BLASTX nr result

ID: Coptis23_contig00025352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025352
         (986 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_850466.2| uncharacterized protein [Arabidopsis thaliana] ...   159   8e-37
ref|NP_001189765.1| uncharacterized protein [Arabidopsis thalian...   158   2e-36
ref|XP_002320932.1| predicted protein [Populus trichocarpa] gi|2...   156   6e-36
ref|XP_003519725.1| PREDICTED: uncharacterized protein LOC100783...   141   3e-31
ref|XP_002882099.1| hypothetical protein ARALYDRAFT_483869 [Arab...   134   3e-29

>ref|NP_850466.2| uncharacterized protein [Arabidopsis thaliana]
            gi|110736851|dbj|BAF00383.1| hypothetical protein
            [Arabidopsis thaliana] gi|330255687|gb|AEC10781.1|
            uncharacterized protein [Arabidopsis thaliana]
          Length = 793

 Score =  159 bits (403), Expect = 8e-37
 Identities = 114/345 (33%), Positives = 177/345 (51%), Gaps = 17/345 (4%)
 Frame = -2

Query: 985  DPQYGAESPTLRMKATIKESFLNTSPKTIQEEQAIQSPVPDERRFVTKGFYNLRTLQKSK 806
            +P+   +SPT   KA I       SP+    +    SP  DE       F   +T Q   
Sbjct: 441  EPENEFQSPTFGYKAPISSPSPCCSPEASPLQPRNISPTLDETETPIFSFGTKKTSQ--- 497

Query: 805  RGSSGVNAETDSS---------DDTDDLKESPIPNME---SSPVMEEIDAKHKFFXXXXX 662
             G++G  ++T+           D +   + SP PN +   S P  +E D+          
Sbjct: 498  -GTTGQASDTEKRLPDFLEKKRDYSFRRESSPEPNEDLVLSDPSSDERDSDGS------- 549

Query: 661  XXXXXXXXDQHISKGRRGAQMWTAECNNTKISPSIICQNKRFCQDG---LGPTSPSQKGI 491
                      +IS   R    WT E   + + PS + +N      G   L P SP  KGI
Sbjct: 550  -REDSPVLGHNISPEERETANWTNE--RSMLGPSSVKRNSNLKGIGRVVLSPPSPLSKGI 606

Query: 490  LESSELEQPS--NQNNDDGMMSAVSLIAKALQSFKTRIQTQTSKKSCQILASLAEEXXXX 317
             ++   +  S  +++ D+G+  AV+L A ALQ+F+ ++++   KKS +I+AS++EE    
Sbjct: 607  DKTDSFQHCSEMDEDEDEGLGRAVALFAMALQNFERKLKSAAEKKSSEIIASVSEEIHLE 666

Query: 316  XXXXXXXXQREVLKFTNLGNSKRKSLETRFQEQHERLKSTQDKFKEEVAHHLKECKSTLE 137
                      E  K +NL  +KRK  ETR QEQ E+++   +KFK++V+HHL++ KST+E
Sbjct: 667  LENIKSHIITEAGKTSNLAKTKRKHAETRLQEQEEKMRMIHEKFKDDVSHHLEDFKSTIE 726

Query: 136  DLEAFQAELMGNAKRQKTSHQKLLAQAEKEIETQLNDADRRITAI 2
            +LEA Q+EL G+ K+Q+TSHQKL+A  E  IET+L+DA +RI ++
Sbjct: 727  ELEANQSELKGSIKKQRTSHQKLIAHFEGGIETKLDDATKRIDSV 771


>ref|NP_001189765.1| uncharacterized protein [Arabidopsis thaliana]
            gi|330255688|gb|AEC10782.1| uncharacterized protein
            [Arabidopsis thaliana]
          Length = 790

 Score =  158 bits (400), Expect = 2e-36
 Identities = 114/342 (33%), Positives = 175/342 (51%), Gaps = 17/342 (4%)
 Frame = -2

Query: 985  DPQYGAESPTLRMKATIKESFLNTSPKTIQEEQAIQSPVPDERRFVTKGFYNLRTLQKSK 806
            +P+   +SPT   KA I       SP+    +    SP  DE       F   +T Q   
Sbjct: 441  EPENEFQSPTFGYKAPISSPSPCCSPEASPLQPRNISPTLDETETPIFSFGTKKTSQ--- 497

Query: 805  RGSSGVNAETDSS---------DDTDDLKESPIPNME---SSPVMEEIDAKHKFFXXXXX 662
             G++G  ++T+           D +   + SP PN +   S P  +E D+          
Sbjct: 498  -GTTGQASDTEKRLPDFLEKKRDYSFRRESSPEPNEDLVLSDPSSDERDSDGS------- 549

Query: 661  XXXXXXXXDQHISKGRRGAQMWTAECNNTKISPSIICQNKRFCQDG---LGPTSPSQKGI 491
                      +IS   R    WT E   + + PS + +N      G   L P SP  KGI
Sbjct: 550  -REDSPVLGHNISPEERETANWTNE--RSMLGPSSVKRNSNLKGIGRVVLSPPSPLSKGI 606

Query: 490  LESSELEQPS--NQNNDDGMMSAVSLIAKALQSFKTRIQTQTSKKSCQILASLAEEXXXX 317
             ++   +  S  +++ D+G+  AV+L A ALQ+F+ ++++   KKS +I+AS++EE    
Sbjct: 607  DKTDSFQHCSEMDEDEDEGLGRAVALFAMALQNFERKLKSAAEKKSSEIIASVSEEIHLE 666

Query: 316  XXXXXXXXQREVLKFTNLGNSKRKSLETRFQEQHERLKSTQDKFKEEVAHHLKECKSTLE 137
                      E  K +NL  +KRK  ETR QEQ E+++   +KFK++V+HHL++ KST+E
Sbjct: 667  LENIKSHIITEAGKTSNLAKTKRKHAETRLQEQEEKMRMIHEKFKDDVSHHLEDFKSTIE 726

Query: 136  DLEAFQAELMGNAKRQKTSHQKLLAQAEKEIETQLNDADRRI 11
            +LEA Q+EL G+ K+Q+TSHQKL+A  E  IET+L+DA +RI
Sbjct: 727  ELEANQSELKGSIKKQRTSHQKLIAHFEGGIETKLDDATKRI 768


>ref|XP_002320932.1| predicted protein [Populus trichocarpa] gi|222861705|gb|EEE99247.1|
            predicted protein [Populus trichocarpa]
          Length = 798

 Score =  156 bits (395), Expect = 6e-36
 Identities = 105/328 (32%), Positives = 163/328 (49%)
 Frame = -2

Query: 985  DPQYGAESPTLRMKATIKESFLNTSPKTIQEEQAIQSPVPDERRFVTKGFYNLRTLQKSK 806
            +PQ   +SPT ++ +    SF ++ PK+ Q +Q I + + D     T      R ++   
Sbjct: 510  NPQDDFQSPTFKINSPTLSSFPSSMPKSDQRKQDIAAELMDSPPNKTLPVKGKRDVEGGL 569

Query: 805  RGSSGVNAETDSSDDTDDLKESPIPNMESSPVMEEIDAKHKFFXXXXXXXXXXXXXDQHI 626
              SS     ++SS+D              SP++                           
Sbjct: 570  SESSPECGYSESSED-------------GSPLV--------------------------- 589

Query: 625  SKGRRGAQMWTAECNNTKISPSIICQNKRFCQDGLGPTSPSQKGILESSELEQPSNQNND 446
             KGRR  +  + E    + S  ++   KRFC         + KGI+E+    + S QN  
Sbjct: 590  -KGRREEENCSTETATAEKSKFMLHPTKRFC---------NHKGIVETELTPEISEQNQG 639

Query: 445  DGMMSAVSLIAKALQSFKTRIQTQTSKKSCQILASLAEEXXXXXXXXXXXXQREVLKFTN 266
            D +   + L   AL++F+ +++ +T KKS  IL S++E+            Q ++ K ++
Sbjct: 640  DELERVILLFVMALENFRKKMKLETGKKSSDILVSVSEKMHLQLQNIESQIQTDLGKLSS 699

Query: 265  LGNSKRKSLETRFQEQHERLKSTQDKFKEEVAHHLKECKSTLEDLEAFQAELMGNAKRQK 86
            +  SKRK LE+RF+EQ E+LK   DKFK+++  HL+ECK TLE LE  Q +  G  K+QK
Sbjct: 700  VSKSKRKRLESRFEEQQEQLKLIHDKFKQDIYQHLQECKITLEGLELHQIDFKGTVKKQK 759

Query: 85   TSHQKLLAQAEKEIETQLNDADRRITAI 2
             SHQKLL QAE+ ++TQL+DA RRITA+
Sbjct: 760  ASHQKLLMQAEETVKTQLDDAQRRITAV 787


>ref|XP_003519725.1| PREDICTED: uncharacterized protein LOC100783804 [Glycine max]
          Length = 852

 Score =  141 bits (355), Expect = 3e-31
 Identities = 97/319 (30%), Positives = 164/319 (51%)
 Frame = -2

Query: 964  SPTLRMKATIKESFLNTSPKTIQEEQAIQSPVPDERRFVTKGFYNLRTLQKSKRGSSGVN 785
            SPT ++K+ I     N++PKT Q+E  + S    ER F     ++LRT Q S+   + + 
Sbjct: 419  SPTFQLKSPILSFSPNSTPKTGQKETDVNSLASTERTFSLGSIHSLRTPQASEPDFNRLG 478

Query: 784  AETDSSDDTDDLKESPIPNMESSPVMEEIDAKHKFFXXXXXXXXXXXXXDQHISKGRRGA 605
             +   S      + S + N +      E++                      I +  + +
Sbjct: 479  EQMQLSVSLSH-QRSQVDNFQCFG--PELEILRFCLLPFLIRFQDMEELKSFIPRKDKSS 535

Query: 604  QMWTAECNNTKISPSIICQNKRFCQDGLGPTSPSQKGILESSELEQPSNQNNDDGMMSAV 425
            +    E        S   +N +   +G G          +S  +++ S QN D G + AV
Sbjct: 536  ETEKKEQGGGSSDSSSEEENFQGYHEGTG----------DSDWIDEASEQNQD-GFVRAV 584

Query: 424  SLIAKALQSFKTRIQTQTSKKSCQILASLAEEXXXXXXXXXXXXQREVLKFTNLGNSKRK 245
             L+A  L   ++++++ TS+KS +IL S+AEE            Q ++ K T+LG SKRK
Sbjct: 585  ELLALELGKLQSKLKSMTSQKSSEILKSVAEEIHLQLQNVHTQIQTDMGKLTSLGKSKRK 644

Query: 244  SLETRFQEQHERLKSTQDKFKEEVAHHLKECKSTLEDLEAFQAELMGNAKRQKTSHQKLL 65
             +ETRF++Q ++L+   ++FKEEV  HL++C+ST+EDLEA Q E+    ++Q+ +H+KLL
Sbjct: 645  RMETRFEDQQKQLRLIYNRFKEEVNQHLQDCRSTVEDLEADQIEIKRAMEKQRVAHKKLL 704

Query: 64   AQAEKEIETQLNDADRRIT 8
            +Q E+ ++ QL+DA R+IT
Sbjct: 705  SQVEEAVQIQLDDAQRKIT 723


>ref|XP_002882099.1| hypothetical protein ARALYDRAFT_483869 [Arabidopsis lyrata subsp.
            lyrata] gi|297327938|gb|EFH58358.1| hypothetical protein
            ARALYDRAFT_483869 [Arabidopsis lyrata subsp. lyrata]
          Length = 789

 Score =  134 bits (337), Expect = 3e-29
 Identities = 71/173 (41%), Positives = 112/173 (64%), Gaps = 2/173 (1%)
 Frame = -2

Query: 523  LGPTSPSQKGILESSELEQPS--NQNNDDGMMSAVSLIAKALQSFKTRIQTQTSKKSCQI 350
            L P S   KGI ++   +  S  +++ D+G+  AV+L A ALQ+ + ++++   KKS +I
Sbjct: 595  LSPPSSLSKGIDKTDSFQHCSEMDEDEDEGLGRAVALFAMALQNIEKKLKSAAEKKSSEI 654

Query: 349  LASLAEEXXXXXXXXXXXXQREVLKFTNLGNSKRKSLETRFQEQHERLKSTQDKFKEEVA 170
            +AS++EE              E  K +NL  +KRK  ETR QEQ E+++   +KFK++V+
Sbjct: 655  IASVSEEIHLELENVKSHIITEAGKTSNLAKTKRKHAETRLQEQQEKMRMIHEKFKDDVS 714

Query: 169  HHLKECKSTLEDLEAFQAELMGNAKRQKTSHQKLLAQAEKEIETQLNDADRRI 11
            HHL++ KST+E+LE   +EL G+ K+Q+TSHQKL+A  E  IET+L++A +RI
Sbjct: 715  HHLEDFKSTIEELEGNHSELKGSIKKQRTSHQKLIAHFEGGIETKLDNATKRI 767


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