BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025409
         (631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330082.1| predicted protein [Populus trichocarpa] gi|2...   279   3e-73
ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containi...   271   7e-71
ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containi...   270   1e-70
emb|CBI39605.3| unnamed protein product [Vitis vinifera]              268   6e-70
ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containi...   268   6e-70

>ref|XP_002330082.1| predicted protein [Populus trichocarpa] gi|222871507|gb|EEF08638.1|
            predicted protein [Populus trichocarpa]
          Length = 665

 Score =  279 bits (713), Expect = 3e-73
 Identities = 132/206 (64%), Positives = 160/206 (77%)
 Frame = +2

Query: 14   MPMKSNAAVWGALLGACRIHGNXXXXXXXXXXXXXXDPQNSGRYALLSNIYAKAGRWDEL 193
            MPM+ +AAVWGALLGACR HG+              +PQNSGRYALLSNIYA+AGRWD++
Sbjct: 456  MPMEPSAAVWGALLGACRKHGDVELGERVGKILLELEPQNSGRYALLSNIYARAGRWDDV 515

Query: 194  AQVRKLMKEMGIKTTPGSSSIDLDGVLHRFVMGDGSHSQMKEVYLMLEEILERLRSEGYV 373
            A VRKLMKE G+KT+ G S ID DGV+H F MGDGSH QMK +YLML+ +++RL+ EG+ 
Sbjct: 516  ANVRKLMKERGVKTSTGISMIDFDGVVHEFKMGDGSHPQMKNIYLMLKNMIKRLKMEGFS 575

Query: 374  PNTTLVLFDIVKEEKETALCYHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFI 553
            PNT+ VLFDI +EEKE  L YHSEKLAIAFGLI+T   TT+ ++KNLR+C DCHSA K I
Sbjct: 576  PNTSQVLFDIEEEEKEAELQYHSEKLAIAFGLINTKPGTTIHVVKNLRMCEDCHSAFKLI 635

Query: 554  SKVVGREIVVRDTTRFHHFKDGSCSC 631
            S+V  REI+VRD  R+HHFK G+CSC
Sbjct: 636  SQVYDREIIVRDRARYHHFKTGTCSC 661


>ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910-like
            [Cucumis sativus]
          Length = 666

 Score =  271 bits (693), Expect = 7e-71
 Identities = 131/209 (62%), Positives = 160/209 (76%)
 Frame = +2

Query: 5    IRFMPMKSNAAVWGALLGACRIHGNXXXXXXXXXXXXXXDPQNSGRYALLSNIYAKAGRW 184
            I  MPMK NAAVWGALLGACRIHGN              +PQNSGRY LLSNIYAK GR+
Sbjct: 454  INSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRF 513

Query: 185  DELAQVRKLMKEMGIKTTPGSSSIDLDGVLHRFVMGDGSHSQMKEVYLMLEEILERLRSE 364
            D+++++RKLMK+ GIKT PG S +DL+G +H F MGDGSH QMKE+Y  L+ I ERL+  
Sbjct: 514  DDVSKIRKLMKDRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQMA 573

Query: 365  GYVPNTTLVLFDIVKEEKETALCYHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAI 544
            G+ P+T+ VLFDI +EEKETA+ YHSEKLAIAFGLI+T     + I+KNLRVC+DCHSA 
Sbjct: 574  GHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIVKNLRVCDDCHSAT 633

Query: 545  KFISKVVGREIVVRDTTRFHHFKDGSCSC 631
            K IS++  REI+VRD  R+HHFK+G+CSC
Sbjct: 634  KLISQIFDREIIVRDRVRYHHFKNGTCSC 662


>ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910-like
            [Cucumis sativus]
          Length = 666

 Score =  270 bits (691), Expect = 1e-70
 Identities = 131/209 (62%), Positives = 159/209 (76%)
 Frame = +2

Query: 5    IRFMPMKSNAAVWGALLGACRIHGNXXXXXXXXXXXXXXDPQNSGRYALLSNIYAKAGRW 184
            I  MPMK NAAVWGALLGACRIHGN              +PQNSGRY LLSNIYAK GR+
Sbjct: 454  INSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRF 513

Query: 185  DELAQVRKLMKEMGIKTTPGSSSIDLDGVLHRFVMGDGSHSQMKEVYLMLEEILERLRSE 364
            D+++++RKLMK  GIKT PG S +DL+G +H F MGDGSH QMKE+Y  L+ I ERL+  
Sbjct: 514  DDVSKIRKLMKNRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQMA 573

Query: 365  GYVPNTTLVLFDIVKEEKETALCYHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAI 544
            G+ P+T+ VLFDI +EEKETA+ YHSEKLAIAFGLI+T     + I+KNLRVC+DCHSA 
Sbjct: 574  GHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIVKNLRVCDDCHSAT 633

Query: 545  KFISKVVGREIVVRDTTRFHHFKDGSCSC 631
            K IS++  REI+VRD  R+HHFK+G+CSC
Sbjct: 634  KLISQIFDREIIVRDRVRYHHFKNGTCSC 662


>emb|CBI39605.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score =  268 bits (685), Expect = 6e-70
 Identities = 129/207 (62%), Positives = 160/207 (77%), Gaps = 1/207 (0%)
 Frame = +2

Query: 14   MPMKSNAAVWGALLGACRIHGNXXXXXXXXXXXXXXDPQNSGRYALLSNIYAKAGRWDEL 193
            +P +   AVWGALLGACR HGN              +PQNSGRY LLSNIYAKAGRW+E+
Sbjct: 414  IPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEV 473

Query: 194  AQVRKLMKEMGIKTTPGSSSIDLD-GVLHRFVMGDGSHSQMKEVYLMLEEILERLRSEGY 370
             +VRKLMKE GIKTTPG+S IDL  G +H+F++GDGSH Q+K++Y ML+++ ERL+ EGY
Sbjct: 474  GEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGY 533

Query: 371  VPNTTLVLFDIVKEEKETALCYHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKF 550
             P+ + VLFDI +EEKETA+  HSEKLAI FGLI+T   TT+RI+KNLRVC DCHSA K 
Sbjct: 534  EPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKL 593

Query: 551  ISKVVGREIVVRDTTRFHHFKDGSCSC 631
            IS+V  REI+VRD  R+HHF++G+CSC
Sbjct: 594  ISQVYNREIIVRDRIRYHHFRNGACSC 620


>ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
            isoform 1 [Vitis vinifera]
          Length = 672

 Score =  268 bits (685), Expect = 6e-70
 Identities = 129/207 (62%), Positives = 160/207 (77%), Gaps = 1/207 (0%)
 Frame = +2

Query: 14   MPMKSNAAVWGALLGACRIHGNXXXXXXXXXXXXXXDPQNSGRYALLSNIYAKAGRWDEL 193
            +P +   AVWGALLGACR HGN              +PQNSGRY LLSNIYAKAGRW+E+
Sbjct: 462  IPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEV 521

Query: 194  AQVRKLMKEMGIKTTPGSSSIDLD-GVLHRFVMGDGSHSQMKEVYLMLEEILERLRSEGY 370
             +VRKLMKE GIKTTPG+S IDL  G +H+F++GDGSH Q+K++Y ML+++ ERL+ EGY
Sbjct: 522  GEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGY 581

Query: 371  VPNTTLVLFDIVKEEKETALCYHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKF 550
             P+ + VLFDI +EEKETA+  HSEKLAI FGLI+T   TT+RI+KNLRVC DCHSA K 
Sbjct: 582  EPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKL 641

Query: 551  ISKVVGREIVVRDTTRFHHFKDGSCSC 631
            IS+V  REI+VRD  R+HHF++G+CSC
Sbjct: 642  ISQVYNREIIVRDRIRYHHFRNGACSC 668