BLASTX nr result

ID: Coptis23_contig00025391 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025391
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266648.1| PREDICTED: phytoene dehydrogenase, chloropla...   179   3e-43
ref|XP_003524753.1| PREDICTED: phytoene dehydrogenase, chloropla...   176   1e-42
ref|XP_002515342.1| amine oxidase, putative [Ricinus communis] g...   176   2e-42
ref|XP_004159642.1| PREDICTED: LOW QUALITY PROTEIN: phytoene deh...   172   3e-41
ref|XP_004136658.1| PREDICTED: 15-cis-phytoene desaturase, chlor...   172   3e-41

>ref|XP_002266648.1| PREDICTED: phytoene dehydrogenase, chloroplastic/chromoplastic
           [Vitis vinifera] gi|296081484|emb|CBI20007.3| unnamed
           protein product [Vitis vinifera]
          Length = 463

 Score =  179 bits (453), Expect = 3e-43
 Identities = 87/111 (78%), Positives = 99/111 (89%)
 Frame = +3

Query: 6   LHSENIPFLLVEASDATGGRVRTDVVDGFTLDRGFQIFITGYPEAKKLLDYEALNLQKFY 185
           LHSENIPFL++EASDA GGRVRTD V GF LDRGFQIFIT YPEAK+LLDY+AL+LQKFY
Sbjct: 58  LHSENIPFLVLEASDAVGGRVRTDPVAGFLLDRGFQIFITAYPEAKRLLDYQALDLQKFY 117

Query: 186 SGAFVYFNGGFHTVADPLRHFSDAIISLTNPIGSVFDKLLIGLTRIRVLSR 338
           +GA VY+ GGFHTVADP+ HF D+I +LTNPIG+V DKLLIGL R+RVLSR
Sbjct: 118 AGARVYYGGGFHTVADPVLHFWDSIQTLTNPIGTVLDKLLIGLARLRVLSR 168


>ref|XP_003524753.1| PREDICTED: phytoene dehydrogenase, chloroplastic/chromoplastic-like
           [Glycine max]
          Length = 476

 Score =  176 bits (447), Expect = 1e-42
 Identities = 85/110 (77%), Positives = 98/110 (89%)
 Frame = +3

Query: 3   HLHSENIPFLLVEASDATGGRVRTDVVDGFTLDRGFQIFITGYPEAKKLLDYEALNLQKF 182
           HL+S+NIPFLL+EASDA GGRVRTD+VDGF LDRGFQIFIT YPEA+KLL+Y++LNLQKF
Sbjct: 66  HLNSQNIPFLLLEASDAVGGRVRTDIVDGFLLDRGFQIFITAYPEAQKLLNYQSLNLQKF 125

Query: 183 YSGAFVYFNGGFHTVADPLRHFSDAIISLTNPIGSVFDKLLIGLTRIRVL 332
           YSGA ++++G FHTVADPLRHF D+  SLTNPIGS  DKLLIG TRIR L
Sbjct: 126 YSGARIFYDGQFHTVADPLRHFWDSARSLTNPIGSPLDKLLIGSTRIRAL 175


>ref|XP_002515342.1| amine oxidase, putative [Ricinus communis]
           gi|223545286|gb|EEF46791.1| amine oxidase, putative
           [Ricinus communis]
          Length = 481

 Score =  176 bits (445), Expect = 2e-42
 Identities = 82/111 (73%), Positives = 100/111 (90%)
 Frame = +3

Query: 6   LHSENIPFLLVEASDATGGRVRTDVVDGFTLDRGFQIFITGYPEAKKLLDYEALNLQKFY 185
           L+SEN+PF+L+EASD  GGRVRTD+VDGF LDRGFQIFIT YPEA+KLLDY+AL+LQ+FY
Sbjct: 71  LNSENVPFILLEASDGVGGRVRTDIVDGFILDRGFQIFITAYPEAQKLLDYQALDLQRFY 130

Query: 186 SGAFVYFNGGFHTVADPLRHFSDAIISLTNPIGSVFDKLLIGLTRIRVLSR 338
           SGA +YF+G F+TVADPLRHF DA+ SLTNPIGS+ DKLLIG TR++ L++
Sbjct: 131 SGAKIYFDGQFYTVADPLRHFWDAVESLTNPIGSILDKLLIGSTRLQALAK 181


>ref|XP_004159642.1| PREDICTED: LOW QUALITY PROTEIN: phytoene dehydrogenase,
           chloroplastic/chromoplastic-like [Cucumis sativus]
          Length = 473

 Score =  172 bits (435), Expect = 3e-41
 Identities = 83/112 (74%), Positives = 97/112 (86%)
 Frame = +3

Query: 3   HLHSENIPFLLVEASDATGGRVRTDVVDGFTLDRGFQIFITGYPEAKKLLDYEALNLQKF 182
           HL S+NIPF+L+EASD  GGRVRTD+VDGF LDRGFQIFIT YPEA+ LL+Y++L LQKF
Sbjct: 60  HLRSKNIPFILLEASDGVGGRVRTDLVDGFLLDRGFQIFITAYPEAQSLLNYQSLRLQKF 119

Query: 183 YSGAFVYFNGGFHTVADPLRHFSDAIISLTNPIGSVFDKLLIGLTRIRVLSR 338
           YSGA VY +  FHTVADPLRHF D++ SL+NPIGSV DKLLIGLTR RVL++
Sbjct: 120 YSGALVYHDRQFHTVADPLRHFIDSLGSLSNPIGSVLDKLLIGLTRARVLAK 171


>ref|XP_004136658.1| PREDICTED: 15-cis-phytoene desaturase,
           chloroplastic/chromoplastic-like [Cucumis sativus]
          Length = 473

 Score =  172 bits (435), Expect = 3e-41
 Identities = 83/112 (74%), Positives = 97/112 (86%)
 Frame = +3

Query: 3   HLHSENIPFLLVEASDATGGRVRTDVVDGFTLDRGFQIFITGYPEAKKLLDYEALNLQKF 182
           HL S+NIPF+L+EASD  GGRVRTD+VDGF LDRGFQIFIT YPEA+ LL+Y++L LQKF
Sbjct: 60  HLRSKNIPFILLEASDGVGGRVRTDLVDGFLLDRGFQIFITAYPEAQSLLNYQSLRLQKF 119

Query: 183 YSGAFVYFNGGFHTVADPLRHFSDAIISLTNPIGSVFDKLLIGLTRIRVLSR 338
           YSGA VY +  FHTVADPLRHF D++ SL+NPIGSV DKLLIGLTR RVL++
Sbjct: 120 YSGALVYHDRQFHTVADPLRHFIDSLGSLSNPIGSVLDKLLIGLTRARVLAK 171


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