BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025407
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32560.3| unnamed protein product [Vitis vinifera]              130   1e-28
ref|XP_003631603.1| PREDICTED: putative pentatricopeptide repeat...   130   1e-28
ref|XP_004159175.1| PREDICTED: putative pentatricopeptide repeat...   127   9e-28
ref|XP_004148310.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   127   9e-28
ref|XP_002519085.1| pentatricopeptide repeat-containing protein,...   121   5e-26

>emb|CBI32560.3| unnamed protein product [Vitis vinifera]
          Length = 553

 Score =  130 bits (326), Expect = 1e-28
 Identities = 61/101 (60%), Positives = 81/101 (80%)
 Frame = +2

Query: 2   SGYVRLRNCDAVFELFLDFNTTKIQVPDALILINVLGGCAIQAALHPGKQIHTYMVRMGI 181
           +GYV+ + C+AVFEL  +F   +  VPDALILI+VLG CAIQAAL+PGKQIH Y++R+GI
Sbjct: 362 TGYVKSQQCEAVFELLSEFRVKEAMVPDALILISVLGACAIQAALNPGKQIHAYVLRIGI 421

Query: 182 KLDERLRSSLADMYAKCGEIEYAERIFKRAPCRDRVMYNSM 304
           +LDE+L S++ DMY+K G I+YAE+IF+R   RD V+YN M
Sbjct: 422 ELDEKLVSAMVDMYSKSGNIKYAEKIFQRVTNRDAVIYNIM 462


>ref|XP_003631603.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g18840-like [Vitis vinifera]
          Length = 670

 Score =  130 bits (326), Expect = 1e-28
 Identities = 61/101 (60%), Positives = 81/101 (80%)
 Frame = +2

Query: 2   SGYVRLRNCDAVFELFLDFNTTKIQVPDALILINVLGGCAIQAALHPGKQIHTYMVRMGI 181
           +GYV+ + C+AVFEL  +F   +  VPDALILI+VLG CAIQAAL+PGKQIH Y++R+GI
Sbjct: 362 TGYVKSQQCEAVFELLSEFRVKEAMVPDALILISVLGACAIQAALNPGKQIHAYVLRIGI 421

Query: 182 KLDERLRSSLADMYAKCGEIEYAERIFKRAPCRDRVMYNSM 304
           +LDE+L S++ DMY+K G I+YAE+IF+R   RD V+YN M
Sbjct: 422 ELDEKLVSAMVDMYSKSGNIKYAEKIFQRVTNRDAVIYNIM 462


>ref|XP_004159175.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g18840-like [Cucumis sativus]
          Length = 1096

 Score =  127 bits (319), Expect = 9e-28
 Identities = 61/101 (60%), Positives = 79/101 (78%)
 Frame = +2

Query: 5    GYVRLRNCDAVFELFLDFNTTKIQVPDALILINVLGGCAIQAALHPGKQIHTYMVRMGIK 184
            GYV+L+ C+AVFEL  ++   + +VPD LILI+++G CAIQAAL PGKQIH+YM+R GIK
Sbjct: 786  GYVKLQQCEAVFELLSEYRK-EAKVPDVLILISIIGACAIQAALVPGKQIHSYMLRAGIK 844

Query: 185  LDERLRSSLADMYAKCGEIEYAERIFKRAPCRDRVMYNSMI 307
            LD +L SSL DMY+KCG I YAERIF+    +D ++YN MI
Sbjct: 845  LDTKLTSSLVDMYSKCGSIIYAERIFREVTDKDSIIYNIMI 885


>ref|XP_004148310.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At3g18840-like [Cucumis
            sativus]
          Length = 1096

 Score =  127 bits (319), Expect = 9e-28
 Identities = 61/101 (60%), Positives = 79/101 (78%)
 Frame = +2

Query: 5    GYVRLRNCDAVFELFLDFNTTKIQVPDALILINVLGGCAIQAALHPGKQIHTYMVRMGIK 184
            GYV+L+ C+AVFEL  ++   + +VPD LILI+++G CAIQAAL PGKQIH+YM+R GIK
Sbjct: 786  GYVKLQQCEAVFELLSEYRK-EAKVPDVLILISIIGACAIQAALVPGKQIHSYMLRAGIK 844

Query: 185  LDERLRSSLADMYAKCGEIEYAERIFKRAPCRDRVMYNSMI 307
            LD +L SSL DMY+KCG I YAERIF+    +D ++YN MI
Sbjct: 845  LDTKLTSSLVDMYSKCGSIIYAERIFREVTDKDSIIYNIMI 885


>ref|XP_002519085.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223541748|gb|EEF43296.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1157

 Score =  121 bits (304), Expect = 5e-26
 Identities = 52/102 (50%), Positives = 80/102 (78%)
 Frame = +2

Query: 2    SGYVRLRNCDAVFELFLDFNTTKIQVPDALILINVLGGCAIQAALHPGKQIHTYMVRMGI 181
            +GYV+L++C+A+FELF +F + +  VPD+LILI+VLG CA++AAL PGKQIH Y+ RMGI
Sbjct: 836  TGYVKLQHCEAIFELFSEFRSKEAMVPDSLILISVLGACALEAALSPGKQIHGYVFRMGI 895

Query: 182  KLDERLRSSLADMYAKCGEIEYAERIFKRAPCRDRVMYNSMI 307
             +D+++ +++ DMY+K G   YAE++F+    RD ++YN M+
Sbjct: 896  TMDKKMSTAMVDMYSKSGSTAYAEKVFQNVNERDSILYNVMM 937