BLASTX nr result

ID: Coptis23_contig00025466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025466
         (719 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264379.2| PREDICTED: UPF0176 protein pc0378-like [Viti...   291   1e-76
ref|XP_002329728.1| predicted protein [Populus trichocarpa] gi|2...   280   3e-73
ref|XP_003525173.1| PREDICTED: UPF0176 protein pc0378-like isofo...   265   5e-69
gb|AFK48977.1| unknown [Lotus japonicus]                              263   3e-68
ref|XP_003532550.1| PREDICTED: LOW QUALITY PROTEIN: UPF0176 prot...   259   5e-67

>ref|XP_002264379.2| PREDICTED: UPF0176 protein pc0378-like [Vitis vinifera]
          Length = 441

 Score =  291 bits (744), Expect = 1e-76
 Identities = 141/187 (75%), Positives = 160/187 (85%), Gaps = 6/187 (3%)
 Frame = +1

Query: 175 RFVFIQDPHELVSTHLSFLKGLDIRGRIYLNEQGINAQFSGPSVDALMYLEWIKEDSRFS 354
           RFVFIQDP   VS HLSFL+G DI GR+Y+NEQGINAQ+SGPS DAL Y+EW++ED RFS
Sbjct: 92  RFVFIQDPELEVSKHLSFLQGFDIHGRVYINEQGINAQYSGPSKDALAYVEWLREDHRFS 151

Query: 355 DILAQISPSVNGHSFPRLKLRYKPSLVQLEGGISHLPLLDPSMRATPLAPSEWRNRLQA- 531
           DIL QISP+ NGH+FP+LKLRYKPSLVQLEGGISH+PLLDP +RAT LAPSEWR RL+A 
Sbjct: 152 DILVQISPASNGHAFPKLKLRYKPSLVQLEGGISHIPLLDPLLRATALAPSEWRKRLEAV 211

Query: 532 -----ASSLNLNSKAIVLDVRNGYEWDIGHFHGAQRPDVDCFRSTSFGLSESELIDSDPL 696
                AS+ N N+  I+LDVRNGYEWD+GHF GAQRPDVDCFRSTSFG S+SE+I SDPL
Sbjct: 212 NKIDDASNENSNANCILLDVRNGYEWDVGHFRGAQRPDVDCFRSTSFGQSQSEVIVSDPL 271

Query: 697 ANVDKEK 717
           ANVDKEK
Sbjct: 272 ANVDKEK 278


>ref|XP_002329728.1| predicted protein [Populus trichocarpa] gi|222870636|gb|EEF07767.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score =  280 bits (715), Expect = 3e-73
 Identities = 143/205 (69%), Positives = 159/205 (77%), Gaps = 24/205 (11%)
 Frame = +1

Query: 175 RFVFIQDPHELVSTHLSFLKGLDIRGRIYLNEQGINAQFSGPSVDALMYLEWIKEDSRFS 354
           RFVFI DPHE V+ HLSFLKGLDI GRIY+NEQGINAQ+SGPS DAL Y+EW++ED RFS
Sbjct: 97  RFVFINDPHEEVAKHLSFLKGLDIHGRIYVNEQGINAQYSGPSKDALAYVEWLREDFRFS 156

Query: 355 DILAQISPSVNGHSFPRLKLRYKPSLVQLEGGISHLPLLDPSMRATPLAPSEWRNRLQAA 534
           DIL QISP++NGH+FP+LKLRYKPSLVQLEGGISHLPLLDP+MRATPLAPSEWR RL+  
Sbjct: 157 DILVQISPALNGHAFPKLKLRYKPSLVQLEGGISHLPLLDPTMRATPLAPSEWRKRLKEV 216

Query: 535 SSLNLNSKAIVLDVRN-----------------------GYEWDIGHFHGAQRPDVDCFR 645
                +S  +VLDVRN                        YEWDIGHFHGAQRPDVDCFR
Sbjct: 217 H----DSNCVVLDVRNAYVIVPFQVLINAIKLQLFGSEQSYEWDIGHFHGAQRPDVDCFR 272

Query: 646 STSFGLSES-ELIDSDPLANVDKEK 717
           STSFG S+S E I SDPL+NVDKEK
Sbjct: 273 STSFGESDSEEAIASDPLSNVDKEK 297


>ref|XP_003525173.1| PREDICTED: UPF0176 protein pc0378-like isoform 1 [Glycine max]
          Length = 437

 Score =  265 bits (678), Expect = 5e-69
 Identities = 130/188 (69%), Positives = 152/188 (80%), Gaps = 8/188 (4%)
 Frame = +1

Query: 178 FVFIQDPHELVSTHLSFLK--GLDIRGRIYLNEQGINAQFSGPSVDALMYLEWIKEDSRF 351
           FVFIQDP   V  H SFL+  GLDI GR+YLNEQGINAQ+SGPS DA+ Y+ W+++D+RF
Sbjct: 86  FVFIQDPQAEVDKHRSFLQLEGLDINGRLYLNEQGINAQYSGPSKDAMTYVNWLRKDNRF 145

Query: 352 SDILAQISPSVNGHSFPRLKLRYKPSLVQLEGGISHLPLLDPSMRATPLAPSEWRNRLQA 531
           SDIL QISPS  GH+FP LKLRYKPSLVQ EGG+SHL LLDPSMRA PL+PSEWR+RL++
Sbjct: 146 SDILVQISPSEKGHTFPTLKLRYKPSLVQFEGGMSHLSLLDPSMRAIPLSPSEWRDRLES 205

Query: 532 ASSLNLNSK------AIVLDVRNGYEWDIGHFHGAQRPDVDCFRSTSFGLSESELIDSDP 693
            +  +L +K       I+LDVRNGYEWDIGHF GAQRP VDCFR+TSFGLS  E+  SDP
Sbjct: 206 INKTDLTAKDNSNRNYILLDVRNGYEWDIGHFRGAQRPSVDCFRNTSFGLSREEITASDP 265

Query: 694 LANVDKEK 717
           L+NVDKEK
Sbjct: 266 LSNVDKEK 273


>gb|AFK48977.1| unknown [Lotus japonicus]
          Length = 433

 Score =  263 bits (671), Expect = 3e-68
 Identities = 130/188 (69%), Positives = 153/188 (81%), Gaps = 8/188 (4%)
 Frame = +1

Query: 178 FVFIQDPHELVSTHLSFL--KGLDIRGRIYLNEQGINAQFSGPSVDALMYLEWIKEDSRF 351
           FVFI+DP   V  HLSFL  + LDI+GR+YL++QGINAQ+SGPS DAL Y+ W+KED+RF
Sbjct: 84  FVFIKDPRAEVVKHLSFLHLEDLDIKGRVYLSQQGINAQYSGPSKDALAYVNWLKEDNRF 143

Query: 352 SDILAQISPSVNGHSFPRLKLRYKPSLVQLEGGISHLPLLDPSMRATPLAPSEWRNRLQA 531
           SDI+ Q+SPS  GHSFP LKLRYKPSLVQ +GGISHL LLDPSMRA PLAPSEWR RL A
Sbjct: 144 SDIMVQMSPSEKGHSFPTLKLRYKPSLVQFDGGISHLQLLDPSMRAIPLAPSEWRGRLAA 203

Query: 532 ASSLNLNSK------AIVLDVRNGYEWDIGHFHGAQRPDVDCFRSTSFGLSESELIDSDP 693
            +  +L SK       ++LDVRNGYEWDIGHF GAQRP+VDCFRSTSFGL++ ++  SDP
Sbjct: 204 INKNDLTSKDYPNRNYVLLDVRNGYEWDIGHFCGAQRPNVDCFRSTSFGLTKEQITASDP 263

Query: 694 LANVDKEK 717
           L+NVDKEK
Sbjct: 264 LSNVDKEK 271


>ref|XP_003532550.1| PREDICTED: LOW QUALITY PROTEIN: UPF0176 protein pc0378-like
           [Glycine max]
          Length = 436

 Score =  259 bits (661), Expect = 5e-67
 Identities = 127/188 (67%), Positives = 151/188 (80%), Gaps = 8/188 (4%)
 Frame = +1

Query: 178 FVFIQDPHELVSTHLSFLK--GLDIRGRIYLNEQGINAQFSGPSVDALMYLEWIKEDSRF 351
           FVFIQDP   V+ H SFL+  GLDI GR+YLNEQGINAQ+SGPS DA+ Y+ W+++D+RF
Sbjct: 85  FVFIQDPQAEVAKHRSFLELEGLDINGRVYLNEQGINAQYSGPSKDAMAYVNWLRKDNRF 144

Query: 352 SDILAQISPSVNGHSFPRLKLRYKPSLVQLEGGISHLPLLDPSMRATPLAPSEWRNRLQA 531
           S+IL QISPS  GH+FP LKLRYK SLVQ EGG+SHL  LDPSMRA  L+PSEWR+RL+A
Sbjct: 145 SNILVQISPSEKGHTFPILKLRYKSSLVQFEGGMSHLSFLDPSMRAMXLSPSEWRDRLEA 204

Query: 532 ASSLNL------NSKAIVLDVRNGYEWDIGHFHGAQRPDVDCFRSTSFGLSESELIDSDP 693
            +  +L      N   I+LDVRNGYEWDIGHFHGAQRP VDCFR+TSFGLS+ E+  SDP
Sbjct: 205 INKTDLTGKDNPNRNYILLDVRNGYEWDIGHFHGAQRPSVDCFRNTSFGLSQEEITASDP 264

Query: 694 LANVDKEK 717
           L+NVD+EK
Sbjct: 265 LSNVDEEK 272


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