BLASTX nr result

ID: Coptis23_contig00025476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025476
         (1246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317282.1| predicted protein [Populus trichocarpa] gi|2...   627   e-177
ref|XP_002519647.1| ornithine aminotransferase, putative [Ricinu...   625   e-177
ref|XP_002278418.1| PREDICTED: probable ornithine aminotransfera...   619   e-175
emb|CAN73779.1| hypothetical protein VITISV_042180 [Vitis vinifera]   612   e-173
gb|AAG09278.1|AF177590_1 ornithine aminotransferase [Vitis vinif...   609   e-172

>ref|XP_002317282.1| predicted protein [Populus trichocarpa] gi|222860347|gb|EEE97894.1|
            predicted protein [Populus trichocarpa]
          Length = 469

 Score =  627 bits (1618), Expect = e-177
 Identities = 302/382 (79%), Positives = 342/382 (89%), Gaps = 2/382 (0%)
 Frame = -2

Query: 1140 MAT-RRSVQLIVNKFCK-GRRSFSAVPQGSSFTAAASQHLINLENEHSAHNYHPIPVVFS 967
            MAT +R +Q ++++ C+  RR++  +PQG     + SQHLINLE E+SAHNYHP+P+VFS
Sbjct: 1    MATSKRPLQRLLSRVCREARRTYGVLPQGHGHDPSFSQHLINLEYEYSAHNYHPVPIVFS 60

Query: 966  KAKGSCIWDPEGHKYLDFLSAYSAVNQGHCHPKVMKALSEQAERLTLSSRAFYNDKFPIF 787
            KAKGSCIWDPEG+KYLDFLSAYSAVNQGHCHP++MKAL EQAE+LTLSSRAFYND+FP+F
Sbjct: 61   KAKGSCIWDPEGNKYLDFLSAYSAVNQGHCHPRIMKALQEQAEKLTLSSRAFYNDRFPVF 120

Query: 786  AELLTSLFGYEMVLPMNTGAEGVETALKLARKWGYEKKNIPKDEAIIVSCCGCFHGRTLA 607
            AE LT++FGY+MVLPMNTGAEGVETALKLARKWGYEKK IP DEAII+SCCGCFHGRTLA
Sbjct: 121  AEHLTNMFGYDMVLPMNTGAEGVETALKLARKWGYEKKKIPIDEAIIISCCGCFHGRTLA 180

Query: 606  VISMSCDNDATRGFGPLLPGHLKVDFGDVSGLEKILMENGDCIAGFLFEPIQGEAGVVIP 427
             ISMSCDN+ATRGFGPLL GHLKVDFGDV  LEK   E GD IAGFLFEPIQGEAGV+IP
Sbjct: 181  AISMSCDNEATRGFGPLLSGHLKVDFGDVVSLEKSFREQGDRIAGFLFEPIQGEAGVIIP 240

Query: 426  PDGYLKAARELCSKHNVLMIADEIQTGIARTGRMLACDWEDVRPDVVILGKALGAGVIPV 247
            PDGYLK+ R+LCSK+NVLMIADEIQTG+ARTG+MLACDWE VRPDVVILGKALG GVIPV
Sbjct: 241  PDGYLKSVRDLCSKYNVLMIADEIQTGLARTGKMLACDWEQVRPDVVILGKALGGGVIPV 300

Query: 246  SAVLADKDIMLCFKPGEHGSTFGGNPLASAVGIASLQVIMEEGLAKRADQMGQEFRQQLV 67
            SAVLADKD+MLC +PGEHGSTFGGNPLASAV IASL VI EEGLA+R+  +G+E R QL+
Sbjct: 301  SAVLADKDVMLCIRPGEHGSTFGGNPLASAVAIASLDVIKEEGLAERSYHLGKELRHQLL 360

Query: 66   RVQQKFPDIIKEVRGRGLLNAV 1
            +VQQ+FPDIIKEVRGRGL NAV
Sbjct: 361  KVQQQFPDIIKEVRGRGLFNAV 382


>ref|XP_002519647.1| ornithine aminotransferase, putative [Ricinus communis]
            gi|223541064|gb|EEF42620.1| ornithine aminotransferase,
            putative [Ricinus communis]
          Length = 473

 Score =  625 bits (1612), Expect = e-177
 Identities = 300/380 (78%), Positives = 344/380 (90%), Gaps = 1/380 (0%)
 Frame = -2

Query: 1137 ATRRSVQLIVNKFCKG-RRSFSAVPQGSSFTAAASQHLINLENEHSAHNYHPIPVVFSKA 961
            +T+R VQ ++N+ C+  RRS+ A+P+G+  T+++SQ LI LE + SAHNYHP+P+VFS+A
Sbjct: 3    STKRLVQCLLNRVCRETRRSYGALPEGT--TSSSSQQLIGLEYDFSAHNYHPVPIVFSRA 60

Query: 960  KGSCIWDPEGHKYLDFLSAYSAVNQGHCHPKVMKALSEQAERLTLSSRAFYNDKFPIFAE 781
            KGS IWDPEG+KYLDFLSAYSAVNQGHCHPK+MKAL +QAE+LTLSSRAFYND+FP+FAE
Sbjct: 61   KGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALKDQAEKLTLSSRAFYNDRFPLFAE 120

Query: 780  LLTSLFGYEMVLPMNTGAEGVETALKLARKWGYEKKNIPKDEAIIVSCCGCFHGRTLAVI 601
             LTS+FGY+MVLPMNTGAEGVETALKLARKWGYEKK I KDEAIIVSCCGCFHGRT+AVI
Sbjct: 121  RLTSMFGYDMVLPMNTGAEGVETALKLARKWGYEKKKITKDEAIIVSCCGCFHGRTIAVI 180

Query: 600  SMSCDNDATRGFGPLLPGHLKVDFGDVSGLEKILMENGDCIAGFLFEPIQGEAGVVIPPD 421
            SMSCDN+ATRGFGPLLPGH KVDFGD   LEKI  E GD IAGFLFEPIQGEAGVVIPPD
Sbjct: 181  SMSCDNEATRGFGPLLPGHFKVDFGDEVALEKIFKERGDRIAGFLFEPIQGEAGVVIPPD 240

Query: 420  GYLKAARELCSKHNVLMIADEIQTGIARTGRMLACDWEDVRPDVVILGKALGAGVIPVSA 241
            GYLKA R+LCSK+NVLMIADEIQTG+ARTG+MLACDWE VRPDVVILGKALG GVIPVSA
Sbjct: 241  GYLKAVRDLCSKYNVLMIADEIQTGLARTGKMLACDWEQVRPDVVILGKALGGGVIPVSA 300

Query: 240  VLADKDIMLCFKPGEHGSTFGGNPLASAVGIASLQVIMEEGLAKRADQMGQEFRQQLVRV 61
            VLADKD+MLC +PGEHGSTFGGNPLASAV +ASL V+++EGLA+R+ Q+G+E R QL++V
Sbjct: 301  VLADKDVMLCIQPGEHGSTFGGNPLASAVAVASLDVVIDEGLAERSAQLGEELRDQLLKV 360

Query: 60   QQKFPDIIKEVRGRGLLNAV 1
            QQ+FPD IKEVRGRGL NAV
Sbjct: 361  QQQFPDYIKEVRGRGLFNAV 380


>ref|XP_002278418.1| PREDICTED: probable ornithine aminotransferase [Vitis vinifera]
            gi|297740745|emb|CBI30927.3| unnamed protein product
            [Vitis vinifera]
          Length = 466

 Score =  619 bits (1595), Expect = e-175
 Identities = 302/380 (79%), Positives = 336/380 (88%)
 Frame = -2

Query: 1140 MATRRSVQLIVNKFCKGRRSFSAVPQGSSFTAAASQHLINLENEHSAHNYHPIPVVFSKA 961
            +ATRR      N  C+G RSF A+P+G     ++SQHLINLE E+SAHNYHPIP+VFS+A
Sbjct: 3    LATRR----FFNTICRGTRSFGALPEG---IPSSSQHLINLEYEYSAHNYHPIPIVFSQA 55

Query: 960  KGSCIWDPEGHKYLDFLSAYSAVNQGHCHPKVMKALSEQAERLTLSSRAFYNDKFPIFAE 781
            KGS IWDPEG KYLDFLSAYSAVNQGHCHPKV+KAL EQAERLTLSSRAFYND+FPIFAE
Sbjct: 56   KGSTIWDPEGKKYLDFLSAYSAVNQGHCHPKVLKALVEQAERLTLSSRAFYNDRFPIFAE 115

Query: 780  LLTSLFGYEMVLPMNTGAEGVETALKLARKWGYEKKNIPKDEAIIVSCCGCFHGRTLAVI 601
             L ++FGY+MVLPMNTGAEGVETALKLARKWGYEKK IPKD+AIIVSCCGCFHGRTLAVI
Sbjct: 116  RLKNMFGYDMVLPMNTGAEGVETALKLARKWGYEKKKIPKDQAIIVSCCGCFHGRTLAVI 175

Query: 600  SMSCDNDATRGFGPLLPGHLKVDFGDVSGLEKILMENGDCIAGFLFEPIQGEAGVVIPPD 421
            SMSCDN+ATRGFGPLLPGHLKVDFGD   LEKI  ENGD IAGFLFEPIQGEAGV+IPPD
Sbjct: 176  SMSCDNEATRGFGPLLPGHLKVDFGDEVALEKIFEENGDRIAGFLFEPIQGEAGVIIPPD 235

Query: 420  GYLKAARELCSKHNVLMIADEIQTGIARTGRMLACDWEDVRPDVVILGKALGAGVIPVSA 241
            GYLKA RELCSK N+LMIADEIQ+G+ R+GRMLACDW +VRPDVVILGKALG GVI VSA
Sbjct: 236  GYLKAVRELCSKFNILMIADEIQSGLGRSGRMLACDWAEVRPDVVILGKALGGGVIAVSA 295

Query: 240  VLADKDIMLCFKPGEHGSTFGGNPLASAVGIASLQVIMEEGLAKRADQMGQEFRQQLVRV 61
            VLADKD+ML  +PGEHGSTFGGNPLASAV +ASL VI EEGL++R+DQMGQE R QL+++
Sbjct: 296  VLADKDVMLSIQPGEHGSTFGGNPLASAVAVASLDVITEEGLSERSDQMGQELRNQLMKI 355

Query: 60   QQKFPDIIKEVRGRGLLNAV 1
             Q FP++IKEVRG+GL NAV
Sbjct: 356  HQLFPNLIKEVRGKGLFNAV 375


>emb|CAN73779.1| hypothetical protein VITISV_042180 [Vitis vinifera]
          Length = 473

 Score =  612 bits (1577), Expect = e-173
 Identities = 302/387 (78%), Positives = 336/387 (86%), Gaps = 7/387 (1%)
 Frame = -2

Query: 1140 MATRRSVQLIVNKFCKGRRSFSAVPQGSSFTAAASQHLINLENEHSAHNYHPIPVVFSKA 961
            +ATRR      N  C+G RSF A+P+G     ++SQHLINLE E+SAHNYHPIP+VFS+A
Sbjct: 3    LATRR----FFNTICRGTRSFGALPEG---IPSSSQHLINLEYEYSAHNYHPIPIVFSQA 55

Query: 960  KGSCIWDPEGHKYLDFLSAYSAVNQGHCHPKVMKALSEQAERLTLSSRAFYNDKFPIFAE 781
            KGS IWDPEG KYLDFLSAYSAVNQGHCHPKV+KAL EQAERLTLSSRAFYND+FPIFAE
Sbjct: 56   KGSTIWDPEGKKYLDFLSAYSAVNQGHCHPKVLKALVEQAERLTLSSRAFYNDRFPIFAE 115

Query: 780  LLTSLFGYEMVLPMNTGAEGVETALKLARKWGYEKKNIPKDEAIIVSCCGCFHGRTLAVI 601
             L ++FGY+MVLPMNTGAEGVETALKLARKWGYEKK IPKD+AIIVSCCGCFHGRTLAVI
Sbjct: 116  RLXNMFGYDMVLPMNTGAEGVETALKLARKWGYEKKKIPKDQAIIVSCCGCFHGRTLAVI 175

Query: 600  SMSCDNDATRGFGPLLPGHLKVDFGDVSGLEKILMENGDCIAGFLFEPIQGEAGVVIPPD 421
            SMSCDN+ATRGFGPLLPGHLKVDFGD   LEKI  ENGD IAGFLFEPIQGEAGV+IPPD
Sbjct: 176  SMSCDNEATRGFGPLLPGHLKVDFGDEVALEKIFEENGDRIAGFLFEPIQGEAGVIIPPD 235

Query: 420  GYLKAARELCSKHNVLMIADEIQTGIARTGRMLACDWEDVRPDVVILGKALGAGVIPVSA 241
            GYLKA RELCSK N+LMIADEIQ+G+ R+GRMLACDW +VRPDVVILGKALG GVI VSA
Sbjct: 236  GYLKAVRELCSKFNILMIADEIQSGLGRSGRMLACDWAEVRPDVVILGKALGGGVIAVSA 295

Query: 240  VLADKDIMLCFKPGEHGSTFGGNPLASAVGIASLQVIMEEGLAKR-------ADQMGQEF 82
            VLADKD+ML  +PGEHGSTFGGNPLASAV +ASL VI EEGL++R       +DQMGQE 
Sbjct: 296  VLADKDVMLSIQPGEHGSTFGGNPLASAVAVASLDVITEEGLSERQEICYLISDQMGQEL 355

Query: 81   RQQLVRVQQKFPDIIKEVRGRGLLNAV 1
            R QL+++ Q FP++IKEVRG+GL NAV
Sbjct: 356  RNQLMKIHQLFPNLIKEVRGKGLFNAV 382


>gb|AAG09278.1|AF177590_1 ornithine aminotransferase [Vitis vinifera]
          Length = 466

 Score =  609 bits (1570), Expect = e-172
 Identities = 299/380 (78%), Positives = 333/380 (87%)
 Frame = -2

Query: 1140 MATRRSVQLIVNKFCKGRRSFSAVPQGSSFTAAASQHLINLENEHSAHNYHPIPVVFSKA 961
            +ATRR      N  C+G RSF A+P+G     ++SQHLINLE E+SAHNYHPIP+VFS+A
Sbjct: 3    LATRR----FFNTICRGTRSFGALPEG---IPSSSQHLINLEYEYSAHNYHPIPIVFSQA 55

Query: 960  KGSCIWDPEGHKYLDFLSAYSAVNQGHCHPKVMKALSEQAERLTLSSRAFYNDKFPIFAE 781
            KGS IWDPEG KYLDFLSAYSAVNQGHCHPKV+KAL EQAERLTLSSRAFYND+FPIFAE
Sbjct: 56   KGSTIWDPEGKKYLDFLSAYSAVNQGHCHPKVLKALVEQAERLTLSSRAFYNDRFPIFAE 115

Query: 780  LLTSLFGYEMVLPMNTGAEGVETALKLARKWGYEKKNIPKDEAIIVSCCGCFHGRTLAVI 601
             L ++FGY+MVLPMNTGAEGVETALKLARKWGYEKK IPKD+AIIVSCCG  HGRTLAVI
Sbjct: 116  RLMNMFGYDMVLPMNTGAEGVETALKLARKWGYEKKKIPKDQAIIVSCCGLLHGRTLAVI 175

Query: 600  SMSCDNDATRGFGPLLPGHLKVDFGDVSGLEKILMENGDCIAGFLFEPIQGEAGVVIPPD 421
            SMSCDN+ATRGFGPLLPGHLKVDFGD   LEKI  ENGD IAGFLFEPIQGEAGV+IPPD
Sbjct: 176  SMSCDNEATRGFGPLLPGHLKVDFGDEVALEKIFEENGDRIAGFLFEPIQGEAGVIIPPD 235

Query: 420  GYLKAARELCSKHNVLMIADEIQTGIARTGRMLACDWEDVRPDVVILGKALGAGVIPVSA 241
            GYLKA RELCSK N+LMIADEIQ+G+ R+GRMLACDW +VRPDVVILGKALG GVI VSA
Sbjct: 236  GYLKAVRELCSKFNILMIADEIQSGLGRSGRMLACDWAEVRPDVVILGKALGGGVIAVSA 295

Query: 240  VLADKDIMLCFKPGEHGSTFGGNPLASAVGIASLQVIMEEGLAKRADQMGQEFRQQLVRV 61
            VLADKD+ML  +PGEHGSTFG NPLASAV +ASL VI EEGL++R+DQMGQE R QL+++
Sbjct: 296  VLADKDVMLSIQPGEHGSTFGVNPLASAVAVASLDVITEEGLSERSDQMGQELRNQLMKI 355

Query: 60   QQKFPDIIKEVRGRGLLNAV 1
             Q FP++IKEVRG+GL NAV
Sbjct: 356  HQLFPNLIKEVRGKGLFNAV 375


Top