BLASTX nr result

ID: Coptis23_contig00025431 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025431
         (854 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262758.1| PREDICTED: uncharacterized protein LOC100257...   385   e-105
emb|CAN83078.1| hypothetical protein VITISV_035882 [Vitis vinifera]   384   e-104
dbj|BAJ34456.1| unnamed protein product [Thellungiella halophila]     349   5e-94
ref|XP_002515385.1| lipid binding protein, putative [Ricinus com...   347   2e-93
ref|XP_002324934.1| predicted protein [Populus trichocarpa] gi|2...   347   2e-93

>ref|XP_002262758.1| PREDICTED: uncharacterized protein LOC100257058 isoform 1 [Vitis
           vinifera]
          Length = 305

 Score =  385 bits (988), Expect = e-105
 Identities = 189/265 (71%), Positives = 219/265 (82%)
 Frame = -1

Query: 854 GSLKHVDLLTGSNGWASPPGDLFTLRSKNFLTKNKQKTPSGEWLLKPAGVDWLRSVNKLD 675
           GSL+HVDL  GSNGWASPPGDLF+LRSKN+ T+ KQK+PSG+WLLKPAG DWLRS +KLD
Sbjct: 31  GSLRHVDLHHGSNGWASPPGDLFSLRSKNYFTR-KQKSPSGDWLLKPAGFDWLRSTSKLD 89

Query: 674 NILARPDNRIQNSLNKAHKLGKNLKTFIFAVNLQVPGRDNHSAVFYYSTDEPIPVDSLFY 495
           N+LARPDNR+ ++L KA  L ++ K FIFAVN+QVPGR++HSAVFY++T++PIP  SLFY
Sbjct: 90  NVLARPDNRVAHALRKAQSLNRSQKAFIFAVNIQVPGREHHSAVFYFATEDPIPPGSLFY 149

Query: 494 RFIHGDDNFRNQRFKIVNRIVKGPWIVKAAVGNHAACLLGKALTCNYYRGDNYLEIDVDI 315
           RFIHGDD FRNQRFKIVNRIVKGPWIVKAAVGN+AACLLGKALTC+Y+RG NYLEIDVDI
Sbjct: 150 RFIHGDDAFRNQRFKIVNRIVKGPWIVKAAVGNYAACLLGKALTCSYHRGSNYLEIDVDI 209

Query: 314 GSSTIASAILHLALKYVTAVSIDMGFLIEAVNEEELPERLLGAVRIAHMEMTXXXXXXXX 135
           GSS IA+AIL LAL YVTAV+IDMGFL+EA  EEELPE+LLGAVR+  MEM+        
Sbjct: 210 GSSAIANAILRLALGYVTAVNIDMGFLVEAQAEEELPEKLLGAVRVCQMEMSSATFVEAS 269

Query: 134 XXXXXXXXXGKLAAARGLGLSKVNH 60
                        + RGLGLSKVNH
Sbjct: 270 PSPENATGPVAAVSKRGLGLSKVNH 294


>emb|CAN83078.1| hypothetical protein VITISV_035882 [Vitis vinifera]
          Length = 305

 Score =  384 bits (986), Expect = e-104
 Identities = 188/265 (70%), Positives = 219/265 (82%)
 Frame = -1

Query: 854 GSLKHVDLLTGSNGWASPPGDLFTLRSKNFLTKNKQKTPSGEWLLKPAGVDWLRSVNKLD 675
           GSL+HVDL  GSNGWASPPGDLF+LRSKN+ T+ KQK+PSG+WLLKPAG DWLRS +KLD
Sbjct: 31  GSLRHVDLHHGSNGWASPPGDLFSLRSKNYFTR-KQKSPSGDWLLKPAGFDWLRSTSKLD 89

Query: 674 NILARPDNRIQNSLNKAHKLGKNLKTFIFAVNLQVPGRDNHSAVFYYSTDEPIPVDSLFY 495
           N+LARPDNR+ ++L KA  L ++ K FIFAVN+QVPGR++HSAVFY++T++PIP  SLFY
Sbjct: 90  NVLARPDNRVAHALRKAQSLNRSQKAFIFAVNIQVPGREHHSAVFYFATEDPIPPGSLFY 149

Query: 494 RFIHGDDNFRNQRFKIVNRIVKGPWIVKAAVGNHAACLLGKALTCNYYRGDNYLEIDVDI 315
           RFIHGDD FRNQRFKIVNRIVKGPWIVKAAVGN+AACLLGKALTC+Y+RG NYLEI+VDI
Sbjct: 150 RFIHGDDAFRNQRFKIVNRIVKGPWIVKAAVGNYAACLLGKALTCSYHRGSNYLEIBVDI 209

Query: 314 GSSTIASAILHLALKYVTAVSIDMGFLIEAVNEEELPERLLGAVRIAHMEMTXXXXXXXX 135
           GSS IA+AIL LAL YVTAV+IDMGFL+EA  EEELPE+LLGAVR+  MEM+        
Sbjct: 210 GSSAIANAILRLALGYVTAVNIDMGFLVEAQAEEELPEKLLGAVRVCQMEMSSATFVEAS 269

Query: 134 XXXXXXXXXGKLAAARGLGLSKVNH 60
                        + RGLGLSKVNH
Sbjct: 270 PSPENATGPVAAVSKRGLGLSKVNH 294


>dbj|BAJ34456.1| unnamed protein product [Thellungiella halophila]
          Length = 301

 Score =  349 bits (895), Expect = 5e-94
 Identities = 166/232 (71%), Positives = 206/232 (88%)
 Frame = -1

Query: 854 GSLKHVDLLTGSNGWASPPGDLFTLRSKNFLTKNKQKTPSGEWLLKPAGVDWLRSVNKLD 675
           GSL+ V+  TG++GWASPPGD+F+LRS ++LTK KQK+P+G++LL PAG+DWL+S  KLD
Sbjct: 38  GSLRRVNPDTGTDGWASPPGDVFSLRSNSYLTK-KQKSPAGDYLLSPAGMDWLKSSAKLD 96

Query: 674 NILARPDNRIQNSLNKAHKLGKNLKTFIFAVNLQVPGRDNHSAVFYYSTDEPIPVDSLFY 495
           N+LARPDNR+ ++L KAH  G++LK+FIFAVNLQ+PG+D+HSAVFY++T+EPIP  SL +
Sbjct: 97  NVLARPDNRVAHALRKAHSRGQSLKSFIFAVNLQIPGKDHHSAVFYFATEEPIPSGSLLH 156

Query: 494 RFIHGDDNFRNQRFKIVNRIVKGPWIVKAAVGNHAACLLGKALTCNYYRGDNYLEIDVDI 315
           RFI+GDD+FRNQRFKIVNRIVKGPW+VKAAVGN++ACLLGKALTCNY+RG NY EIDVDI
Sbjct: 157 RFINGDDSFRNQRFKIVNRIVKGPWVVKAAVGNYSACLLGKALTCNYHRGPNYFEIDVDI 216

Query: 314 GSSTIASAILHLALKYVTAVSIDMGFLIEAVNEEELPERLLGAVRIAHMEMT 159
            SS IA+AIL LAL YVT+V+IDMGFL EA  EEELPERL+GAVR+  MEM+
Sbjct: 217 SSSAIATAILRLALGYVTSVTIDMGFLAEAQTEEELPERLIGAVRVCQMEMS 268


>ref|XP_002515385.1| lipid binding protein, putative [Ricinus communis]
           gi|223545329|gb|EEF46834.1| lipid binding protein,
           putative [Ricinus communis]
          Length = 309

 Score =  347 bits (891), Expect = 2e-93
 Identities = 172/271 (63%), Positives = 211/271 (77%)
 Frame = -1

Query: 854 GSLKHVDLLTGSNGWASPPGDLFTLRSKNFLTKNKQKTPSGEWLLKPAGVDWLRSVNKLD 675
           GSL+ VDL  GSNGWASPPG+LF+LRSK++ TK ++   SG +LL PAG+DWL+S  KLD
Sbjct: 41  GSLRRVDLENGSNGWASPPGELFSLRSKHYFTKRQKSPASGGYLLTPAGMDWLKSSTKLD 100

Query: 674 NILARPDNRIQNSLNKAHKLGKNLKTFIFAVNLQVPGRDNHSAVFYYSTDEPIPVDSLFY 495
           N+LARPDNR+  +L K+   G +LK+F+FAVNLQVPG++ HSAVFY+ T++PIP  SL Y
Sbjct: 101 NVLARPDNRVSLALKKSQSQGNSLKSFVFAVNLQVPGKEQHSAVFYFVTEDPIPTGSLLY 160

Query: 494 RFIHGDDNFRNQRFKIVNRIVKGPWIVKAAVGNHAACLLGKALTCNYYRGDNYLEIDVDI 315
           RFI+GDD FRNQRFKIVNRIVKGPWIVK  VGN++ACLLGKAL CNY+RG NYLEIDVDI
Sbjct: 161 RFINGDDAFRNQRFKIVNRIVKGPWIVKKTVGNYSACLLGKALNCNYHRGVNYLEIDVDI 220

Query: 314 GSSTIASAILHLALKYVTAVSIDMGFLIEAVNEEELPERLLGAVRIAHMEMTXXXXXXXX 135
           GSS IA+AILHLAL YVT+V+IDMGF++EA  E+ELPE+L+GA+RI  MEM+        
Sbjct: 221 GSSKIATAILHLALGYVTSVTIDMGFVVEAQAEDELPEKLIGAIRICQMEMSSATVVDAP 280

Query: 134 XXXXXXXXXGKLAAARGLGLSKVNHCHGNGN 42
                         ARGLGL+KV H H +G+
Sbjct: 281 SVN---------VVARGLGLAKVKH-HESGD 301


>ref|XP_002324934.1| predicted protein [Populus trichocarpa] gi|222866368|gb|EEF03499.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score =  347 bits (890), Expect = 2e-93
 Identities = 163/232 (70%), Positives = 198/232 (85%)
 Frame = -1

Query: 854 GSLKHVDLLTGSNGWASPPGDLFTLRSKNFLTKNKQKTPSGEWLLKPAGVDWLRSVNKLD 675
           GSL+HVDL TG NGWASPPGDLF+LRSKN+  K KQK+PSG++LL PAG+DWL+S  KLD
Sbjct: 34  GSLRHVDLHTGVNGWASPPGDLFSLRSKNYFIK-KQKSPSGDYLLSPAGMDWLKSSTKLD 92

Query: 674 NILARPDNRIQNSLNKAHKLGKNLKTFIFAVNLQVPGRDNHSAVFYYSTDEPIPVDSLFY 495
           N+LARPDNR+ N+L KA    K+LK+FIFA+NLQVPG+D HSAVFY+++++P+P DSL Y
Sbjct: 93  NVLARPDNRVANALKKAQSQNKSLKSFIFAINLQVPGKDQHSAVFYFASEDPLPSDSLLY 152

Query: 494 RFIHGDDNFRNQRFKIVNRIVKGPWIVKAAVGNHAACLLGKALTCNYYRGDNYLEIDVDI 315
           RFI+GDD FRNQRFKIVNRI KGPW+VK  VGN++ACLLGKAL  NY+RG NY EIDVD+
Sbjct: 153 RFINGDDAFRNQRFKIVNRIEKGPWVVKKTVGNYSACLLGKALNINYHRGGNYFEIDVDV 212

Query: 314 GSSTIASAILHLALKYVTAVSIDMGFLIEAVNEEELPERLLGAVRIAHMEMT 159
           GSS IA+AILHLAL Y   V+IDMGF++EA  EEELPERL+GA+R+  MEM+
Sbjct: 213 GSSKIAAAILHLALGYTAHVTIDMGFVVEAQTEEELPERLIGAIRVCQMEMS 264


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