BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025348
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36552.3| unnamed protein product [Vitis vinifera]              198   3e-49
ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containi...   198   3e-49
ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   190   1e-46
ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containi...   190   1e-46
ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containi...   187   8e-46

>emb|CBI36552.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score =  198 bits (504), Expect = 3e-49
 Identities = 99/118 (83%), Positives = 105/118 (88%)
 Frame = -1

Query: 355 KTPGCTLIELGETLYIFTSGDKSHPQSVAIYAELEKLTAKMREAGFKAETEMAFHDVEEE 176
           KTPGCTLIE+  TL+IFTSGD+SHPQ+ AIYA LEKLT KMREAGF+ ET  A HDVEEE
Sbjct: 590 KTPGCTLIEVANTLHIFTSGDQSHPQATAIYAMLEKLTGKMREAGFQTETGTALHDVEEE 649

Query: 175 EKEQMVNVHSEKLAIAFGLINTNPGTEIRIIKNLRVCLDCHNATKFISKITERVIVVR 2
           EKE MV VHSEKLAIAFGLI + PGTEIRIIKNLRVCLDCHNATKFISKITERVIVVR
Sbjct: 650 EKELMVKVHSEKLAIAFGLITSEPGTEIRIIKNLRVCLDCHNATKFISKITERVIVVR 707


>ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
           [Vitis vinifera]
          Length = 781

 Score =  198 bits (504), Expect = 3e-49
 Identities = 99/118 (83%), Positives = 105/118 (88%)
 Frame = -1

Query: 355 KTPGCTLIELGETLYIFTSGDKSHPQSVAIYAELEKLTAKMREAGFKAETEMAFHDVEEE 176
           KTPGCTLIE+  TL+IFTSGD+SHPQ+ AIYA LEKLT KMREAGF+ ET  A HDVEEE
Sbjct: 645 KTPGCTLIEVANTLHIFTSGDQSHPQATAIYAMLEKLTGKMREAGFQTETGTALHDVEEE 704

Query: 175 EKEQMVNVHSEKLAIAFGLINTNPGTEIRIIKNLRVCLDCHNATKFISKITERVIVVR 2
           EKE MV VHSEKLAIAFGLI + PGTEIRIIKNLRVCLDCHNATKFISKITERVIVVR
Sbjct: 705 EKELMVKVHSEKLAIAFGLITSEPGTEIRIIKNLRVCLDCHNATKFISKITERVIVVR 762


>ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  190 bits (482), Expect = 1e-46
 Identities = 95/119 (79%), Positives = 105/119 (88%), Gaps = 1/119 (0%)
 Frame = -1

Query: 355  KTPGCTLIELGETLYIFTSGDKSHPQSVAIYAELEKLTAKMREAGFKAET-EMAFHDVEE 179
            KTPGCTLIE+ +  Y+FTSGD+SHPQ+ AI+  LEKLT KMREAG++AET   A HDVE+
Sbjct: 651  KTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVED 710

Query: 178  EEKEQMVNVHSEKLAIAFGLINTNPGTEIRIIKNLRVCLDCHNATKFISKITERVIVVR 2
            EEKE MVNVHSEKLAIAFGLI+T PGTEIRIIKNLRVCLDCH ATKFISKITERVIVVR
Sbjct: 711  EEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVR 769


>ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700-like
            [Cucumis sativus]
          Length = 788

 Score =  190 bits (482), Expect = 1e-46
 Identities = 95/119 (79%), Positives = 105/119 (88%), Gaps = 1/119 (0%)
 Frame = -1

Query: 355  KTPGCTLIELGETLYIFTSGDKSHPQSVAIYAELEKLTAKMREAGFKAET-EMAFHDVEE 179
            KTPGCTLIE+ +  Y+FTSGD+SHPQ+ AI+  LEKLT KMREAG++AET   A HDVE+
Sbjct: 651  KTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVED 710

Query: 178  EEKEQMVNVHSEKLAIAFGLINTNPGTEIRIIKNLRVCLDCHNATKFISKITERVIVVR 2
            EEKE MVNVHSEKLAIAFGLI+T PGTEIRIIKNLRVCLDCH ATKFISKITERVIVVR
Sbjct: 711  EEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVR 769


>ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700-like
            [Brachypodium distachyon]
          Length = 796

 Score =  187 bits (475), Expect = 8e-46
 Identities = 90/119 (75%), Positives = 105/119 (88%)
 Frame = -1

Query: 358  VKTPGCTLIELGETLYIFTSGDKSHPQSVAIYAELEKLTAKMREAGFKAETEMAFHDVEE 179
            VKTPGCTLIE+G+  ++F +GD++HPQS AIY  LEKLTAKM EAG++ +TE A +DVEE
Sbjct: 659  VKTPGCTLIEIGDRPHVFMAGDRAHPQSDAIYLYLEKLTAKMIEAGYRPDTEAALYDVEE 718

Query: 178  EEKEQMVNVHSEKLAIAFGLINTNPGTEIRIIKNLRVCLDCHNATKFISKITERVIVVR 2
            EEKE MV VHSEKLAIAFGL+NT PGTEIRIIKNLRVCLDCHNATK ISK+T+R+IVVR
Sbjct: 719  EEKEHMVKVHSEKLAIAFGLLNTEPGTEIRIIKNLRVCLDCHNATKIISKVTQRLIVVR 777