BLASTX nr result

ID: Coptis23_contig00025471 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025471
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633563.1| PREDICTED: tRNA-dihydrouridine synthase A-li...    71   1e-10
emb|CBI24913.3| unnamed protein product [Vitis vinifera]               71   1e-10
ref|XP_002277955.1| PREDICTED: tRNA-dihydrouridine synthase A-li...    71   1e-10
ref|XP_002517816.1| tRNA-dihydrouridine synthase A, putative [Ri...    70   2e-10
ref|XP_002314040.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10

>ref|XP_003633563.1| PREDICTED: tRNA-dihydrouridine synthase A-like isoform 2 [Vitis
           vinifera]
          Length = 377

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 30/39 (76%), Positives = 37/39 (94%)
 Frame = -2

Query: 137 DFVYTVASQSPTKHFVIHARKALLNGISPAANRKVPPLQ 21
           DF+Y V+SQSPT+HF+IH+RKALLNGISPA NRK+PPL+
Sbjct: 156 DFIYKVSSQSPTRHFIIHSRKALLNGISPADNRKIPPLK 194


>emb|CBI24913.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 30/39 (76%), Positives = 37/39 (94%)
 Frame = -2

Query: 137 DFVYTVASQSPTKHFVIHARKALLNGISPAANRKVPPLQ 21
           DF+Y V+SQSPT+HF+IH+RKALLNGISPA NRK+PPL+
Sbjct: 202 DFIYKVSSQSPTRHFIIHSRKALLNGISPADNRKIPPLK 240


>ref|XP_002277955.1| PREDICTED: tRNA-dihydrouridine synthase A-like isoform 1 [Vitis
           vinifera]
          Length = 433

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 30/39 (76%), Positives = 37/39 (94%)
 Frame = -2

Query: 137 DFVYTVASQSPTKHFVIHARKALLNGISPAANRKVPPLQ 21
           DF+Y V+SQSPT+HF+IH+RKALLNGISPA NRK+PPL+
Sbjct: 212 DFIYKVSSQSPTRHFIIHSRKALLNGISPADNRKIPPLK 250


>ref|XP_002517816.1| tRNA-dihydrouridine synthase A, putative [Ricinus communis]
           gi|223543088|gb|EEF44623.1| tRNA-dihydrouridine synthase
           A, putative [Ricinus communis]
          Length = 375

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 30/39 (76%), Positives = 36/39 (92%)
 Frame = -2

Query: 137 DFVYTVASQSPTKHFVIHARKALLNGISPAANRKVPPLQ 21
           DF+Y V+S SPTKHF+IH+RKALLNGISPA NRK+PPL+
Sbjct: 156 DFIYKVSSLSPTKHFIIHSRKALLNGISPAENRKIPPLK 194


>ref|XP_002314040.1| predicted protein [Populus trichocarpa] gi|222850448|gb|EEE87995.1|
           predicted protein [Populus trichocarpa]
          Length = 380

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 29/39 (74%), Positives = 36/39 (92%)
 Frame = -2

Query: 137 DFVYTVASQSPTKHFVIHARKALLNGISPAANRKVPPLQ 21
           DF+Y V+S SPTKHF+IH+RKALLNGISPA NR++PPL+
Sbjct: 156 DFIYKVSSLSPTKHFIIHSRKALLNGISPADNRRIPPLK 194


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