional
           Regulator Pbf-2 [Oryza sativa Japonica Group]
           gi|113535487|dbj|BAF07870.1| Os02g0158400 [Oryza sativa
           Japonica Group] gi|215692593|dbj|BAG88013.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215704516|dbj|BAG94149.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215740785|dbj|BAG96941.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218190103|gb|EEC72530.1| hypothetical protein
           OsI_05924 [Oryza sativa Indica Group]
           gi|222622212|gb|EEE56344.1| hypothetical protein
           OsJ_05450 [Oryza sativa Japonica Group]
          Length = 228

 Score =  225 bits (574), Expect = 9e-57
 Identities = 110/182 (60%), Positives = 142/182 (78%), Gaps = 3/182 (1%)
 Frame = -1

Query: 803 ADYSIFKGKAALLTAPKIPTFNQINN---RIDKKGCIMLTFMPAVGERKYDYERRQVFAL 633
           A Y++FKGKAAL   P +P+F+++ +   R++K G +MLTF PAVG+RKYDY ++Q+FAL
Sbjct: 48  ASYTVFKGKAALSMQPILPSFSKLESGGSRVNKNGSVMLTFFPAVGQRKYDYSKKQLFAL 107

Query: 632 SPTEVGSLISLESGKSCEFFHDPSMKSSNAGQVRKSLSVSPYGEDSGFFFNLSVVNNIQK 453
           SPTEVGSLISL   +SCEFFHDPSMKSS+ GQV+KSLSV+P G DSG+F N++V+NN+QK
Sbjct: 108 SPTEVGSLISLGPAESCEFFHDPSMKSSHEGQVKKSLSVTPLGNDSGYFLNITVLNNLQK 167

Query: 452 TNERFSVPVSKAEFAVLRTAFSYILPHIMGWDQYTKPVQTSGELNSVRLLEKRPSPNSEW 273
           T ER S+P+SKAEF V+RTA S+ LPHI+GWDQ     Q S    S   +E RP P+SEW
Sbjct: 168 TTERLSLPISKAEFTVMRTALSFALPHILGWDQALTNHQPSPSPASKPRVE-RPHPDSEW 226

Query: 272 DR 267
           +R
Sbjct: 227 ER 228


>gb|AAG51881.1|AC016162_2 unknown protein; 79476-81015 [Arabidopsis thaliana]
          Length = 237

 Score =  222 bits (566), Expect = 7e-56
 Identities = 115/192 (59%), Positives = 144/192 (75%), Gaps = 4/192 (2%)
 Frame = -1

Query: 830 AGSRTGYVNADYSIFKGKAALLTAPKIPTFNQI---NNRIDKKGCIMLTFMPAVGERKYD 660
           A   +G + A YSIFKGKAAL   P +P+F +I   N RID++G +M+TFMPA+GERKYD
Sbjct: 46  AAKPSGRLFAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRRGSLMMTFMPAIGERKYD 105

Query: 659 YERRQVFALSPTEVGSLISLESGKSCEFFHDPSMKSSNAGQVRKSLSVSPYGEDSGFFFN 480
           +E++Q FALSPTEVGSLIS+ S  S EFFHDPSMKSSNAGQVRKSLSV P+ + SG+F +
Sbjct: 106 WEKKQKFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSVKPHADGSGYFIS 165

Query: 479 LSVVNNIQKTNERFSVPVSKAEFAVLRTAFSYILPHIMGWDQYTKPVQTSG-ELNSVRLL 303
           LSV N+I KTN+ F VPV+KAEFAV++TAFS+ LPHIMGW++ T  V T      +V  L
Sbjct: 166 LSVNNSILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRLTGHVNTEALPSRNVSHL 225

Query: 302 EKRPSPNSEWDR 267
           +  P    EWD+
Sbjct: 226 KTEPQLELEWDK 237


>ref|NP_177282.2| protein WHIRLY 2 [Arabidopsis thaliana]
           gi|75161474|sp|Q8VYF7.1|WHY2_ARATH RecName:
           Full=Single-stranded DNA-binding protein WHY2,
           mitochondrial; AltName: Full=Protein WHIRLY 2;
           Short=AtWHY2; Flags: Precursor
           gi|18175814|gb|AAL59932.1| unknown protein [Arabidopsis
           thaliana] gi|21689867|gb|AAM67494.1| unknown protein
           [Arabidopsis thaliana] gi|225898076|dbj|BAH30370.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332197060|gb|AEE35181.1| protein WHIRLY 2
           [Arabidopsis thaliana]
          Length = 238

 Score =  222 bits (566), Expect = 7e-56
 Identities = 115/192 (59%), Positives = 144/192 (75%), Gaps = 4/192 (2%)
 Frame = -1

Query: 830 AGSRTGYVNADYSIFKGKAALLTAPKIPTFNQI---NNRIDKKGCIMLTFMPAVGERKYD 660
           A   +G + A YSIFKGKAAL   P +P+F +I   N RID++G +M+TFMPA+GERKYD
Sbjct: 47  AAKPSGRLFAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRRGSLMMTFMPAIGERKYD 106

Query: 659 YERRQVFALSPTEVGSLISLESGKSCEFFHDPSMKSSNAGQVRKSLSVSPYGEDSGFFFN 480
           +E++Q FALSPTEVGSLIS+ S  S EFFHDPSMKSSNAGQVRKSLSV P+ + SG+F +
Sbjct: 107 WEKKQKFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSVKPHADGSGYFIS 166

Query: 479 LSVVNNIQKTNERFSVPVSKAEFAVLRTAFSYILPHIMGWDQYTKPVQTSG-ELNSVRLL 303
           LSV N+I KTN+ F VPV+KAEFAV++TAFS+ LPHIMGW++ T  V T      +V  L
Sbjct: 167 LSVNNSILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRLTGHVNTEALPSRNVSHL 226

Query: 302 EKRPSPNSEWDR 267
           +  P    EWD+
Sbjct: 227 KTEPQLELEWDK 238