BLASTX nr result

ID: Coptis23_contig00025441 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025441
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002334808.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
dbj|BAF73933.1| beta-pinene synthase [Citrus jambhiri]                 86   4e-15
gb|AAM53945.1|AF514288_1 (-)-beta-pinene synthase [Citrus limon]       85   5e-15
ref|XP_002298717.1| predicted protein [Populus trichocarpa] gi|2...    85   7e-15
ref|XP_002298716.1| predicted protein [Populus trichocarpa] gi|2...    85   7e-15

>ref|XP_002334808.1| predicted protein [Populus trichocarpa] gi|222874896|gb|EEF12027.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 43/90 (47%), Positives = 58/90 (64%)
 Frame = -1

Query: 270 CPAITKTCEPLVVRRSANYQPSIWDFDFIQSLKSEYMGKMWESEAKKLNENVRSTIFNNS 91
           C   T+TC+  + RRS NY    WD  F+QSL SEY+G+ +  +A KL E VR  +    
Sbjct: 6   CMVATETCDQSIARRSGNYPTPFWDHKFLQSLTSEYVGEPYTGQANKLKETVRDMLEKPL 65

Query: 90  GAVGVLYRLDMIDNLCRLGLSYHFEEEIKN 1
            AV   Y+L++IDNL RLG++YHFE EIK+
Sbjct: 66  DAV---YQLELIDNLQRLGVAYHFELEIKS 92


>dbj|BAF73933.1| beta-pinene synthase [Citrus jambhiri]
          Length = 602

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 43/95 (45%), Positives = 66/95 (69%), Gaps = 5/95 (5%)
 Frame = -1

Query: 273 HCPAITKTCEPL---VVRRSANYQPSIWDFDFIQSLKSEYMGKMWESEAKKLNENVRSTI 103
           H  A T   +P+   ++RRSA+Y P+IW FD+IQSL S+Y G+ +  +++KL E V + +
Sbjct: 39  HVAASTTPIKPVDQTIIRRSADYGPTIWSFDYIQSLDSKYKGESYARQSEKLKEQVSAML 98

Query: 102 FNNSGAVGV--LYRLDMIDNLCRLGLSYHFEEEIK 4
             +   V +  L++L++IDNL RLG+SYHFE+EIK
Sbjct: 99  QQDDKVVDLDPLHQLELIDNLHRLGVSYHFEDEIK 133


>gb|AAM53945.1|AF514288_1 (-)-beta-pinene synthase [Citrus limon]
          Length = 602

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 43/95 (45%), Positives = 66/95 (69%), Gaps = 5/95 (5%)
 Frame = -1

Query: 273 HCPAITKTCEPL---VVRRSANYQPSIWDFDFIQSLKSEYMGKMWESEAKKLNENVRSTI 103
           H  A T   +P+   ++RRSA+Y P+IW FD+IQSL S+Y G+ +  + +KL E V + +
Sbjct: 39  HVAASTTPIKPVDQTIIRRSADYGPTIWSFDYIQSLDSKYKGESYARQLEKLKEQVSAML 98

Query: 102 FNNSGAVGV--LYRLDMIDNLCRLGLSYHFEEEIK 4
             ++  V +  L++L++IDNL RLG+SYHFE+EIK
Sbjct: 99  QQDNKVVDLDTLHQLELIDNLHRLGVSYHFEDEIK 133


>ref|XP_002298717.1| predicted protein [Populus trichocarpa] gi|222845975|gb|EEE83522.1|
           predicted protein [Populus trichocarpa]
          Length = 555

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 42/86 (48%), Positives = 57/86 (66%)
 Frame = -1

Query: 258 TKTCEPLVVRRSANYQPSIWDFDFIQSLKSEYMGKMWESEAKKLNENVRSTIFNNSGAVG 79
           T+TC+  + RRS NY    WD  F+QSL SEY+G+ +  +A KL E VR  +     AV 
Sbjct: 4   TETCDQSIARRSGNYPTPFWDHKFLQSLTSEYVGEPYTGQANKLKETVRDMLEKPLDAV- 62

Query: 78  VLYRLDMIDNLCRLGLSYHFEEEIKN 1
             Y+L++IDNL RLG++YHFE EIK+
Sbjct: 63  --YQLELIDNLQRLGVAYHFELEIKS 86


>ref|XP_002298716.1| predicted protein [Populus trichocarpa] gi|222845974|gb|EEE83521.1|
           predicted protein [Populus trichocarpa]
          Length = 325

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 42/86 (48%), Positives = 57/86 (66%)
 Frame = -1

Query: 258 TKTCEPLVVRRSANYQPSIWDFDFIQSLKSEYMGKMWESEAKKLNENVRSTIFNNSGAVG 79
           T+TC+  + RRS NY    WD  F+QSL SEY+G+ +  +A KL E VR  +     AV 
Sbjct: 4   TETCDQSIARRSGNYPTPFWDHKFLQSLTSEYVGEPYTGQANKLKETVRDMLEKPLDAV- 62

Query: 78  VLYRLDMIDNLCRLGLSYHFEEEIKN 1
             Y+L++IDNL RLG++YHFE EIK+
Sbjct: 63  --YQLELIDNLQRLGVAYHFELEIKS 86


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