BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025337
         (551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524955.1| ubiquitin-protein ligase, putative [Ricinus ...   142   3e-32
ref|XP_002283956.2| PREDICTED: U-box domain-containing protein 4...   135   4e-30
ref|XP_003551173.1| PREDICTED: U-box domain-containing protein 4...   135   6e-30
ref|XP_003538329.1| PREDICTED: U-box domain-containing protein 4...   129   3e-28
ref|XP_002306495.1| predicted protein [Populus trichocarpa] gi|2...   127   9e-28

>ref|XP_002524955.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223535790|gb|EEF37452.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 799

 Score =  142 bits (358), Expect = 3e-32
 Identities = 94/187 (50%), Positives = 112/187 (59%), Gaps = 5/187 (2%)
 Frame = -3

Query: 549 LGLTVCPKTRQILVHTHLIPNHTVKALIANWCETNNVNIHDPVKSMNLNQSSALSSYACF 370
           LGLTVCPKTRQ L HT+LIPN+TVKALIANWCE+NNV + DPVKS++ NQ SAL  +A  
Sbjct: 234 LGLTVCPKTRQTLAHTNLIPNYTVKALIANWCESNNVKLPDPVKSVSFNQPSALLIHAES 293

Query: 369 G-PSESH-ILPRQNHPFARTNHVRSTSSLHENVLSSSGTDLGRKSPSHTSSDLEGALNGE 196
           G P  SH    R N P +     RST S   N +SSS       SP H  S  + +L+G 
Sbjct: 294 GTPRGSHGFYSRGNQPMS-PESTRSTDSPDRNWISSS-VHRESTSPCHPRSTSDSSLSGI 351

Query: 195 VGNGFGLDVCRISLGSSEDRDAKVEYRNMGSAGQPLGSSKVDNPEANG---SDEEFQRHS 25
           VGN  GLD+ RISL SSE+R   +E RN  S G     S   N  +N     +   Q HS
Sbjct: 352 VGNEQGLDMARISLASSEERSVNLEGRNRDS-GVRHSVSPSRNEVSNAVRVGEPIAQSHS 410

Query: 24  QNASVSS 4
           +NAS SS
Sbjct: 411 RNASASS 417


>ref|XP_002283956.2| PREDICTED: U-box domain-containing protein 4-like [Vitis vinifera]
          Length = 809

 Score =  135 bits (340), Expect = 4e-30
 Identities = 83/177 (46%), Positives = 106/177 (59%), Gaps = 4/177 (2%)
 Frame = -3

Query: 549 LGLTVCPKTRQILVHTHLIPNHTVKALIANWCETNNVNIHDPVKSMNLNQSSALSSYACF 370
           LGLTVCPKTRQ L HT+LIPN+TVKALIANWCE+NNV + DPVKS+NLNQSS L ++A  
Sbjct: 272 LGLTVCPKTRQTLAHTNLIPNYTVKALIANWCESNNVKLPDPVKSLNLNQSSPLLAHAEP 331

Query: 369 G-PSESHILP--RQNHPFARTNHVRSTSSLHENVLSSSGTDLGRKSPSHTSSDLEGALNG 199
           G P ++H +P  R + P +     R T S   N++SS G      SPSH  S  EG+L+G
Sbjct: 332 GAPRDAHNVPHSRASQPMS-PESTRFTGSPGNNLVSSGGIHREGTSPSHPRSRSEGSLSG 390

Query: 198 EVGNGFGLDVCRISLGSSEDRDAKVEYRNMGSAGQPLG-SSKVDNPEANGSDEEFQR 31
             GNG G D               +E R+M S GQP    S+ ++  + G+D    R
Sbjct: 391 VAGNGHGSD---------------IEDRSMDSVGQPSTLPSRKESSNSTGADANLCR 432


>ref|XP_003551173.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 841

 Score =  135 bits (339), Expect = 6e-30
 Identities = 85/185 (45%), Positives = 105/185 (56%), Gaps = 3/185 (1%)
 Frame = -3

Query: 549 LGLTVCPKTRQILVHTHLIPNHTVKALIANWCETNNVNIHDPVKSMNLNQSSALSSYACF 370
           LGLTVCPKTRQ LVHTHLIPN+TVKALIANWCE+NNV + DP KS NLNQ+S L  Y   
Sbjct: 275 LGLTVCPKTRQTLVHTHLIPNYTVKALIANWCESNNVQLVDPTKSTNLNQASVLHGYMES 334

Query: 369 GPS-ESHIL--PRQNHPFARTNHVRSTSSLHENVLSSSGTDLGRKSPSHTSSDLEGALNG 199
           G + ES +    R N P +  +    + S   N L+S GT     SP H  S  EG+  G
Sbjct: 335 GTTRESPVFAHSRSNQPSSPESARSCSFSSPANNLTSGGTQREGTSPLHPRSTSEGSFRG 394

Query: 198 EVGNGFGLDVCRISLGSSEDRDAKVEYRNMGSAGQPLGSSKVDNPEANGSDEEFQRHSQN 19
            V NG  +D+ RIS    +DR A  +  ++ SA  P  S       +  S E+ Q H + 
Sbjct: 395 MV-NGQYMDLARISPEGLDDRSASSDESSVDSASHPSMSPSRRESSSAFSSEQSQTHIRA 453

Query: 18  ASVSS 4
            S SS
Sbjct: 454 VSDSS 458


>ref|XP_003538329.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 838

 Score =  129 bits (324), Expect = 3e-28
 Identities = 82/185 (44%), Positives = 103/185 (55%), Gaps = 3/185 (1%)
 Frame = -3

Query: 549 LGLTVCPKTRQILVHTHLIPNHTVKALIANWCETNNVNIHDPVKSMNLNQSSALSSYACF 370
           LGLTVC KTRQ LVHT+LIPN+TVKALIANWCE+NNV + DP KS NLNQ+  L  Y   
Sbjct: 272 LGLTVCAKTRQTLVHTNLIPNYTVKALIANWCESNNVQLVDPTKSTNLNQACVLHGYMES 331

Query: 369 G---PSESHILPRQNHPFARTNHVRSTSSLHENVLSSSGTDLGRKSPSHTSSDLEGALNG 199
           G    S   +  R N P +  +    + S   N L+S GT     SP H  S  EG+L+G
Sbjct: 332 GTTRESPVFVHSRSNQPSSPESAGSRSFSSPANNLTSGGTQREGTSPLHPRSTSEGSLSG 391

Query: 198 EVGNGFGLDVCRISLGSSEDRDAKVEYRNMGSAGQPLGSSKVDNPEANGSDEEFQRHSQN 19
            V NG  +D+ RIS    +DR A  +  ++ SA  P  S       +  S E+ Q H + 
Sbjct: 392 MV-NGQYMDLARISPEGLDDRSASSDESSVDSASHPSMSPSRRESSSAFSSEQSQTHIRA 450

Query: 18  ASVSS 4
            S SS
Sbjct: 451 VSDSS 455


>ref|XP_002306495.1| predicted protein [Populus trichocarpa] gi|222855944|gb|EEE93491.1|
           predicted protein [Populus trichocarpa]
          Length = 822

 Score =  127 bits (320), Expect = 9e-28
 Identities = 84/185 (45%), Positives = 111/185 (60%), Gaps = 3/185 (1%)
 Frame = -3

Query: 549 LGLTVCPKTRQILVHTHLIPNHTVKALIANWCETNNVNIHDPVKSMNLNQSSALSSYACF 370
           LGLTVCPKT+Q L HT+LI N+TVKALIANWCE+NNV + DP+KSM+ NQ S L   +  
Sbjct: 274 LGLTVCPKTQQTLAHTNLITNYTVKALIANWCESNNVKLPDPIKSMSFNQPSPLLPIS-- 331

Query: 369 GPSESHILPRQNHPFARTNHVRSTSSLHENVLSSSGTDLGRKSPSHTSSDLEGALNGEVG 190
             SES+               ++T S  +N++SSSG      SP H+ S  E +L+  VG
Sbjct: 332 --SESN---------------QATGSPGQNMISSSGIQREGSSPLHSHSTSESSLSVIVG 374

Query: 189 NGFGLDVCRI-SLGSSEDRDAKVEYRNMGSAGQPLGS-SKVDNPEANGSDEEF-QRHSQN 19
           NG GLD+ RI SL SSE+R +  E RN+ S      S S+ +   A  +D    Q H+++
Sbjct: 375 NGQGLDIARISSLTSSEERSSNSEERNLDSVHHCSASPSRKEVSTAVRADGLLSQNHNRS 434

Query: 18  ASVSS 4
           AS SS
Sbjct: 435 ASASS 439