BLASTX nr result

ID: Coptis23_contig00025393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025393
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517183.1| conserved hypothetical protein [Ricinus comm...    60   2e-07
ref|XP_002280710.1| PREDICTED: uncharacterized protein LOC100261...    58   7e-07

>ref|XP_002517183.1| conserved hypothetical protein [Ricinus communis]
           gi|223543818|gb|EEF45346.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 453

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/67 (44%), Positives = 45/67 (67%), Gaps = 5/67 (7%)
 Frame = -1

Query: 193 MSYFEVLKKFKR---FEPAS--LAFFVITVFAFLCCFFYLDYRVVVSKGFQYNGQGQQRF 29
           M  FE+ KKFKR   FEP+   L FF++TV   +CCFFY D+R  ++KG++  G+  +R+
Sbjct: 13  MQVFEIFKKFKRLRLFEPSVGVLGFFLVTV-CVICCFFYFDFRDAITKGYKVPGK-SERY 70

Query: 28  LWLGFED 8
           +WL F +
Sbjct: 71  MWLQFNE 77


>ref|XP_002280710.1| PREDICTED: uncharacterized protein LOC100261302 [Vitis vinifera]
           gi|297736996|emb|CBI26197.3| unnamed protein product
           [Vitis vinifera]
          Length = 446

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 5/65 (7%)
 Frame = -1

Query: 193 MSYFEVLKKFKRF---EPAS--LAFFVITVFAFLCCFFYLDYRVVVSKGFQYNGQGQQRF 29
           + +F+V KKFKRF   EP+   L FF +TV + +CCFFYLDYR   +KGF ++ Q  +RF
Sbjct: 13  LPFFDVFKKFKRFRLLEPSVGVLGFFFVTV-SVICCFFYLDYR-AAAKGFLFSSQ-SERF 69

Query: 28  LWLGF 14
           +W  F
Sbjct: 70  MWFRF 74


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