BLASTX nr result

ID: Coptis23_contig00025496 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025496
         (1312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278498.1| PREDICTED: DTW domain-containing protein 2-l...   263   1e-67
gb|ADE75953.1| unknown [Picea sitchensis]                             238   2e-60
ref|XP_004149400.1| PREDICTED: DTW domain-containing protein 2-l...   230   5e-58
ref|XP_004163694.1| PREDICTED: LOW QUALITY PROTEIN: DTW domain-c...   229   1e-57
ref|XP_003520518.1| PREDICTED: DTW domain-containing protein 2-l...   226   8e-57

>ref|XP_002278498.1| PREDICTED: DTW domain-containing protein 2-like [Vitis vinifera]
          Length = 254

 Score =  263 bits (671), Expect = 1e-67
 Identities = 137/237 (57%), Positives = 168/237 (70%)
 Frame = -2

Query: 1224 RQICSKGCARPANVCLCNLLPKQPILISTKLVILHHPHEHRHKLATVPILTKCLTNCQIK 1045
            R+IC   C+RP NVCLC  LP +PI  +T++VILHHPHEHRHKL+TVPILTKCL N    
Sbjct: 31   RRICDN-CSRPENVCLCGSLPSEPISTATQIVILHHPHEHRHKLSTVPILTKCLLNTHTI 89

Query: 1044 IGRRLRCGSFSFLDSLYNASVMDPLLPHHAVFLFPGTESSPSVELNQWVSANSDKIDINN 865
            +GRRLR GS + LDSL+++S  D L    A++LFPG  S+   +LN              
Sbjct: 90   VGRRLRHGSSAMLDSLHSSSSTDQL--PRAIYLFPGPTSTHISQLNPKPGT--------- 138

Query: 864  LVLIVFDGTWKHAKEMVSASLPFLSKFASQVCLNYDVGVDGETIFDSELVLRKEPFSGCM 685
             VLI+FD TWKHAKEMV AS  +LS FA + CL+ D G  G +IFDSEL+LRKEPF GC+
Sbjct: 139  -VLILFDATWKHAKEMVDASAEYLSTFAIRACLDCDFGETGGSIFDSELILRKEPFRGCV 197

Query: 684  STIEVVARSLRVLESNGIEIEEVLISVLRAMVRFQACHLKPVKPRPKLMKKGKEANE 514
            ST+E  AR+LR LE NG EIE  L++VLR MV+FQA HLKP+KPRPKL+KKG+   E
Sbjct: 198  STMEAAARALRFLEPNGPEIESRLLNVLREMVKFQASHLKPMKPRPKLLKKGQPKKE 254


>gb|ADE75953.1| unknown [Picea sitchensis]
          Length = 264

 Score =  238 bits (608), Expect = 2e-60
 Identities = 129/255 (50%), Positives = 172/255 (67%), Gaps = 16/255 (6%)
 Frame = -2

Query: 1245 QPNQNKPRQICSKGCARPANVCLCNLLPKQPILISTKLVILHHPHEHRHKLATVPILTKC 1066
            +  Q + R+ C  GC RPANVCLCN+LP + +  ST+++IL HPHE RHKL+TVP++ KC
Sbjct: 7    EQKQKQQREKCRGGCERPANVCLCNVLPSEALETSTRIIILQHPHELRHKLSTVPLIQKC 66

Query: 1065 LTNCQIKIGRRLRCGSFSFLDSLYNASVMDPLLPHHAVFLFPGTESSPSVELNQWVSANS 886
            L N Q+ +GRRL  GS   LD++ + S  +     H +FLFPG E++   +L  W+S  +
Sbjct: 67   LHNSQVIVGRRLHMGSSPILDAICSQSDAEKSKCGHVLFLFPGEEAT---DLETWISNRA 123

Query: 885  D--------KIDINN----LVLIVFDGTWKHAKEMVSASLPFLSKF-ASQVCLNYDVGVD 745
                     +I+  N    L+LIV DGTW+HAKEMV AS+ FLS   A QVCL YD    
Sbjct: 124  QSGMPDHPPQIENENGGILLLLIVIDGTWQHAKEMVKASMAFLSSIKAFQVCLPYDRNTQ 183

Query: 744  GETIFDSELVLRKEPFSGCMSTIEVVARSLRVLESN--GIEIEEVLISVLRAMVRFQACH 571
            G ++++S+L+LRKEPF GC+STIE VARSLR+LE     +EIE  L+SVL AMV FQ+ +
Sbjct: 184  GHSMWNSDLILRKEPFGGCVSTIEAVARSLRILEPTPFAVEIEHRLLSVLHAMVAFQSHN 243

Query: 570  L-KPVKPRPKLMKKG 529
            L KP+KPRP+L KKG
Sbjct: 244  LKKPMKPRPRLHKKG 258


>ref|XP_004149400.1| PREDICTED: DTW domain-containing protein 2-like [Cucumis sativus]
          Length = 246

 Score =  230 bits (587), Expect = 5e-58
 Identities = 127/235 (54%), Positives = 152/235 (64%), Gaps = 1/235 (0%)
 Frame = -2

Query: 1224 RQICSKGCARPANVCLCNLLPKQPILISTKLVILHHPHEHRHKLATVPILTKCLTNCQIK 1045
            R ICS  C RP  VCLC  LP  PI   TK++IL HPHE +HKL+T PILTKCL N    
Sbjct: 22   RSICSN-CNRPQPVCLCKFLPSPPIATKTKIIILQHPHESQHKLSTTPILTKCLLNATTI 80

Query: 1044 IGRRLRCGSFSFLDSLYNASVMDPLLPHHAVFLFPGT-ESSPSVELNQWVSANSDKIDIN 868
            + RRL+ G    LD              HAVFLFP T  SSP + +       SD     
Sbjct: 81   VNRRLKPGLSKLLDQ-----------SPHAVFLFPPTPHSSPPINI-------SDLNITE 122

Query: 867  NLVLIVFDGTWKHAKEMVSASLPFLSKFASQVCLNYDVGVDGETIFDSELVLRKEPFSGC 688
            +LVLI FDGTWKHAKEMV +S  +LS+FA +VCL+ D  V+G +IFDSEL+LRKEP  GC
Sbjct: 123  DLVLIAFDGTWKHAKEMVRSSEEYLSRFARRVCLDIDESVEGGSIFDSELILRKEPHGGC 182

Query: 687  MSTIEVVARSLRVLESNGIEIEEVLISVLRAMVRFQACHLKPVKPRPKLMKKGKE 523
            +ST+E VAR LRV+E +G  +EE LI VLR MVR QA  LKP+ PRPKL+K  K+
Sbjct: 183  VSTMEAVARCLRVMELDGAAVEEKLIGVLREMVRLQAGFLKPMNPRPKLLKSLKK 237


>ref|XP_004163694.1| PREDICTED: LOW QUALITY PROTEIN: DTW domain-containing protein 2-like
            [Cucumis sativus]
          Length = 246

 Score =  229 bits (584), Expect = 1e-57
 Identities = 127/235 (54%), Positives = 151/235 (64%), Gaps = 1/235 (0%)
 Frame = -2

Query: 1224 RQICSKGCARPANVCLCNLLPKQPILISTKLVILHHPHEHRHKLATVPILTKCLTNCQIK 1045
            R ICS  C RP  VCLC  LP  PI   TK +IL HPHE +HKL+T PILTKCL N    
Sbjct: 22   RSICSN-CNRPQPVCLCKFLPSPPIATKTKXIILQHPHESQHKLSTTPILTKCLLNATTI 80

Query: 1044 IGRRLRCGSFSFLDSLYNASVMDPLLPHHAVFLFPGT-ESSPSVELNQWVSANSDKIDIN 868
            + RRL+ G    LD              HAVFLFP T  SSP + +       SD     
Sbjct: 81   VNRRLKPGLSKLLDQ-----------SPHAVFLFPPTPHSSPPINI-------SDLNITE 122

Query: 867  NLVLIVFDGTWKHAKEMVSASLPFLSKFASQVCLNYDVGVDGETIFDSELVLRKEPFSGC 688
            +LVLI FDGTWKHAKEMV +S  +LS+FA +VCL+ D  V+G +IFDSEL+LRKEP  GC
Sbjct: 123  DLVLIAFDGTWKHAKEMVRSSEEYLSRFARRVCLDIDESVEGGSIFDSELILRKEPHGGC 182

Query: 687  MSTIEVVARSLRVLESNGIEIEEVLISVLRAMVRFQACHLKPVKPRPKLMKKGKE 523
            +ST+E VAR LRV+E +G  +EE LI VLR MVR QA  LKP+ PRPKL+K  K+
Sbjct: 183  VSTMEAVARCLRVMELDGAAVEEKLIGVLREMVRLQAGFLKPMNPRPKLLKSLKK 237


>ref|XP_003520518.1| PREDICTED: DTW domain-containing protein 2-like [Glycine max]
          Length = 242

 Score =  226 bits (577), Expect = 8e-57
 Identities = 133/264 (50%), Positives = 166/264 (62%), Gaps = 2/264 (0%)
 Frame = -2

Query: 1284 ESEPQLTQFEFEEQPNQNKPRQICSKGCARPANVCLCNLLPKQPILISTKLVILHHPHEH 1105
            E E     F   E+P++ + R ICS  C RP+ VCLC+ LP  PI  +T+++I+ HPHE 
Sbjct: 2    EVEAAEADFPSPEEPHRQR-RSICSN-CDRPSRVCLCHALPLPPIQTTTQILIIQHPHEA 59

Query: 1104 RHKLATVPILTKCLTNCQIKIGRRLRCGSFSFLDSLYNASVMDPLLPHH--AVFLFPGTE 931
            RHKL+T PILTK L        RRLR G             + PLL     A++LFP + 
Sbjct: 60   RHKLSTTPILTKSLLRASSLTARRLRRG-------------LSPLLDRSPPALYLFPSSA 106

Query: 930  SSPSVELNQWVSANSDKIDINNLVLIVFDGTWKHAKEMVSASLPFLSKFASQVCLNYDVG 751
            S+  +         S     + LVLI FD TW+HA+EMVSAS  FLSKFA++VCL  D  
Sbjct: 107  SALHI---------SSLRPSSGLVLIAFDATWQHAREMVSASEEFLSKFATRVCLGIDES 157

Query: 750  VDGETIFDSELVLRKEPFSGCMSTIEVVARSLRVLESNGIEIEEVLISVLRAMVRFQACH 571
              G +I+DSELVLRKEP +GC+ST+E VAR+LRVLE NG+EIE  L+ VLR MVR QA  
Sbjct: 158  SSGGSIYDSELVLRKEPSAGCVSTMEAVARALRVLEPNGVEIEARLVGVLREMVRLQAGF 217

Query: 570  LKPVKPRPKLMKKGKEANELKSQI 499
            LKPVKPRPKL+KK KE NE   Q+
Sbjct: 218  LKPVKPRPKLLKK-KEKNEGSDQV 240


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