BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025372
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN05905.1| reverse transcriptase, related [Medicago truncatula]    64   2e-10
emb|CCA66222.1| hypothetical protein [Beta vulgaris subsp. vulga...    50   7e-09
ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|2...    51   3e-08
ref|XP_003622921.1| hypothetical protein MTR_7g058360 [Medicago ...    54   2e-07
emb|CCA66235.1| hypothetical protein [Beta vulgaris subsp. vulga...    49   3e-07

>gb|ABN05905.1| reverse transcriptase, related [Medicago truncatula]
          Length = 328

 Score = 63.9 bits (154), Expect(2) = 2e-10
 Identities = 30/80 (37%), Positives = 44/80 (55%)
 Frame = -3

Query: 243 KASPPFRFCNFWLLHPNFKQTLSSCWNLPPQGSPPFMLFKKLKNLKCTLKSWSKALFSNM 64
           K S  F+F   W LH N K+ +   W+LP  G P F+L KKL+ L+  LK W+K +F N+
Sbjct: 195 KFSSQFKFLKMWSLHENCKEVIQDSWSLPVIGCPMFVLSKKLQTLEIRLKCWNKEVFGNI 254

Query: 63  SGTIAKLKT*LNEVQMLLQS 4
              +   +  L  VQ  +Q+
Sbjct: 255 HDLVKTTEASLQTVQAQIQT 274



 Score = 26.2 bits (56), Expect(2) = 2e-10
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -1

Query: 365 KIYRCLINVAWTDLKLNTSVEFATQGIFDHTPIVLSF 255
           ++ RC+ N  W D   + +     +   DH PI+L F
Sbjct: 153 RLDRCICNQRWMDFVSSVNCSTLIRNQSDHYPILLYF 189


>emb|CCA66222.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1383

 Score = 50.4 bits (119), Expect(2) = 7e-09
 Identities = 29/68 (42%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
 Frame = -3

Query: 231 PFRFCNFWLLHPNFKQTLSSCW----NLPPQGSPPFMLFKKLKNLKCTLKSWSKALFSNM 64
           PFRF N W+ HPNF  T+S  W    NLP        L  KLK LK  LK W+K+ F  +
Sbjct: 238 PFRFLNCWVSHPNFLPTISLAWANAQNLP--------LPDKLKQLKLKLKEWNKSEFGAI 289

Query: 63  SGTIAKLK 40
              I +L+
Sbjct: 290 DTKIKELE 297



 Score = 34.3 bits (77), Expect(2) = 7e-09
 Identities = 17/56 (30%), Positives = 31/56 (55%)
 Frame = -1

Query: 431 GLYDHSFSGCQYSWTNFDGKFSKIYRCLINVAWTDLKLNTSVEFATQGIFDHTPIV 264
           GL D S +  +++W + + K S++ RCL+   W     N S++   + + DH PI+
Sbjct: 172 GLIDISSANGRFTWFHGNRK-SRLDRCLVTSDWIQQYPNLSLQILNRTVSDHCPIL 226


>ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|222873371|gb|EEF10502.1|
           predicted protein [Populus trichocarpa]
          Length = 819

 Score = 50.8 bits (120), Expect(2) = 3e-08
 Identities = 25/76 (32%), Positives = 40/76 (52%)
 Frame = -3

Query: 231 PFRFCNFWLLHPNFKQTLSSCWNLPPQGSPPFMLFKKLKNLKCTLKSWSKALFSNMSGTI 52
           PFRF + W+ H  F   +   W+   +G P + L  KL+ LK  LK ++ A FSN+S  +
Sbjct: 621 PFRFFDMWMDHDEFMPLVKKVWDQNSRGCPMYQLCCKLRKLKQELKLFNMAHFSNISDRV 680

Query: 51  AKLKT*LNEVQMLLQS 4
              K  +++ Q  L +
Sbjct: 681 RDAKNKMDKAQQALHT 696



 Score = 32.0 bits (71), Expect(2) = 3e-08
 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
 Frame = -1

Query: 422 DHSFSGCQYSWTNFDGK---FSKIYRCLINVAWTDLKLNTS-VEFATQGIFDHTPIVL 261
           D  +SG  Y+W+N   +     K+ R L+N  W +LK   S   F   G+ DH+P+V+
Sbjct: 553 DLRYSGMHYTWSNQCPENLIMRKLDRVLVNEKW-NLKFPLSEARFLPSGMSDHSPMVV 609


>ref|XP_003622921.1| hypothetical protein MTR_7g058360 [Medicago truncatula]
           gi|355497936|gb|AES79139.1| hypothetical protein
           MTR_7g058360 [Medicago truncatula]
          Length = 275

 Score = 53.5 bits (127), Expect(2) = 2e-07
 Identities = 24/55 (43%), Positives = 31/55 (56%)
 Frame = -3

Query: 228 FRFCNFWLLHPNFKQTLSSCWNLPPQGSPPFMLFKKLKNLKCTLKSWSKALFSNM 64
           F+F   W LH N K  ++SCW     G P F+L KKL  LK  L+ W+K  F N+
Sbjct: 127 FKFLKMWSLHDNCKDAIASCWKTTITGCPMFILTKKLLLLKQRLEIWNKETFGNV 181



 Score = 26.2 bits (56), Expect(2) = 2e-07
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -1

Query: 356 RCLINVAWTDLKLNTSVEFATQGIFDHTPIVLSF 255
           R + N AW D+  +TS     +   DH P++L F
Sbjct: 83  RSICNQAWLDMCQSTSCSTLIKTKSDHYPLLLHF 116


>emb|CCA66235.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1380

 Score = 48.5 bits (114), Expect(2) = 3e-07
 Identities = 24/73 (32%), Positives = 39/73 (53%)
 Frame = -3

Query: 231 PFRFCNFWLLHPNFKQTLSSCWNLPPQGSPPFMLFKKLKNLKCTLKSWSKALFSNMSGTI 52
           PF+F N WL  P   + +   W    Q S P  L +KLK +K  LK W++ +F N+   I
Sbjct: 238 PFKFQNCWLSDPRCMRLVKDTW----QKSSPMGLVQKLKTVKKDLKDWNEKVFGNIEANI 293

Query: 51  AKLKT*LNEVQML 13
            +L+  +N++  +
Sbjct: 294 KQLEHEINQLDKI 306



 Score = 30.8 bits (68), Expect(2) = 3e-07
 Identities = 13/48 (27%), Positives = 25/48 (52%)
 Frame = -1

Query: 401 QYSWTNFDGKFSKIYRCLINVAWTDLKLNTSVEFATQGIFDHTPIVLS 258
           +++W   + K SK+ RC +N  W        +    +G+ DH P++L+
Sbjct: 182 RFTWFRGNSK-SKLDRCFVNPEWLTHYPTLKLSLLNRGLSDHCPLLLN 228