BLASTX nr result

ID: Coptis23_contig00025474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025474
         (913 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265066.1| PREDICTED: uncharacterized protein LOC100260...   303   4e-80
ref|XP_002303945.1| predicted protein [Populus trichocarpa] gi|2...   301   1e-79
ref|XP_002299186.1| predicted protein [Populus trichocarpa] gi|2...   280   4e-73
ref|XP_002871245.1| hypothetical protein ARALYDRAFT_487519 [Arab...   277   3e-72
ref|NP_196316.1| uncharacterized protein [Arabidopsis thaliana] ...   276   5e-72

>ref|XP_002265066.1| PREDICTED: uncharacterized protein LOC100260942 [Vitis vinifera]
          Length = 249

 Score =  303 bits (776), Expect = 4e-80
 Identities = 142/224 (63%), Positives = 181/224 (80%)
 Frame = -2

Query: 678 PLQSPARPQISLREXXXXXXXXXSGRLXXXXXXXXXXFPIITPTCKMPVSLPGSRLSDGH 499
           P ++P+ P+++L++         S +L          FPII+P CK+PV L  SRL+D H
Sbjct: 26  PEKTPSHPKVALQQPSHKKASLKSTKLFRHFRSVFRSFPIISPACKIPVLLHNSRLNDVH 85

Query: 498 IHGGTRMTGTLYGCRKARINLSIQENPRCLPMLVLELAIPTAKLLQEMGSGLVRIALECE 319
           IHGGTRMTGTL+G RK R++L+IQE+PRC P+ +LE+AIPT+KLLQE+G GLVRIALECE
Sbjct: 86  IHGGTRMTGTLFGHRKGRVSLAIQESPRCFPIFLLEMAIPTSKLLQELGLGLVRIALECE 145

Query: 318 KHPAERTKLLEEPLWTMYCNGKKTGYGVKRDPNGDDLNTMQLLHAVSMGAGVLPSDSADM 139
           K P E+ KL++EP+W +YCNG+K GY VKR+ N +DLN MQ+LHAVSMGAGVLPS++ D+
Sbjct: 146 KRPEEKIKLMDEPIWNLYCNGRKMGYAVKREANAEDLNVMQMLHAVSMGAGVLPSEAIDL 205

Query: 138 PDGELTYMRAYFERVVGSKDSETFYMMNPDGNSGPELSIFFVRI 7
           PDGELTYMRA+F+RV+GSKDSET+YMMNPD N+GPELSIFFVRI
Sbjct: 206 PDGELTYMRAHFQRVIGSKDSETYYMMNPDSNTGPELSIFFVRI 249


>ref|XP_002303945.1| predicted protein [Populus trichocarpa] gi|222841377|gb|EEE78924.1|
           predicted protein [Populus trichocarpa]
          Length = 261

 Score =  301 bits (772), Expect = 1e-79
 Identities = 148/233 (63%), Positives = 182/233 (78%), Gaps = 2/233 (0%)
 Frame = -2

Query: 699 STAATEMPLQSPARPQISLREXXXXXXXXXSGRLXXXXXXXXXXFPIITPTCKMPVSLPG 520
           +T + ++   SP RP ISL++           ++          FPII P CK+PVSL G
Sbjct: 29  TTPSGKVNPMSPVRPTISLQQPNSKKGSSKHNKIFRRVRAVFRSFPIIAPACKIPVSLHG 88

Query: 519 SRLSDGHIHGGTRMTGTLYGCRKARINLSIQENPRCLPMLVLELAIPTAKLLQEMGSGLV 340
           +RL DGH+HGGTRMTGTL+G RKARINL+IQE+P  LP+L+LEL IPT KLLQ+MG GLV
Sbjct: 89  NRLHDGHVHGGTRMTGTLFGHRKARINLAIQESPGSLPVLLLELTIPTGKLLQDMGVGLV 148

Query: 339 RIALECEKHPAERTKLLEEPLWTMYCNGKKTGYGVKRDPNGDDLNTMQLLHAVSMGAGVL 160
           RIALECEK P E+TK+ +EP+WTM+CNG+K+GY VKR+P  +DLN MQ+LH VSMGAGV+
Sbjct: 149 RIALECEKKPHEKTKIEDEPIWTMFCNGRKSGYAVKREPTDEDLNVMQILHVVSMGAGVI 208

Query: 159 PS-DSADMP-DGELTYMRAYFERVVGSKDSETFYMMNPDGNSGPELSIFFVRI 7
           P+ D AD P DGELTYMRA+FERV GSKDSET+YM+NPDGN+GPELS+FFVRI
Sbjct: 209 PTGDGADQPADGELTYMRAFFERVAGSKDSETYYMLNPDGNNGPELSLFFVRI 261


>ref|XP_002299186.1| predicted protein [Populus trichocarpa] gi|222846444|gb|EEE83991.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  280 bits (715), Expect = 4e-73
 Identities = 139/223 (62%), Positives = 172/223 (77%), Gaps = 2/223 (0%)
 Frame = -2

Query: 669 SPARPQISLREXXXXXXXXXSGRLXXXXXXXXXXFPIITPTCKMPVSLPGSRLSDGHIHG 490
           SP +P ISL +           ++          FPIITP CK+PVSL G+RL DGH+ G
Sbjct: 6   SPIQPAISLHQPNGKKGSSKHNKIFRRVRAVFRSFPIITPACKIPVSLHGNRLHDGHV-G 64

Query: 489 GTRMTGTLYGCRKARINLSIQENPRCLPMLVLELAIPTAKLLQEMGSGLVRIALECEKHP 310
           GTRMTGTL+G RKAR++L+IQE+P  LP+L+LEL IPT KLLQ+MG GLVRIALECEK  
Sbjct: 65  GTRMTGTLFGHRKARVSLAIQESPGSLPILLLELTIPTGKLLQDMGVGLVRIALECEKKA 124

Query: 309 AERTKLLEEPLWTMYCNGKKTGYGVKRDPNGDDLNTMQLLHAVSMGAGVLPS-DSADMP- 136
            ++TK+ +EP+WT++CNG+K GY VKR+P  +DLN MQ L  VSMGAGV+P+ D AD P 
Sbjct: 125 NDKTKIEDEPIWTLFCNGRKCGYAVKREPTDEDLNVMQTLRVVSMGAGVIPTGDGADQPT 184

Query: 135 DGELTYMRAYFERVVGSKDSETFYMMNPDGNSGPELSIFFVRI 7
           DGELTYMRA+FERV GSKDSET+YM+NPDGN+GPELS+FFVR+
Sbjct: 185 DGELTYMRAFFERVAGSKDSETYYMLNPDGNNGPELSLFFVRL 227


>ref|XP_002871245.1| hypothetical protein ARALYDRAFT_487519 [Arabidopsis lyrata subsp.
           lyrata] gi|297317082|gb|EFH47504.1| hypothetical protein
           ARALYDRAFT_487519 [Arabidopsis lyrata subsp. lyrata]
          Length = 259

 Score =  277 bits (708), Expect = 3e-72
 Identities = 142/250 (56%), Positives = 176/250 (70%), Gaps = 20/250 (8%)
 Frame = -2

Query: 696 TAATEMPLQSP--------ARPQISLREXXXXXXXXXSG--RLXXXXXXXXXXFPIITPT 547
           T  T  PL SP         RP+I+L +         S   +L           PI++P 
Sbjct: 12  TPTTMSPLGSPKSKKSTATVRPEITLEQPSGRNKTAGSKSTKLFRRVRSVFRSLPIMSPM 71

Query: 546 CKMPVSLPGSRLSDGHIHGGTRMTGTLYGCRKARINLSIQENPRCLPMLVLELAIPTAKL 367
           CK PV   G RL + H+HGGTR+TGTL+G RK R+NL++QENPR LP+L+LELAIPT KL
Sbjct: 72  CKFPVG--GGRLHENHVHGGTRVTGTLFGYRKTRVNLAVQENPRSLPILLLELAIPTGKL 129

Query: 366 LQEMGSGLVRIALECEKHPAERTKLLEEPLWTMYCNGKKTGYGVKRDPNGDDLNTMQLLH 187
           LQ++G GLVRIALECEK P+E+TK+++EP+W +YCNGKK+GYGVKR P  +DL  MQ+LH
Sbjct: 130 LQDLGVGLVRIALECEKKPSEKTKIIDEPIWALYCNGKKSGYGVKRQPTEEDLVVMQMLH 189

Query: 186 AVSMGAGVLPSDS----------ADMPDGELTYMRAYFERVVGSKDSETFYMMNPDGNSG 37
           AVSMGAGVLP  S              +G+LTYMRA+FERV+GS+DSET+YMMNPDGNSG
Sbjct: 190 AVSMGAGVLPVSSGATEQSGGGGGGQQEGDLTYMRAHFERVIGSRDSETYYMMNPDGNSG 249

Query: 36  PELSIFFVRI 7
           PELSIFFVR+
Sbjct: 250 PELSIFFVRV 259


>ref|NP_196316.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9759555|dbj|BAB11157.1| unnamed protein product
           [Arabidopsis thaliana] gi|71905551|gb|AAZ52753.1|
           expressed protein [Arabidopsis thaliana]
           gi|332003713|gb|AED91096.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 261

 Score =  276 bits (706), Expect = 5e-72
 Identities = 142/251 (56%), Positives = 176/251 (70%), Gaps = 21/251 (8%)
 Frame = -2

Query: 696 TAATEMPLQSP--------ARPQISLREXXXXXXXXXSG--RLXXXXXXXXXXFPIITPT 547
           T  T  PL SP         RP+I+L +         S   +L           PI++P 
Sbjct: 12  TPTTMSPLGSPKSKKSTATVRPEITLEQPSGRNKTTGSKSTKLFRRVRSVFRSLPIMSPM 71

Query: 546 CKMPVSLPGSRLSDGHIHGGTRMTGTLYGCRKARINLSIQENPRCLPMLVLELAIPTAKL 367
           CK PV   G RL + H+HGGTR+TGTL+G RK R+NL++QENPR LP+L+LELAIPT KL
Sbjct: 72  CKFPVG-GGGRLHENHVHGGTRVTGTLFGYRKTRVNLAVQENPRSLPILLLELAIPTGKL 130

Query: 366 LQEMGSGLVRIALECEKHPAERTKLLEEPLWTMYCNGKKTGYGVKRDPNGDDLNTMQLLH 187
           LQ++G GLVRIALECEK P+E+TK+++EP+W +YCNGKK+GYGVKR P  +DL  MQ+LH
Sbjct: 131 LQDLGVGLVRIALECEKKPSEKTKIIDEPIWALYCNGKKSGYGVKRQPTEEDLVVMQMLH 190

Query: 186 AVSMGAGVLPSDS-----------ADMPDGELTYMRAYFERVVGSKDSETFYMMNPDGNS 40
           AVSMGAGVLP  S               +G+LTYMRA+FERV+GS+DSET+YMMNPDGNS
Sbjct: 191 AVSMGAGVLPVSSGAITEQSGGGGGGQQEGDLTYMRAHFERVIGSRDSETYYMMNPDGNS 250

Query: 39  GPELSIFFVRI 7
           GPELSIFFVR+
Sbjct: 251 GPELSIFFVRV 261


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