BLASTX nr result
ID: Coptis23_contig00025412
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00025412 (446 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004138638.1| PREDICTED: uncharacterized protein LOC101215... 126 5e-36 ref|XP_004158505.1| PREDICTED: regulation of nuclear pre-mRNA do... 126 2e-35 ref|XP_002512894.1| conserved hypothetical protein [Ricinus comm... 127 1e-34 ref|XP_002272891.1| PREDICTED: uncharacterized protein LOC100249... 124 2e-34 emb|CBI21316.3| unnamed protein product [Vitis vinifera] 124 2e-34 >ref|XP_004138638.1| PREDICTED: uncharacterized protein LOC101215983 [Cucumis sativus] Length = 528 Score = 126 bits (317), Expect(2) = 5e-36 Identities = 56/65 (86%), Positives = 61/65 (93%) Frame = +1 Query: 250 HWCIFHMNKAKQVVETWAKQFHCSPRDQRLSFLYLANDILQNSRRKGSEFVAEFWKFLPE 429 HWCIFHMNKAKQVVETW KQFHCSPR+QRL++LYLANDILQNSRRKGSEFV EFWK LP+ Sbjct: 29 HWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLPD 88 Query: 430 ALGEV 444 AL +V Sbjct: 89 ALRDV 93 Score = 49.7 bits (117), Expect(2) = 5e-36 Identities = 24/28 (85%), Positives = 26/28 (92%) Frame = +3 Query: 87 MNGTFNPQILVEKLARLNSSQQSIETLS 170 M GTFNPQILV+KLARLN+SQ SIETLS Sbjct: 1 MGGTFNPQILVDKLARLNNSQASIETLS 28 >ref|XP_004158505.1| PREDICTED: regulation of nuclear pre-mRNA domain-containing protein 2-like [Cucumis sativus] Length = 528 Score = 126 bits (317), Expect(2) = 2e-35 Identities = 56/65 (86%), Positives = 61/65 (93%) Frame = +1 Query: 250 HWCIFHMNKAKQVVETWAKQFHCSPRDQRLSFLYLANDILQNSRRKGSEFVAEFWKFLPE 429 HWCIFHMNKAKQVVETW KQFHCSPR+QRL++LYLANDILQNSRRKGSEFV EFWK LP+ Sbjct: 29 HWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLPD 88 Query: 430 ALGEV 444 AL +V Sbjct: 89 ALRDV 93 Score = 47.4 bits (111), Expect(2) = 2e-35 Identities = 22/28 (78%), Positives = 26/28 (92%) Frame = +3 Query: 87 MNGTFNPQILVEKLARLNSSQQSIETLS 170 M GTFNPQILV+KLARLN+SQ SIE++S Sbjct: 1 MGGTFNPQILVDKLARLNNSQASIESIS 28 >ref|XP_002512894.1| conserved hypothetical protein [Ricinus communis] gi|223547905|gb|EEF49397.1| conserved hypothetical protein [Ricinus communis] Length = 522 Score = 127 bits (320), Expect(2) = 1e-34 Identities = 57/65 (87%), Positives = 61/65 (93%) Frame = +1 Query: 250 HWCIFHMNKAKQVVETWAKQFHCSPRDQRLSFLYLANDILQNSRRKGSEFVAEFWKFLPE 429 HWCIFHMNKAKQVVETW +QFHCSPR+QRL+FLYLANDILQNSRRKGSEFV EFWK LPE Sbjct: 29 HWCIFHMNKAKQVVETWDRQFHCSPREQRLAFLYLANDILQNSRRKGSEFVGEFWKVLPE 88 Query: 430 ALGEV 444 AL +V Sbjct: 89 ALRDV 93 Score = 43.9 bits (102), Expect(2) = 1e-34 Identities = 21/28 (75%), Positives = 24/28 (85%) Frame = +3 Query: 87 MNGTFNPQILVEKLARLNSSQQSIETLS 170 M +FNPQIL+EKLA+LN SQ SIETLS Sbjct: 1 MGSSFNPQILMEKLAKLNHSQASIETLS 28 >ref|XP_002272891.1| PREDICTED: uncharacterized protein LOC100249768 [Vitis vinifera] Length = 530 Score = 124 bits (311), Expect(2) = 2e-34 Identities = 55/65 (84%), Positives = 60/65 (92%) Frame = +1 Query: 250 HWCIFHMNKAKQVVETWAKQFHCSPRDQRLSFLYLANDILQNSRRKGSEFVAEFWKFLPE 429 HWCIFHMNKAKQVVETW +QFHCSP +QRL+FLYLANDILQNSRRKGSEFV EFWK LP+ Sbjct: 29 HWCIFHMNKAKQVVETWDRQFHCSPSEQRLAFLYLANDILQNSRRKGSEFVGEFWKVLPD 88 Query: 430 ALGEV 444 AL +V Sbjct: 89 ALRDV 93 Score = 46.6 bits (109), Expect(2) = 2e-34 Identities = 22/28 (78%), Positives = 25/28 (89%) Frame = +3 Query: 87 MNGTFNPQILVEKLARLNSSQQSIETLS 170 M TFNP IL+EKL++LNSSQQSIETLS Sbjct: 1 MGSTFNPLILIEKLSKLNSSQQSIETLS 28 >emb|CBI21316.3| unnamed protein product [Vitis vinifera] Length = 499 Score = 124 bits (311), Expect(2) = 2e-34 Identities = 55/65 (84%), Positives = 60/65 (92%) Frame = +1 Query: 250 HWCIFHMNKAKQVVETWAKQFHCSPRDQRLSFLYLANDILQNSRRKGSEFVAEFWKFLPE 429 HWCIFHMNKAKQVVETW +QFHCSP +QRL+FLYLANDILQNSRRKGSEFV EFWK LP+ Sbjct: 29 HWCIFHMNKAKQVVETWDRQFHCSPSEQRLAFLYLANDILQNSRRKGSEFVGEFWKVLPD 88 Query: 430 ALGEV 444 AL +V Sbjct: 89 ALRDV 93 Score = 46.6 bits (109), Expect(2) = 2e-34 Identities = 22/28 (78%), Positives = 25/28 (89%) Frame = +3 Query: 87 MNGTFNPQILVEKLARLNSSQQSIETLS 170 M TFNP IL+EKL++LNSSQQSIETLS Sbjct: 1 MGSTFNPLILIEKLSKLNSSQQSIETLS 28