BLASTX nr result

ID: Coptis23_contig00025412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025412
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138638.1| PREDICTED: uncharacterized protein LOC101215...   126   5e-36
ref|XP_004158505.1| PREDICTED: regulation of nuclear pre-mRNA do...   126   2e-35
ref|XP_002512894.1| conserved hypothetical protein [Ricinus comm...   127   1e-34
ref|XP_002272891.1| PREDICTED: uncharacterized protein LOC100249...   124   2e-34
emb|CBI21316.3| unnamed protein product [Vitis vinifera]              124   2e-34

>ref|XP_004138638.1| PREDICTED: uncharacterized protein LOC101215983 [Cucumis sativus]
          Length = 528

 Score =  126 bits (317), Expect(2) = 5e-36
 Identities = 56/65 (86%), Positives = 61/65 (93%)
 Frame = +1

Query: 250 HWCIFHMNKAKQVVETWAKQFHCSPRDQRLSFLYLANDILQNSRRKGSEFVAEFWKFLPE 429
           HWCIFHMNKAKQVVETW KQFHCSPR+QRL++LYLANDILQNSRRKGSEFV EFWK LP+
Sbjct: 29  HWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLPD 88

Query: 430 ALGEV 444
           AL +V
Sbjct: 89  ALRDV 93



 Score = 49.7 bits (117), Expect(2) = 5e-36
 Identities = 24/28 (85%), Positives = 26/28 (92%)
 Frame = +3

Query: 87  MNGTFNPQILVEKLARLNSSQQSIETLS 170
           M GTFNPQILV+KLARLN+SQ SIETLS
Sbjct: 1   MGGTFNPQILVDKLARLNNSQASIETLS 28


>ref|XP_004158505.1| PREDICTED: regulation of nuclear pre-mRNA domain-containing protein
           2-like [Cucumis sativus]
          Length = 528

 Score =  126 bits (317), Expect(2) = 2e-35
 Identities = 56/65 (86%), Positives = 61/65 (93%)
 Frame = +1

Query: 250 HWCIFHMNKAKQVVETWAKQFHCSPRDQRLSFLYLANDILQNSRRKGSEFVAEFWKFLPE 429
           HWCIFHMNKAKQVVETW KQFHCSPR+QRL++LYLANDILQNSRRKGSEFV EFWK LP+
Sbjct: 29  HWCIFHMNKAKQVVETWDKQFHCSPREQRLAYLYLANDILQNSRRKGSEFVGEFWKVLPD 88

Query: 430 ALGEV 444
           AL +V
Sbjct: 89  ALRDV 93



 Score = 47.4 bits (111), Expect(2) = 2e-35
 Identities = 22/28 (78%), Positives = 26/28 (92%)
 Frame = +3

Query: 87  MNGTFNPQILVEKLARLNSSQQSIETLS 170
           M GTFNPQILV+KLARLN+SQ SIE++S
Sbjct: 1   MGGTFNPQILVDKLARLNNSQASIESIS 28


>ref|XP_002512894.1| conserved hypothetical protein [Ricinus communis]
           gi|223547905|gb|EEF49397.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 522

 Score =  127 bits (320), Expect(2) = 1e-34
 Identities = 57/65 (87%), Positives = 61/65 (93%)
 Frame = +1

Query: 250 HWCIFHMNKAKQVVETWAKQFHCSPRDQRLSFLYLANDILQNSRRKGSEFVAEFWKFLPE 429
           HWCIFHMNKAKQVVETW +QFHCSPR+QRL+FLYLANDILQNSRRKGSEFV EFWK LPE
Sbjct: 29  HWCIFHMNKAKQVVETWDRQFHCSPREQRLAFLYLANDILQNSRRKGSEFVGEFWKVLPE 88

Query: 430 ALGEV 444
           AL +V
Sbjct: 89  ALRDV 93



 Score = 43.9 bits (102), Expect(2) = 1e-34
 Identities = 21/28 (75%), Positives = 24/28 (85%)
 Frame = +3

Query: 87  MNGTFNPQILVEKLARLNSSQQSIETLS 170
           M  +FNPQIL+EKLA+LN SQ SIETLS
Sbjct: 1   MGSSFNPQILMEKLAKLNHSQASIETLS 28


>ref|XP_002272891.1| PREDICTED: uncharacterized protein LOC100249768 [Vitis vinifera]
          Length = 530

 Score =  124 bits (311), Expect(2) = 2e-34
 Identities = 55/65 (84%), Positives = 60/65 (92%)
 Frame = +1

Query: 250 HWCIFHMNKAKQVVETWAKQFHCSPRDQRLSFLYLANDILQNSRRKGSEFVAEFWKFLPE 429
           HWCIFHMNKAKQVVETW +QFHCSP +QRL+FLYLANDILQNSRRKGSEFV EFWK LP+
Sbjct: 29  HWCIFHMNKAKQVVETWDRQFHCSPSEQRLAFLYLANDILQNSRRKGSEFVGEFWKVLPD 88

Query: 430 ALGEV 444
           AL +V
Sbjct: 89  ALRDV 93



 Score = 46.6 bits (109), Expect(2) = 2e-34
 Identities = 22/28 (78%), Positives = 25/28 (89%)
 Frame = +3

Query: 87  MNGTFNPQILVEKLARLNSSQQSIETLS 170
           M  TFNP IL+EKL++LNSSQQSIETLS
Sbjct: 1   MGSTFNPLILIEKLSKLNSSQQSIETLS 28


>emb|CBI21316.3| unnamed protein product [Vitis vinifera]
          Length = 499

 Score =  124 bits (311), Expect(2) = 2e-34
 Identities = 55/65 (84%), Positives = 60/65 (92%)
 Frame = +1

Query: 250 HWCIFHMNKAKQVVETWAKQFHCSPRDQRLSFLYLANDILQNSRRKGSEFVAEFWKFLPE 429
           HWCIFHMNKAKQVVETW +QFHCSP +QRL+FLYLANDILQNSRRKGSEFV EFWK LP+
Sbjct: 29  HWCIFHMNKAKQVVETWDRQFHCSPSEQRLAFLYLANDILQNSRRKGSEFVGEFWKVLPD 88

Query: 430 ALGEV 444
           AL +V
Sbjct: 89  ALRDV 93



 Score = 46.6 bits (109), Expect(2) = 2e-34
 Identities = 22/28 (78%), Positives = 25/28 (89%)
 Frame = +3

Query: 87  MNGTFNPQILVEKLARLNSSQQSIETLS 170
           M  TFNP IL+EKL++LNSSQQSIETLS
Sbjct: 1   MGSTFNPLILIEKLSKLNSSQQSIETLS 28


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