BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00025336
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306495.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
ref|XP_002524955.1| ubiquitin-protein ligase, putative [Ricinus ...   127   9e-28
ref|XP_003551173.1| PREDICTED: U-box domain-containing protein 4...   107   1e-21
ref|XP_003538329.1| PREDICTED: U-box domain-containing protein 4...   107   1e-21
ref|XP_002283956.2| PREDICTED: U-box domain-containing protein 4...   105   4e-21

>ref|XP_002306495.1| predicted protein [Populus trichocarpa] gi|222855944|gb|EEE93491.1|
           predicted protein [Populus trichocarpa]
          Length = 822

 Score =  130 bits (326), Expect = 1e-28
 Identities = 69/140 (49%), Positives = 99/140 (70%), Gaps = 1/140 (0%)
 Frame = -3

Query: 418 SVSSTIYNSDYVQGTPGGANGVSQVSDDLSHYNGNASGELIPESTSRASL-LPHSEREFS 242
           S SS + ++ + QG  G AN  S+ S+ L+ Y+ + SGE+ PE  + ++L  PH E EF 
Sbjct: 436 SASSALGHAAFPQGASGDANESSEFSNHLTSYSSDISGEVKPEPQASSALHTPHREPEFP 495

Query: 241 PGVMATWSSSHPIWRQPTEQYVPRIITSSAIDTSVDILGIETQVKKLVEDMQSTSVDLQR 62
             ++ T S S  IWR+P+++ VPRI++SSAI+T  D+ GIET+V+ LVED++ST VD QR
Sbjct: 496 SRLVDTRSRSQTIWRRPSDRLVPRIVSSSAIETRADLAGIETEVRNLVEDLKSTLVDTQR 555

Query: 61  AATSELRLLAKDTVDNRIVI 2
            AT++LRLLAK  +DNRIVI
Sbjct: 556 DATAKLRLLAKHNMDNRIVI 575


>ref|XP_002524955.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223535790|gb|EEF37452.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 799

 Score =  127 bits (319), Expect = 9e-28
 Identities = 67/142 (47%), Positives = 98/142 (69%), Gaps = 3/142 (2%)
 Frame = -3

Query: 418 SVSSTIYNSDYVQGTPGGANGVSQVSDDLSHYNGNASGELIPE---STSRASLLPHSERE 248
           + S++  N+ + QG     N  S+V + L+ Y+ + SGE+  E   ST+  S  PH E E
Sbjct: 412 NASASSINASFSQGAQVDTNDSSEVLNHLTSYSSDNSGEVKAETQASTALNSPRPHREPE 471

Query: 247 FSPGVMATWSSSHPIWRQPTEQYVPRIITSSAIDTSVDILGIETQVKKLVEDMQSTSVDL 68
           F+P  + T S S  IWR+P+++ +PRI++S AI+T  D+ G+ETQV+ LVED++S S+D+
Sbjct: 472 FAPRFIETRSRSQTIWRRPSDRLIPRIVSSPAIETRADLSGVETQVRNLVEDLKSDSIDV 531

Query: 67  QRAATSELRLLAKDTVDNRIVI 2
           QRAAT+ELRLLAK  +DNRIVI
Sbjct: 532 QRAATAELRLLAKHNMDNRIVI 553


>ref|XP_003551173.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 841

 Score =  107 bits (267), Expect = 1e-21
 Identities = 65/142 (45%), Positives = 90/142 (63%), Gaps = 3/142 (2%)
 Frame = -3

Query: 418 SVSSTIYNSDYVQGTPGGANGVSQVSDDLSHYNGNASGELIPES-TSRASLLP--HSERE 248
           S SS + N+++ Q T    N   Q+S    H +  ASGEL P + T   + +P  H E E
Sbjct: 455 SDSSALSNANFPQETQDDDNNAPQLSTSAGH-SREASGELNPGTETGGTTAVPSVHREPE 513

Query: 247 FSPGVMATWSSSHPIWRQPTEQYVPRIITSSAIDTSVDILGIETQVKKLVEDMQSTSVDL 68
           F P  + T S S  IWR+P+E++VPRI++S  ++T  D+  IETQV+ LVE ++S+ VD 
Sbjct: 514 F-PLRLETRSRSQAIWRRPSERHVPRIVSSPVVETRADLSAIETQVRNLVEGLRSSDVDT 572

Query: 67  QRAATSELRLLAKDTVDNRIVI 2
           QR AT+ELRLLAK  +DNRI I
Sbjct: 573 QREATAELRLLAKHNMDNRIAI 594


>ref|XP_003538329.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 838

 Score =  107 bits (267), Expect = 1e-21
 Identities = 67/144 (46%), Positives = 91/144 (63%), Gaps = 5/144 (3%)
 Frame = -3

Query: 418 SVSSTIYNSDYVQGTPGGANGVSQVSDDLSHYNGNASGELIPE-----STSRASLLPHSE 254
           S SS + N+++ Q T    N   Q+S    H +  ASGEL P      +TS AS+  H E
Sbjct: 452 SDSSALSNANFPQETEDDNNNAPQLSTSAGH-SREASGELNPGPETAGTTSVASV--HRE 508

Query: 253 REFSPGVMATWSSSHPIWRQPTEQYVPRIITSSAIDTSVDILGIETQVKKLVEDMQSTSV 74
            EF P  + T S S  IWR+P+E++VPRI++S  ++T  D+  IETQV+ LVE ++S+ V
Sbjct: 509 PEF-PLRLETRSRSQAIWRRPSERHVPRIVSSPVVETRADLSAIETQVRNLVEGLKSSDV 567

Query: 73  DLQRAATSELRLLAKDTVDNRIVI 2
           D QR AT+ELRLLAK  +DNRI I
Sbjct: 568 DTQREATAELRLLAKHNMDNRIAI 591


>ref|XP_002283956.2| PREDICTED: U-box domain-containing protein 4-like [Vitis vinifera]
          Length = 809

 Score =  105 bits (262), Expect = 4e-21
 Identities = 61/140 (43%), Positives = 89/140 (63%), Gaps = 1/140 (0%)
 Frame = -3

Query: 418 SVSSTIYNSDYVQGTPGGANGVSQVSDDLSHYNGNASGELIPESTSRASLLPHSEREFS- 242
           S S+   N++  +GT G   GV         Y+ + SGE+ PE  + A+ L   +RE   
Sbjct: 435 SASTLPCNANSSEGTLGADIGV---------YSSDVSGEMTPEPQAAAANLTTPQREPDF 485

Query: 241 PGVMATWSSSHPIWRQPTEQYVPRIITSSAIDTSVDILGIETQVKKLVEDMQSTSVDLQR 62
           P  + T + S  +WR+P+E++VPRI++S   +T  D+ G+E QV++LVED++S SV+ QR
Sbjct: 486 PLRLETRARSQAMWRRPSERFVPRIVSSPTTETRADLSGVEAQVQRLVEDLKSESVETQR 545

Query: 61  AATSELRLLAKDTVDNRIVI 2
            ATSELRLLAK  +DNRIVI
Sbjct: 546 EATSELRLLAKHNMDNRIVI 565