BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025397
         (812 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...   225   1e-56
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]   214   2e-53
emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]   213   5e-53
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]   201   2e-49
gb|ABW74566.1| integrase [Boechera divaricarpa]                       197   2e-48

>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score =  225 bits (573), Expect = 1e-56
 Identities = 107/212 (50%), Positives = 153/212 (72%), Gaps = 4/212 (1%)
 Frame = +1

Query: 187 YKDYREK-QCNFCNKVGHTEPYCFAKAR--QQEANFTEE-KQEGNLFLTYLLPKDSKNDV 354
           ++ Y+   QC +C K GH E  C+ K +  Q++ANFT+  ++E  LF+      +S N V
Sbjct: 251 FRQYKSNIQCRYCKKFGHKEVDCWTKQKDEQKDANFTQNVEEESKLFMASSQITESANAV 310

Query: 355 WFLDSGCSNHMTGEKTFFRSIDESVKLQVRLGDDKQVQIEGKGSIEVKTKSGIDRLIHDV 534
           WF+DSGCSNHM+  K+ FR +DES K +VRLGDDKQV IEGKG++E+KT  G  + ++DV
Sbjct: 311 WFIDSGCSNHMSSSKSLFRDLDESQKSEVRLGDDKQVHIEGKGTVEIKTVQGNVKFLYDV 370

Query: 535 YYIPGLANNLLSVGQLIQRGFSVLFHDDTCEIRKKQSEKPMFTIPMTKNKMFPLELSCID 714
            Y+P LA+NLLSVGQL+  G+SV+F+D+ C+I+ K+S + +  +PMT+NKMFPL++S + 
Sbjct: 371 QYVPTLAHNLLSVGQLMTSGYSVVFYDNACDIKDKESGRTIARVPMTQNKMFPLDISNVG 430

Query: 715 DFALVAHANDDSRLWHLRYGHLHFNGLKLLSQ 810
           + ALV    +++ LWHLRYGHL+ N LKLL Q
Sbjct: 431 NSALVVKEKNETNLWHLRYGHLNVNWLKLLVQ 462


>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score =  214 bits (544), Expect = 2e-53
 Identities = 109/222 (49%), Positives = 152/222 (68%), Gaps = 6/222 (2%)
 Frame = +1

Query: 163 DRGGY-RQNYKDYREK---QCNFCNKVGHTEPYCFAKARQQ-EANFTEEKQEG-NLFLTY 324
           D  GY RQ+ +  R K   QC +C + GH +  C+ K RQ+ +AN+ E++++   LF+ Y
Sbjct: 236 DAQGYQRQSTEKNRNKSNIQCYYCKRFGHVQXECWKKERQEKQANYVEQEEDQVKLFMXY 295

Query: 325 LLPKDSKNDVWFLDSGCSNHMTGEKTFFRSIDESVKLQVRLGDDKQVQIEGKGSIEVKTK 504
                S N++WFLDSGCSNHMTG K+ F+ +DES KL+V+LGDDKQV +EGKG + V   
Sbjct: 296 NEEVVSSNNIWFLDSGCSNHMTGIKSLFKELDESHKLKVKLGDDKQVXVEGKGIMAVNNG 355

Query: 505 SGIDRLIHDVYYIPGLANNLLSVGQLIQRGFSVLFHDDTCEIRKKQSEKPMFTIPMTKNK 684
            G  +L+++VY+IP L  NLLSVGQL+  G+S+LF   TC I+ K+S++ +  + M  NK
Sbjct: 356 HGNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGATCVIKDKKSDQIIVNVRMAANK 415

Query: 685 MFPLELSCIDDFALVAHANDDSRLWHLRYGHLHFNGLKLLSQ 810
           +FPLE+S I+  ALV     +S LWHLRYGHL+  GLKLLS+
Sbjct: 416 LFPLEVSSIEKHALVVKETSESNLWHLRYGHLNVKGLKLLSK 457


>emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]
          Length = 1109

 Score =  213 bits (541), Expect = 5e-53
 Identities = 105/220 (47%), Positives = 150/220 (68%), Gaps = 5/220 (2%)
 Frame = +1

Query: 166 RGGYRQNYKDYREK---QCNFCNKVGHTEPYCFAKARQQ-EANFTEEKQEG-NLFLTYLL 330
           +G  RQ+ +  R K   QC +C + GH +  C+ K RQ+ +AN+ E++++   LF+ Y  
Sbjct: 224 QGDQRQSTEKSRNKSNIQCYYCKRFGHVQAECWKKERQEKQANYVEQEEDQVKLFMAYNE 283

Query: 331 PKDSKNDVWFLDSGCSNHMTGEKTFFRSIDESVKLQVRLGDDKQVQIEGKGSIEVKTKSG 510
                N++WFLDSGCSNHMTG K+ F+ +DES KL+V+LGDDKQV +EGKG++ V    G
Sbjct: 284 EVVXSNNIWFLDSGCSNHMTGIKSLFKELDESHKLKVKLGDDKQVXVEGKGTVAVNNGHG 343

Query: 511 IDRLIHDVYYIPGLANNLLSVGQLIQRGFSVLFHDDTCEIRKKQSEKPMFTIPMTKNKMF 690
             +L+++VY+IP L  NLLSVGQL+  G+S+LF   TC I+ K+ ++ +  + M  NK+F
Sbjct: 344 NVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGSTCVIKDKKFDQIIVDVRMAANKLF 403

Query: 691 PLELSCIDDFALVAHANDDSRLWHLRYGHLHFNGLKLLSQ 810
           PLE+S I+  ALV     +S LWHLRYGHL+  GLKLLS+
Sbjct: 404 PLEVSSIEKHALVVKETSESNLWHLRYGHLNVKGLKLLSK 443


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score =  201 bits (510), Expect = 2e-49
 Identities = 99/195 (50%), Positives = 138/195 (70%), Gaps = 2/195 (1%)
 Frame = +1

Query: 232 GHTEPYCFAKARQQ-EANFTEEKQEG-NLFLTYLLPKDSKNDVWFLDSGCSNHMTGEKTF 405
           G  +  C+ K RQ+ +AN+ E++++   LF+ Y     S N++WFLDSGCSNHMTG K+ 
Sbjct: 248 GDAQXECWKKERQEKQANYVEQEEDQVKLFMAYNEEVVSSNNIWFLDSGCSNHMTGIKSL 307

Query: 406 FRSIDESVKLQVRLGDDKQVQIEGKGSIEVKTKSGIDRLIHDVYYIPGLANNLLSVGQLI 585
           F+ +DES KL+V+LGDDKQVQ+EGKG+  V    G  +L+++VY+IP L  NLLSVGQL+
Sbjct: 308 FKELDESHKLKVKLGDDKQVQVEGKGTXAVNNGHGNVKLLYNVYFIPSLTQNLLSVGQLM 367

Query: 586 QRGFSVLFHDDTCEIRKKQSEKPMFTIPMTKNKMFPLELSCIDDFALVAHANDDSRLWHL 765
             G+S+LF   TC I+ K+S++ +  + M  NK+FPLE+S I+  ALV     +S LWHL
Sbjct: 368 VSGYSILFDGATCVIKDKKSDQIIVBVRMAANKLFPLEVSSIEKHALVVKETSESNLWHL 427

Query: 766 RYGHLHFNGLKLLSQ 810
           RYGHL+  GLKLLS+
Sbjct: 428 RYGHLNVKGLKLLSK 442


>gb|ABW74566.1| integrase [Boechera divaricarpa]
          Length = 1165

 Score =  197 bits (502), Expect = 2e-48
 Identities = 98/203 (48%), Positives = 145/203 (71%), Gaps = 2/203 (0%)
 Frame = +1

Query: 208 QCNFCNKVGHTEPYCFAKARQQE-ANFTE-EKQEGNLFLTYLLPKDSKNDVWFLDSGCSN 381
           QC++C K GH +  C+ K ++++ A F E E ++  LF+ +   + SK+ VW+LDSGCSN
Sbjct: 97  QCHYCKKYGHMQTNCWKKQKEEKHACFVEQENEQPRLFMAFESEEASKS-VWYLDSGCSN 155

Query: 382 HMTGEKTFFRSIDESVKLQVRLGDDKQVQIEGKGSIEVKTKSGIDRLIHDVYYIPGLANN 561
           HMTG K+ F+ +DES KL+V+LG+DK+VQ+EG+G + V    G  +LI+ VYYIP LA+N
Sbjct: 156 HMTGTKSSFKELDESHKLKVKLGNDKEVQVEGRGVVAVHNGHGNLKLIYGVYYIPDLAHN 215

Query: 562 LLSVGQLIQRGFSVLFHDDTCEIRKKQSEKPMFTIPMTKNKMFPLELSCIDDFALVAHAN 741
           LLSVGQ+++   SVLF  + C I++K+S   +  +  T N ++PLE+S ++  ALVA  +
Sbjct: 216 LLSVGQMVENNCSVLFDGNECVIKEKKSGVTLAMVKKTSNNLYPLEMSSVETKALVAKVS 275

Query: 742 DDSRLWHLRYGHLHFNGLKLLSQ 810
           D S+L HLRYGHLH NGL++L+Q
Sbjct: 276 DISKLLHLRYGHLHENGLRVLNQ 298