BLASTX nr result

ID: Coptis23_contig00025480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025480
         (565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN05718.1| FAR1; Zinc finger, SWIM-type [Medicago truncatula]     188   4e-46
gb|EEE63476.1| hypothetical protein OsJ_18290 [Oryza sativa Japo...   180   2e-43
ref|XP_003581428.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...   177   1e-42
gb|EEE63447.1| hypothetical protein OsJ_18260 [Oryza sativa Japo...   174   1e-41
gb|EEC74573.1| hypothetical protein OsI_10136 [Oryza sativa Indi...   174   1e-41

>gb|ABN05718.1| FAR1; Zinc finger, SWIM-type [Medicago truncatula]
          Length = 800

 Score =  188 bits (478), Expect = 4e-46
 Identities = 87/181 (48%), Positives = 114/181 (62%), Gaps = 2/181 (1%)
 Frame = -3

Query: 542 NPSFTFKIETNNEQRITHCFWADATSRRAYKFYGDVVIFDTTYNTNRYGLILAPLFGVNN 363
           NPSF +  E +NE ++ H FWAD   R+ Y  +GDVV FDTTY TN+Y +I AP  G+N+
Sbjct: 288 NPSFFYDYEADNEGKLKHVFWADGICRKNYSLFGDVVSFDTTYRTNKYFMIFAPFTGINH 347

Query: 362 HGQTVVFACSFLCDETTESFIWLFNQFLEAMPGNPPKMIITDQDPAMTKAISQTLPTTFH 183
           H Q++ F  + L +E  ESF+WLF  FL+AM G+ P MIITDQD  M  AI   L  + H
Sbjct: 348 HRQSITFGAALLKNEKEESFVWLFETFLKAMGGHKPVMIITDQDGGMKNAIGAVLKGSSH 407

Query: 182 RYCSWHILMKFSMKIDSVI--YSKYYTEFSNCIWGSEMKDEFDLKWNGILQQSGLHENKW 9
           R+C WHIL K S K+ S +   S +   F +C+W SE  +EFDL+WN I+    L  N W
Sbjct: 408 RFCMWHILKKLSEKVGSSMDENSGFNDRFKSCVWNSESSEEFDLEWNNIISDYSLEGNGW 467

Query: 8   L 6
           L
Sbjct: 468 L 468


>gb|EEE63476.1| hypothetical protein OsJ_18290 [Oryza sativa Japonica Group]
          Length = 664

 Score =  180 bits (456), Expect = 2e-43
 Identities = 81/180 (45%), Positives = 117/180 (65%), Gaps = 2/180 (1%)
 Frame = -3

Query: 542 NPSFTFKIETNNEQRITHCFWADATSRRAYKFYGDVVIFDTTYNTNRYGLILAPLFGVNN 363
           NP F F    +++ R+ H FWADA  R+ Y  +GD+V FD+TY+TN YG++  P  GVN+
Sbjct: 219 NPGFYFDYVVDDKGRLIHVFWADAICRKNYAHFGDLVSFDSTYSTNEYGMVFTPFTGVNH 278

Query: 362 HGQTVVFACSFLCDETTESFIWLFNQFLEAMPGNPPKMIITDQDPAMTKAISQTLPTTFH 183
           H  +V+F  + L DET ES++WLF+ FL+AM G  PK+IITD+  +M  AI + L TT H
Sbjct: 279 HKSSVLFGATMLSDETMESYMWLFHTFLKAMGGVAPKLIITDEAASMKAAIREVLTTTIH 338

Query: 182 RYCSWHILMKFSMKIDSVIY--SKYYTEFSNCIWGSEMKDEFDLKWNGILQQSGLHENKW 9
           R C WHILMK   K+  ++    K+    S+C+W SE   EF+ +W+ I+ + GL +N+W
Sbjct: 339 RLCMWHILMKVCEKVGPILKEDEKFKARLSSCVWSSETPLEFEDEWSCIIYEYGLEDNEW 398


>ref|XP_003581428.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Brachypodium
           distachyon]
          Length = 548

 Score =  177 bits (448), Expect = 1e-42
 Identities = 86/190 (45%), Positives = 119/190 (62%), Gaps = 4/190 (2%)
 Frame = -3

Query: 563 LELEQGRNPSFTFKIETNNEQRITHCFWADATSRRAYKFYGD--VVIFDTTYNTNRYGLI 390
           L  +Q  NP F +    N+E ++ + FWADATSR+ Y  +G   VV FD+TY TN+Y +I
Sbjct: 187 LARKQEVNPGFFYDFVVNDEGKLEYVFWADATSRKNYSHFGGDGVVSFDSTYTTNQYDMI 246

Query: 389 LAPLFGVNNHGQTVVFACSFLCDETTESFIWLFNQFLEAMPGNPPKMIITDQDPAMTKAI 210
            AP  GVN+H Q+V F  +FL +E  ES++WLF  FL AM G  P +IITD+  +M  AI
Sbjct: 247 FAPFTGVNHHLQSVFFGAAFLLNEKIESYVWLFKTFLRAMGGVAPSLIITDEAGSMKNAI 306

Query: 209 SQTLPTTFHRYCSWHILMKFSMKIDSVIYS--KYYTEFSNCIWGSEMKDEFDLKWNGILQ 36
            +  PTT HR C WHI+ K   KI  +I    +++   ++C+WGSE   EF+ +WN I+ 
Sbjct: 307 DEVFPTTAHRLCMWHIMEKVLEKIAPLIREELEFWKRMNSCVWGSETTAEFESQWNYIIF 366

Query: 35  QSGLHENKWL 6
             GL EN+WL
Sbjct: 367 DHGLEENEWL 376


>gb|EEE63447.1| hypothetical protein OsJ_18260 [Oryza sativa Japonica Group]
          Length = 748

 Score =  174 bits (440), Expect = 1e-41
 Identities = 80/187 (42%), Positives = 116/187 (62%), Gaps = 2/187 (1%)
 Frame = -3

Query: 563 LELEQGRNPSFTFKIETNNEQRITHCFWADATSRRAYKFYGDVVIFDTTYNTNRYGLILA 384
           LE ++  NP+F ++   + + R+   FWADA  R+ Y  +GDV+  D+TY+TN+Y +   
Sbjct: 285 LERKKEVNPAFFYEFMVDKQGRLVRVFWADAICRKNYSVFGDVLSVDSTYSTNQYNMKFV 344

Query: 383 PLFGVNNHGQTVVFACSFLCDETTESFIWLFNQFLEAMPGNPPKMIITDQDPAMTKAISQ 204
           P  GVN+H Q+V    SFL DE  ESF+WLF  FL+A  G  P++IITD+D +M  AI+Q
Sbjct: 345 PFTGVNHHLQSVFLGASFLADEKIESFVWLFQTFLKATGGVAPRLIITDEDASMKAAIAQ 404

Query: 203 TLPTTFHRYCSWHILMKFSMKIDSVIY--SKYYTEFSNCIWGSEMKDEFDLKWNGILQQS 30
            LP T HR C WHI+ K   K+   I    +++     C+WGSE  D+F+ +WN I+ + 
Sbjct: 405 ILPNTVHRLCMWHIMEKVPEKVGPSIREDGEFWDRLHKCVWGSEDSDDFESEWNSIMAKY 464

Query: 29  GLHENKW 9
           GL  N+W
Sbjct: 465 GLIGNEW 471


>gb|EEC74573.1| hypothetical protein OsI_10136 [Oryza sativa Indica Group]
          Length = 1025

 Score =  174 bits (440), Expect = 1e-41
 Identities = 80/187 (42%), Positives = 116/187 (62%), Gaps = 2/187 (1%)
 Frame = -3

Query: 563  LELEQGRNPSFTFKIETNNEQRITHCFWADATSRRAYKFYGDVVIFDTTYNTNRYGLILA 384
            LE ++  NP+F ++   + + R+   FWADA  R+ Y  +GDV+  D+TY+TN+Y +   
Sbjct: 834  LERKKEVNPAFFYEFMVDKQGRLVRVFWADAICRKNYSVFGDVLSVDSTYSTNQYNMKFV 893

Query: 383  PLFGVNNHGQTVVFACSFLCDETTESFIWLFNQFLEAMPGNPPKMIITDQDPAMTKAISQ 204
            P  GVN+H Q+V    SFL DE  ESF+WLF  FL+A  G  P++IITD+D +M  AI+Q
Sbjct: 894  PFTGVNHHLQSVFLGASFLADEKIESFVWLFQTFLKATGGVAPRLIITDEDASMKAAIAQ 953

Query: 203  TLPTTFHRYCSWHILMKFSMKIDSVIY--SKYYTEFSNCIWGSEMKDEFDLKWNGILQQS 30
             LP T HR C WHI+ K   K+   I    +++     C+WGSE  D+F+ +WN I+ + 
Sbjct: 954  ILPNTVHRLCMWHIMEKVPEKVGPSIREDGEFWDRLHKCVWGSEDSDDFESEWNSIMAKY 1013

Query: 29   GLHENKW 9
            GL  N+W
Sbjct: 1014 GLIGNEW 1020


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