BLASTX nr result

ID: Coptis23_contig00025366 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025366
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004156337.1| PREDICTED: auxin response factor 18-like [Cu...   234   5e-60
ref|XP_004143252.1| PREDICTED: auxin response factor 18-like [Cu...   234   5e-60
ref|XP_002281486.1| PREDICTED: auxin response factor 18-like [Vi...   233   9e-60
ref|XP_002519531.1| Auxin response factor, putative [Ricinus com...   232   2e-59
gb|ACI13681.1| putative auxin response factor ARF16 [Malus x dom...   231   4e-59

>ref|XP_004156337.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
          Length = 701

 Score =  234 bits (597), Expect = 5e-60
 Identities = 109/136 (80%), Positives = 113/136 (83%)
 Frame = +2

Query: 2   FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNADPPVQTILAKDVHGEVWKFRHIYRGT 181
           FAKTLTQSDANNGGGFSVPRYCAETIFPRLDY+ADPPVQTILAKDVHGE WKFRHIYRGT
Sbjct: 120 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGT 179

Query: 182 PRRHLLTTGWSTFVNHKKLIAGDSIVFLRTENGDLCXXXXXXXXXXXXXPELASGWNPPA 361
           PRRHLLTTGWSTFVNHKKL+AGDSIVFLR ENGDLC             PE + GWNP  
Sbjct: 180 PRRHLLTTGWSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGDGPESSCGWNPAG 239

Query: 362 GNCVPPYGGFSAFLKE 409
           GNC   YG FSAFL+E
Sbjct: 240 GNCAVSYGAFSAFLRE 255


>ref|XP_004143252.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
          Length = 698

 Score =  234 bits (597), Expect = 5e-60
 Identities = 109/136 (80%), Positives = 113/136 (83%)
 Frame = +2

Query: 2   FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNADPPVQTILAKDVHGEVWKFRHIYRGT 181
           FAKTLTQSDANNGGGFSVPRYCAETIFPRLDY+ADPPVQTILAKDVHGE WKFRHIYRGT
Sbjct: 120 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGT 179

Query: 182 PRRHLLTTGWSTFVNHKKLIAGDSIVFLRTENGDLCXXXXXXXXXXXXXPELASGWNPPA 361
           PRRHLLTTGWSTFVNHKKL+AGDSIVFLR ENGDLC             PE + GWNP  
Sbjct: 180 PRRHLLTTGWSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGDGPESSCGWNPAG 239

Query: 362 GNCVPPYGGFSAFLKE 409
           GNC   YG FSAFL+E
Sbjct: 240 GNCAVSYGAFSAFLRE 255


>ref|XP_002281486.1| PREDICTED: auxin response factor 18-like [Vitis vinifera]
          Length = 701

 Score =  233 bits (595), Expect = 9e-60
 Identities = 111/136 (81%), Positives = 113/136 (83%)
 Frame = +2

Query: 2   FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNADPPVQTILAKDVHGEVWKFRHIYRGT 181
           FAKTLTQSDANNGGGFSVPRYCAETIFPRLDY ADPPVQ ILAKDVHGE WKFRHIYRGT
Sbjct: 119 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQNILAKDVHGETWKFRHIYRGT 178

Query: 182 PRRHLLTTGWSTFVNHKKLIAGDSIVFLRTENGDLCXXXXXXXXXXXXXPELASGWNPPA 361
           PRRHLLTTGWSTFVNHKKLIAGDSIVFLR ENGDLC             PE +SGWNP  
Sbjct: 179 PRRHLLTTGWSTFVNHKKLIAGDSIVFLRAENGDLCVGIRRAKRGIGCGPESSSGWNPAG 238

Query: 362 GNCVPPYGGFSAFLKE 409
            N V PYGGFSAFL+E
Sbjct: 239 CNYVMPYGGFSAFLRE 254


>ref|XP_002519531.1| Auxin response factor, putative [Ricinus communis]
           gi|223541394|gb|EEF42945.1| Auxin response factor,
           putative [Ricinus communis]
          Length = 702

 Score =  232 bits (592), Expect = 2e-59
 Identities = 109/136 (80%), Positives = 114/136 (83%)
 Frame = +2

Query: 2   FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNADPPVQTILAKDVHGEVWKFRHIYRGT 181
           FAKTLTQSDANNGGGFSVPRYCAETIFPRLDY+ADPPVQTILAKDVHGE WKFRHIYRGT
Sbjct: 124 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGT 183

Query: 182 PRRHLLTTGWSTFVNHKKLIAGDSIVFLRTENGDLCXXXXXXXXXXXXXPELASGWNPPA 361
           PRRHLLTTGWSTFVNHKKL+AGDSIVFLR ENGDLC             PE  S WNP  
Sbjct: 184 PRRHLLTTGWSTFVNHKKLVAGDSIVFLRAENGDLCIGIRRAKRGVGGGPE--SSWNPAG 241

Query: 362 GNCVPPYGGFSAFLKE 409
           GNCV PYGGF++F +E
Sbjct: 242 GNCVMPYGGFNSFFRE 257


>gb|ACI13681.1| putative auxin response factor ARF16 [Malus x domestica]
          Length = 702

 Score =  231 bits (590), Expect = 4e-59
 Identities = 109/136 (80%), Positives = 114/136 (83%)
 Frame = +2

Query: 2   FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNADPPVQTILAKDVHGEVWKFRHIYRGT 181
           FAKTLTQSDANNGGGFSVPRYCAETIFPRLDY+ADPPVQTILAKDVHGE WKFRHIYRGT
Sbjct: 121 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGT 180

Query: 182 PRRHLLTTGWSTFVNHKKLIAGDSIVFLRTENGDLCXXXXXXXXXXXXXPELASGWNPPA 361
           PRRHLLTTG STFVNHKKL++GDSIVFLR ENGDLC              E +SGWNP  
Sbjct: 181 PRRHLLTTGSSTFVNHKKLVSGDSIVFLRAENGDLCVGIRRAKRGIGGGSESSSGWNPMG 240

Query: 362 GNCVPPYGGFSAFLKE 409
           GNC  PYGGFSAFL+E
Sbjct: 241 GNCTVPYGGFSAFLRE 256


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